RNA–Protein interactions for RNA: ENST00000361162.10

RBM39-203, Transcript of RNA binding motif protein 39, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBM39, Length 2,831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-203ENST00000361162 DDX19BQ9UMR2 479 aa15.15■□□□□ 0.02
RBM39-203ENST00000361162 PHRF1Q9P1Y6 1649 aaKnown RBP15.15■□□□□ 0.02
RBM39-203ENST00000361162 ZSCAN23Q3MJ62 389 aa15.14■□□□□ 0.01
RBM39-203ENST00000361162 ATF7IPQ6VMQ6 1270 aa15.14■□□□□ 0.01
RBM39-203ENST00000361162 CHD1LQ86WJ1 897 aa15.14■□□□□ 0.01
RBM39-203ENST00000361162 SSH2Q76I76 1423 aa15.14■□□□□ 0.01
RBM39-203ENST00000361162 NUCB1Q02818 461 aa15.13■□□□□ 0.01
RBM39-203ENST00000361162 FOXD4L5Q5VV16 416 aaPredicted RBP15.13■□□□□ 0.01
RBM39-203ENST00000361162 FOXD4L4Q8WXT5 416 aaPredicted RBP15.13■□□□□ 0.01
RBM39-203ENST00000361162 TSC1Q92574 1164 aa15.13■□□□□ 0.01
RBM39-203ENST00000361162 PPIP5K1Q6PFW1 1433 aa15.13■□□□□ 0.01
RBM39-203ENST00000361162 PLEKHG3A1L390 1219 aa15.13■□□□□ 0.01
RBM39-203ENST00000361162 TBC1D9Q6ZT07 1266 aa15.13■□□□□ 0.01
RBM39-203ENST00000361162 TERF2IPQ9NYB0 399 aa15.12■□□□□ 0.01
RBM39-203ENST00000361162 NOL7Q9UMY1 257 aaKnown RBP15.12■□□□□ 0.01
RBM39-203ENST00000361162 NSD3Q9BZ95 1437 aa15.12■□□□□ 0.01
RBM39-203ENST00000361162 A0A1W2PP64 1363 aa15.12■□□□□ 0.01
RBM39-203ENST00000361162 PRPF40AO75400 957 aaKnown RBP15.12■□□□□ 0.01
RBM39-203ENST00000361162 RNF214Q8ND24 703 aa15.12■□□□□ 0.01
RBM39-203ENST00000361162 ZBTB40Q9NUA8 1239 aa15.12■□□□□ 0.01
RBM39-203ENST00000361162 CDK19Q9BWU1 502 aa15.12■□□□□ 0.01
RBM39-203ENST00000361162 TRPM3Q9HCF6 1732 aaPredicted RBP15.12■□□□□ 0.01
RBM39-203ENST00000361162 MARF1Q9Y4F3 1742 aaKnown RBP15.12■□□□□ 0.01
RBM39-203ENST00000361162 RGPD8O14715 1765 aaPredicted RBP15.11■□□□□ 0.01
RBM39-203ENST00000361162 U2SURPO15042 1029 aaKnown RBP15.11■□□□□ 0.01
RBM39-203ENST00000361162 IQSEC2Q5JU85 1478 aa15.09■□□□□ 0.01
RBM39-203ENST00000361162 LMBRD1Q9NUN5 540 aa15.09■□□□□ 0.01
RBM39-203ENST00000361162 SHPRHQ149N8 1683 aa15.09■□□□□ 0.01
RBM39-203ENST00000361162 ABCC6O95255 1503 aa15.09■□□□□ 0.01
RBM39-203ENST00000361162 PTMSP20962 102 aa15.09■□□□□ 0.01
RBM39-203ENST00000361162 STK26Q9P289 416 aa15.09■□□□□ 0.01
RBM39-203ENST00000361162 AK9Q5TCS8 1911 aa15.08■□□□□ 0.01
RBM39-203ENST00000361162 FAM177BA6PVY3 158 aa15.08■□□□□ 0
RBM39-203ENST00000361162 ZNF500O60304 480 aaPredicted RBP15.08■□□□□ 0
RBM39-203ENST00000361162 NSFL1CQ9UNZ2 370 aaKnown RBP15.08■□□□□ 0
RBM39-203ENST00000361162 CCDC61Q9Y6R9 512 aa15.08■□□□□ 0
RBM39-203ENST00000361162 USP6P35125 1406 aa15.07■□□□□ 0
RBM39-203ENST00000361162 SYCE3A1L190 88 aa15.07■□□□□ 0
RBM39-203ENST00000361162 ZNF445P59923 1031 aa15.07■□□□□ 0
RBM39-203ENST00000361162 BMP2KLQ5H9B9 411 aa15.07■□□□□ 0
RBM39-203ENST00000361162 HDGFL2Q7Z4V5 671 aaPredicted RBP15.07■□□□□ 0
RBM39-203ENST00000361162 MAP7D2Q96T17 732 aa15.07■□□□□ 0
RBM39-203ENST00000361162 MED1Q15648 1581 aaPredicted RBP15.07■□□□□ 0
RBM39-203ENST00000361162 USP31Q70CQ4 1352 aa15.07■□□□□ 0
RBM39-203ENST00000361162 MINK1Q8N4C8 1332 aaPredicted RBP15.07■□□□□ 0
RBM39-203ENST00000361162 CFAP53Q96M91 514 aa15.07■□□□□ 0
RBM39-203ENST00000361162 SLC26A8Q96RN1 970 aa15.07■□□□□ 0
RBM39-203ENST00000361162 ZKSCAN5Q9Y2L8 839 aa15.07■□□□□ 0
RBM39-203ENST00000361162 PIK3C2AO00443 1686 aa15.07■□□□□ 0
RBM39-203ENST00000361162 AATKQ6ZMQ8 1374 aa15.07■□□□□ 0
RBM39-203ENST00000361162 TERF1P54274 439 aa15.07■□□□□ 0
RBM39-203ENST00000361162 ZGPATQ8N5A5 531 aaKnown RBP15.07■□□□□ 0
RBM39-203ENST00000361162 GPT2Q8TD30 523 aa15.07■□□□□ 0
RBM39-203ENST00000361162 SENP3Q9H4L4 574 aaPredicted RBP15.07■□□□□ 0
RBM39-203ENST00000361162 TTC21AQ8NDW8 1320 aa15.06■□□□□ 0
RBM39-203ENST00000361162 NCKAP5LQ9HCH0 1330 aa15.06■□□□□ 0
RBM39-203ENST00000361162 CCDC27Q2M243 656 aa15.06■□□□□ 0
RBM39-203ENST00000361162 PDLIM2Q96JY6 352 aa15.06■□□□□ 0
RBM39-203ENST00000361162 ALS2Q96Q42 1657 aa15.05■□□□□ 0
RBM39-203ENST00000361162 WAPLQ7Z5K2 1190 aa15.05■□□□□ 0
RBM39-203ENST00000361162 SRPK2P78362 688 aaKnown RBP15.05■□□□□ -0
RBM39-203ENST00000361162 TPRNQ4KMQ1 711 aa15.05■□□□□ -0
RBM39-203ENST00000361162 DNTTIP2Q5QJE6 756 aaKnown RBP15.05■□□□□ -0
RBM39-203ENST00000361162 OVOS2A0A0J9YW53 1432 aa15.05■□□□□ -0
RBM39-203ENST00000361162 OVOS2Q6IE36 1432 aa15.05■□□□□ -0
RBM39-203ENST00000361162 KIF16BQ96L93 1317 aa15.04■□□□□ -0
RBM39-203ENST00000361162 TMEM63CQ9P1W3 806 aa15.04■□□□□ -0
RBM39-203ENST00000361162 NHSL1Q5SYE7 1610 aa15.04■□□□□ -0
RBM39-203ENST00000361162 ELL2O00472 640 aaPredicted RBP15.04■□□□□ -0
RBM39-203ENST00000361162 FOXD4L6Q3SYB3 417 aaPredicted RBP15.04■□□□□ -0
RBM39-203ENST00000361162 FOXD4L3Q6VB84 417 aaPredicted RBP15.04■□□□□ -0
RBM39-203ENST00000361162 NUDT16Q96DE0 195 aaKnown RBP15.04■□□□□ -0
RBM39-203ENST00000361162 ZNF830Q96NB3 372 aaPredicted RBP15.04■□□□□ -0
RBM39-203ENST00000361162 TRIM35Q9UPQ4 493 aa15.04■□□□□ -0
RBM39-203ENST00000361162 PRR36Q9H6K5 1346 aa15.04■□□□□ -0
RBM39-203ENST00000361162 DYNC1I1O14576 645 aa15.03■□□□□ -0
RBM39-203ENST00000361162 PTMAP06454 111 aaKnown RBP15.03■□□□□ -0
RBM39-203ENST00000361162 KIF24Q5T7B8 1368 aa15.03■□□□□ -0
RBM39-203ENST00000361162 CRYBG1Q9Y4K1 1723 aa15.03■□□□□ -0
RBM39-203ENST00000361162 TMPOP42166 694 aaKnown RBP15.03■□□□□ -0
RBM39-203ENST00000361162 HS1BP3Q53T59 392 aa15.03■□□□□ -0
RBM39-203ENST00000361162 SMAP1Q8IYB5 467 aaPredicted RBP15.03■□□□□ -0
RBM39-203ENST00000361162 CABP2Q9NPB3 220 aa15.03■□□□□ -0
RBM39-203ENST00000361162 COL3A1P02461 1466 aaPredicted RBP15.03■□□□□ -0
RBM39-203ENST00000361162 LTBP4Q8N2S1 1624 aa15.03■□□□□ -0
RBM39-203ENST00000361162 CBX1P83916 185 aa15.02■□□□□ -0
RBM39-203ENST00000361162 CLEC17AQ6ZS10 378 aa15.02■□□□□ -0
RBM39-203ENST00000361162 CDK12Q9NYV4 1490 aaPredicted RBP15.02■□□□□ -0
RBM39-203ENST00000361162 SLIT3O75094 1523 aa15.02■□□□□ -0
RBM39-203ENST00000361162 SASS6Q6UVJ0 657 aa15.02□□□□□ -0.01
RBM39-203ENST00000361162 IBTKQ9P2D0 1353 aaPredicted RBP15.01□□□□□ -0.01
RBM39-203ENST00000361162 NCBP3Q53F19 620 aaKnown RBP15.01□□□□□ -0.01
RBM39-203ENST00000361162 C16orf71Q8IYS4 520 aaPredicted RBP15.01□□□□□ -0.01
RBM39-203ENST00000361162 C17orf53Q8N3J3 647 aaPredicted RBP15.01□□□□□ -0.01
RBM39-203ENST00000361162 ZDHHC9Q9Y397 364 aa15.01□□□□□ -0.01
RBM39-203ENST00000361162 APBB1O00213 710 aa15□□□□□ -0.01
RBM39-203ENST00000361162 IPO8O15397 1037 aaKnown RBP15□□□□□ -0.01
RBM39-203ENST00000361162 NUCB2P80303 420 aa15□□□□□ -0.01
RBM39-203ENST00000361162 SIRT2Q8IXJ6 389 aa15□□□□□ -0.01
RBM39-203ENST00000361162 C1orf167Q5SNV9 1468 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms