RNA–Protein interactions for RNA: ENST00000360540.9

PCMTD1-201, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCMTD1, Length 4,252 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-201ENST00000360540 VPS37DQ86XT2 251 aa16.92■□□□□ 0.3
PCMTD1-201ENST00000360540 PHF8Q9UPP1 1060 aa16.92■□□□□ 0.3
PCMTD1-201ENST00000360540 SPG7Q9UQ90 795 aa16.92■□□□□ 0.3
PCMTD1-201ENST00000360540 A0A1W2PP64 1363 aa16.91■□□□□ 0.3
PCMTD1-201ENST00000360540 PPFIA3O75145 1194 aa16.91■□□□□ 0.3
PCMTD1-201ENST00000360540 CYP46A1Q9Y6A2 500 aa16.91■□□□□ 0.3
PCMTD1-201ENST00000360540 COL17A1Q9UMD9 1497 aaPredicted RBP16.91■□□□□ 0.3
PCMTD1-201ENST00000360540 FKBP4Q02790 459 aaKnown RBP eCLIP16.91■□□□□ 0.3
PCMTD1-201ENST00000360540 SASS6Q6UVJ0 657 aa16.91■□□□□ 0.3
PCMTD1-201ENST00000360540 POLR3AO14802 1390 aaPredicted RBP16.91■□□□□ 0.3
PCMTD1-201ENST00000360540 AKAP17AQ02040 695 aaKnown RBP16.91■□□□□ 0.3
PCMTD1-201ENST00000360540 SYNE3Q6ZMZ3 975 aa16.91■□□□□ 0.3
PCMTD1-201ENST00000360540 SDF4Q9BRK5 362 aa16.91■□□□□ 0.3
PCMTD1-201ENST00000360540 SYCE3A1L190 88 aa16.9■□□□□ 0.3
PCMTD1-201ENST00000360540 PI4KAP2A4QPH2 592 aa16.9■□□□□ 0.3
PCMTD1-201ENST00000360540 PI4KAP1Q8N8J0 262 aa16.9■□□□□ 0.3
PCMTD1-201ENST00000360540 EIF4A2Q14240 407 aaKnown RBP16.9■□□□□ 0.3
PCMTD1-201ENST00000360540 RAD21O60216 631 aa16.9■□□□□ 0.3
PCMTD1-201ENST00000360540 VAMP4O75379 141 aa16.9■□□□□ 0.3
PCMTD1-201ENST00000360540 BMP2KLQ5H9B9 411 aa16.9■□□□□ 0.3
PCMTD1-201ENST00000360540 CCAR2Q8N163 923 aaKnown RBP16.9■□□□□ 0.3
PCMTD1-201ENST00000360540 CHMP4CQ96CF2 233 aa16.9■□□□□ 0.3
PCMTD1-201ENST00000360540 SAMD9Q5K651 1589 aa16.9■□□□□ 0.3
PCMTD1-201ENST00000360540 CASTP20810 708 aaKnown RBP16.9■□□□□ 0.3
PCMTD1-201ENST00000360540 MCM2P49736 904 aa16.9■□□□□ 0.3
PCMTD1-201ENST00000360540 MBD3O95983 291 aa16.89■□□□□ 0.29
PCMTD1-201ENST00000360540 DDX11Q96FC9 970 aa16.89■□□□□ 0.29
PCMTD1-201ENST00000360540 UHRF1BP1Q6BDS2 1440 aa16.89■□□□□ 0.29
PCMTD1-201ENST00000360540 ABCA5Q8WWZ7 1642 aa16.89■□□□□ 0.29
PCMTD1-201ENST00000360540 NUP160Q12769 1436 aa16.89■□□□□ 0.29
PCMTD1-201ENST00000360540 PSMA5P28066 241 aa16.89■□□□□ 0.29
PCMTD1-201ENST00000360540 RRP12Q5JTH9 1297 aaKnown RBP16.89■□□□□ 0.29
PCMTD1-201ENST00000360540 LARP1BQ659C4 914 aaKnown RBP16.89■□□□□ 0.29
PCMTD1-201ENST00000360540 PRPF40BQ6NWY9 871 aaKnown RBP16.89■□□□□ 0.29
PCMTD1-201ENST00000360540 CCDC73Q6ZRK6 1079 aa16.89■□□□□ 0.29
PCMTD1-201ENST00000360540 KAT6BQ8WYB5 2073 aa16.89■□□□□ 0.29
PCMTD1-201ENST00000360540 CLSTN1O94985 981 aa16.88■□□□□ 0.29
PCMTD1-201ENST00000360540 NUCB1Q02818 461 aa16.88■□□□□ 0.29
PCMTD1-201ENST00000360540 PIP4K2AP48426 406 aaPredicted RBP16.88■□□□□ 0.29
PCMTD1-201ENST00000360540 TRIM29Q14134 588 aa16.88■□□□□ 0.29
PCMTD1-201ENST00000360540 LRRFIP1Q32MZ4 808 aaKnown RBP16.88■□□□□ 0.29
PCMTD1-201ENST00000360540 CCDC83Q8IWF9 413 aa16.88■□□□□ 0.29
PCMTD1-201ENST00000360540 TTC21BQ7Z4L5 1316 aa16.88■□□□□ 0.29
PCMTD1-201ENST00000360540 SDSP20132 328 aa16.87■□□□□ 0.29
PCMTD1-201ENST00000360540 HDAC1Q13547 482 aaPredicted RBP16.87■□□□□ 0.29
PCMTD1-201ENST00000360540 CWC22Q9HCG8 908 aaKnown RBP16.87■□□□□ 0.29
PCMTD1-201ENST00000360540 RBM10P98175 930 aaKnown RBP16.87■□□□□ 0.29
PCMTD1-201ENST00000360540 MRPL50Q8N5N7 158 aaKnown RBP16.87■□□□□ 0.29
PCMTD1-201ENST00000360540 BLOC1S2Q6QNY1 142 aa16.87■□□□□ 0.29
PCMTD1-201ENST00000360540 PPP1R42Q7Z4L9 355 aa16.87■□□□□ 0.29
PCMTD1-201ENST00000360540 KIF1BPQ96EK5 621 aa16.87■□□□□ 0.29
PCMTD1-201ENST00000360540 ARHGEF12Q9NZN5 1544 aa16.86■□□□□ 0.29
PCMTD1-201ENST00000360540 ABCC10Q5T3U5 1492 aa16.86■□□□□ 0.29
PCMTD1-201ENST00000360540 CHRNA2Q15822 529 aa16.86■□□□□ 0.29
PCMTD1-201ENST00000360540 ERC1Q8IUD2 1116 aa16.86■□□□□ 0.29
PCMTD1-201ENST00000360540 DNAAF4Q8WXU2 420 aa16.86■□□□□ 0.29
PCMTD1-201ENST00000360540 TSPY26PQ9H489 355 aa16.86■□□□□ 0.29
PCMTD1-201ENST00000360540 CIZ1Q9ULV3 898 aaPredicted RBP16.86■□□□□ 0.29
PCMTD1-201ENST00000360540 NSD2O96028 1365 aa16.86■□□□□ 0.29
PCMTD1-201ENST00000360540 RNF123Q5XPI4 1314 aa16.86■□□□□ 0.29
PCMTD1-201ENST00000360540 G3V3G9 751 aa16.86■□□□□ 0.29
PCMTD1-201ENST00000360540 DCAF8Q5TAQ9 597 aa16.86■□□□□ 0.29
PCMTD1-201ENST00000360540 TRIM5Q9C035 493 aa16.86■□□□□ 0.29
PCMTD1-201ENST00000360540 PDRG1Q9NUG6 133 aa16.86■□□□□ 0.29
PCMTD1-201ENST00000360540 ESPNB1AK53 854 aa16.85■□□□□ 0.29
PCMTD1-201ENST00000360540 MYD88Q99836 296 aa16.85■□□□□ 0.29
PCMTD1-201ENST00000360540 ZBTB40Q9NUA8 1239 aa16.85■□□□□ 0.29
PCMTD1-201ENST00000360540 WDR7Q9Y4E6 1490 aa16.85■□□□□ 0.29
PCMTD1-201ENST00000360540 ATP5J2-PTCD1G3V325 749 aa16.85■□□□□ 0.29
PCMTD1-201ENST00000360540 DTNBO60941 627 aa16.85■□□□□ 0.29
PCMTD1-201ENST00000360540 PANK2Q9BZ23 570 aa16.85■□□□□ 0.29
PCMTD1-201ENST00000360540 WDR33Q9C0J8 1336 aaKnown RBP16.85■□□□□ 0.29
PCMTD1-201ENST00000360540 MTHFSDQ2M296 383 aaKnown RBP16.84■□□□□ 0.29
PCMTD1-201ENST00000360540 OTUD7AQ8TE49 926 aaPredicted RBP16.84■□□□□ 0.29
PCMTD1-201ENST00000360540 CCDC34Q96HJ3 373 aa16.84■□□□□ 0.29
PCMTD1-201ENST00000360540 TCEANC2Q96MN5 208 aa16.84■□□□□ 0.29
PCMTD1-201ENST00000360540 CNNM1Q9NRU3 951 aa16.84■□□□□ 0.29
PCMTD1-201ENST00000360540 PIK3C2GO75747 1445 aa16.84■□□□□ 0.29
PCMTD1-201ENST00000360540 SHANK2Q9UPX8 1470 aa16.84■□□□□ 0.29
PCMTD1-201ENST00000360540 TPD52L1Q16890 204 aaPredicted RBP16.84■□□□□ 0.29
PCMTD1-201ENST00000360540 TRIM35Q9UPQ4 493 aa16.84■□□□□ 0.29
PCMTD1-201ENST00000360540 ADGRL2O95490 1459 aa16.84■□□□□ 0.29
PCMTD1-201ENST00000360540 PPIP5K1Q6PFW1 1433 aa16.83■□□□□ 0.29
PCMTD1-201ENST00000360540 LRRC59Q96AG4 307 aaKnown RBP16.83■□□□□ 0.29
PCMTD1-201ENST00000360540 IL16Q14005 1332 aa16.83■□□□□ 0.29
PCMTD1-201ENST00000360540 SLC39A6Q13433 755 aa16.83■□□□□ 0.28
PCMTD1-201ENST00000360540 TTC22Q5TAA0 569 aa16.83■□□□□ 0.28
PCMTD1-201ENST00000360540 RBM27Q9P2N5 1060 aaKnown RBP16.83■□□□□ 0.28
PCMTD1-201ENST00000360540 VPS53Q5VIR6 699 aa16.82■□□□□ 0.28
PCMTD1-201ENST00000360540 MARCH6O60337 910 aa16.82■□□□□ 0.28
PCMTD1-201ENST00000360540 CAMK4Q16566 473 aa16.82■□□□□ 0.28
PCMTD1-201ENST00000360540 G2E3Q7L622 706 aa16.82■□□□□ 0.28
PCMTD1-201ENST00000360540 MAP3K2Q9Y2U5 619 aa16.82■□□□□ 0.28
PCMTD1-201ENST00000360540 GLRX3O76003 335 aaKnown RBP16.81■□□□□ 0.28
PCMTD1-201ENST00000360540 PDCP20941 246 aa16.81■□□□□ 0.28
PCMTD1-201ENST00000360540 PDE4CQ08493 712 aa16.81■□□□□ 0.28
PCMTD1-201ENST00000360540 CHPF2Q9P2E5 772 aa16.81■□□□□ 0.28
PCMTD1-201ENST00000360540 DHX16O60231 1041 aaKnown RBP16.81■□□□□ 0.28
PCMTD1-201ENST00000360540 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.81■□□□□ 0.28
PCMTD1-201ENST00000360540 HOMER1Q86YM7 354 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms