RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 ANKRD45Q5TZF3 282 aa33.06■■■□□ 2.88
CUEDC1-201ENST00000360238 IGSF1Q8N6C5 1336 aa33.06■■■□□ 2.88
CUEDC1-201ENST00000360238 LRRC37A3O60309 1634 aa33.05■■■□□ 2.88
CUEDC1-201ENST00000360238 SOX12O15370 315 aa33.05■■■□□ 2.88
CUEDC1-201ENST00000360238 ANTXR1Q9H6X2 564 aa33.05■■■□□ 2.88
CUEDC1-201ENST00000360238 PTPRCP08575 1304 aa33.04■■■□□ 2.88
CUEDC1-201ENST00000360238 GSE1Q14687 1217 aa33.03■■■□□ 2.88
CUEDC1-201ENST00000360238 PLPPR3Q6T4P5 718 aa33.02■■■□□ 2.88
CUEDC1-201ENST00000360238 AMPHP49418 695 aa33■■■□□ 2.87
CUEDC1-201ENST00000360238 KRT24Q2M2I5 525 aa33■■■□□ 2.87
CUEDC1-201ENST00000360238 SLKQ9H2G2 1235 aaPredicted RBP33■■■□□ 2.87
CUEDC1-201ENST00000360238 MTHFSDQ2M296 383 aaKnown RBP32.99■■■□□ 2.87
CUEDC1-201ENST00000360238 RBM25P49756 843 aaKnown RBP32.99■■■□□ 2.87
CUEDC1-201ENST00000360238 GAS2L2Q8NHY3 880 aa32.99■■■□□ 2.87
CUEDC1-201ENST00000360238 RTF1Q92541 710 aaKnown RBP32.99■■■□□ 2.87
CUEDC1-201ENST00000360238 ATP10DQ9P241 1426 aa32.99■■■□□ 2.87
CUEDC1-201ENST00000360238 KCNA6P17658 529 aa32.98■■■□□ 2.87
CUEDC1-201ENST00000360238 CHD2O14647 1828 aaKnown RBP32.98■■■□□ 2.87
CUEDC1-201ENST00000360238 EYA1Q99502 592 aa32.97■■■□□ 2.87
CUEDC1-201ENST00000360238 ZNF142P52746 1687 aaPredicted RBP32.95■■■□□ 2.87
CUEDC1-201ENST00000360238 NWD1Q149M9 1564 aa32.95■■■□□ 2.86
CUEDC1-201ENST00000360238 MSH6P52701 1360 aa32.94■■■□□ 2.86
CUEDC1-201ENST00000360238 HTATSF1O43719 755 aaKnown RBP32.94■■■□□ 2.86
CUEDC1-201ENST00000360238 NLRP6P59044 892 aa32.94■■■□□ 2.86
CUEDC1-201ENST00000360238 DCTPP1Q9H773 170 aa32.94■■■□□ 2.86
CUEDC1-201ENST00000360238 FOXO3O43524 673 aa32.93■■■□□ 2.86
CUEDC1-201ENST00000360238 ANKRD44Q8N8A2 993 aa32.93■■■□□ 2.86
CUEDC1-201ENST00000360238 TSPYL4Q9UJ04 414 aa32.92■■■□□ 2.86
CUEDC1-201ENST00000360238 RPAP2Q8IXW5 612 aaPredicted RBP32.92■■■□□ 2.86
CUEDC1-201ENST00000360238 FAM208AQ9UK61 1670 aaKnown RBP32.91■■■□□ 2.86
CUEDC1-201ENST00000360238 HOXC9P31274 260 aa32.9■■■□□ 2.86
CUEDC1-201ENST00000360238 RTL1A6NKG5 1358 aa32.9■■■□□ 2.86
CUEDC1-201ENST00000360238 CACNA1FO60840 1977 aa32.89■■■□□ 2.86
CUEDC1-201ENST00000360238 LTN1O94822 1766 aa32.89■■■□□ 2.86
CUEDC1-201ENST00000360238 HSCBQ8IWL3 235 aa32.87■■■□□ 2.85
CUEDC1-201ENST00000360238 SLC4A2P04920 1241 aa32.87■■■□□ 2.85
CUEDC1-201ENST00000360238 CEP85Q6P2H3 762 aa32.86■■■□□ 2.85
CUEDC1-201ENST00000360238 SNX21Q969T3 373 aa32.85■■■□□ 2.85
CUEDC1-201ENST00000360238 N4BP2Q86UW6 1770 aaPredicted RBP32.85■■■□□ 2.85
CUEDC1-201ENST00000360238 TBC1D9Q6ZT07 1266 aa32.85■■■□□ 2.85
CUEDC1-201ENST00000360238 MIS18AQ9NYP9 233 aa32.85■■■□□ 2.85
CUEDC1-201ENST00000360238 NCOA3Q9Y6Q9 1424 aa32.84■■■□□ 2.85
CUEDC1-201ENST00000360238 EIF5BO60841 1220 aaKnown RBP32.84■■■□□ 2.85
CUEDC1-201ENST00000360238 CDC45O75419 566 aa32.83■■■□□ 2.85
CUEDC1-201ENST00000360238 PLEKHM2Q8IWE5 1019 aa32.83■■■□□ 2.85
CUEDC1-201ENST00000360238 ABTB2Q8N961 1025 aa32.83■■■□□ 2.85
CUEDC1-201ENST00000360238 GNAT3A8MTJ3 354 aa32.82■■■□□ 2.84
CUEDC1-201ENST00000360238 SOS1Q07889 1333 aaPredicted RBP32.81■■■□□ 2.84
CUEDC1-201ENST00000360238 MAP3K5Q99683 1374 aa32.81■■■□□ 2.84
CUEDC1-201ENST00000360238 CCT4P50991 539 aaKnown RBP32.8■■■□□ 2.84
CUEDC1-201ENST00000360238 MEIS3Q99687 375 aa32.8■■■□□ 2.84
CUEDC1-201ENST00000360238 CHMP5Q9NZZ3 219 aa32.8■■■□□ 2.84
CUEDC1-201ENST00000360238 BABAM1Q9NWV8 329 aa32.79■■■□□ 2.84
CUEDC1-201ENST00000360238 PHF8Q9UPP1 1060 aa32.79■■■□□ 2.84
CUEDC1-201ENST00000360238 NFAT5O94916 1531 aa32.78■■■□□ 2.84
CUEDC1-201ENST00000360238 GSPT1P15170 499 aaKnown RBP32.78■■■□□ 2.84
CUEDC1-201ENST00000360238 PHRF1Q9P1Y6 1649 aaKnown RBP32.78■■■□□ 2.84
CUEDC1-201ENST00000360238 NUTM2GQ5VZR2 741 aa32.77■■■□□ 2.84
CUEDC1-201ENST00000360238 TTC22Q5TAA0 569 aa32.77■■■□□ 2.84
CUEDC1-201ENST00000360238 ANKLE2Q86XL3 938 aa32.77■■■□□ 2.84
CUEDC1-201ENST00000360238 STK31Q9BXU1 1019 aa32.77■■■□□ 2.84
CUEDC1-201ENST00000360238 G2E3Q7L622 706 aa32.76■■■□□ 2.83
CUEDC1-201ENST00000360238 ADGRL3Q9HAR2 1447 aa32.75■■■□□ 2.83
CUEDC1-201ENST00000360238 HMMRO75330 724 aa32.75■■■□□ 2.83
CUEDC1-201ENST00000360238 KIF2CQ99661 725 aa32.74■■■□□ 2.83
CUEDC1-201ENST00000360238 SPRYD3Q8NCJ5 442 aa32.73■■■□□ 2.83
CUEDC1-201ENST00000360238 CCDC30Q5VVM6 783 aa32.73■■■□□ 2.83
CUEDC1-201ENST00000360238 PXDNLA1KZ92 1463 aa32.71■■■□□ 2.83
CUEDC1-201ENST00000360238 SLC4A10Q6U841 1118 aa32.69■■■□□ 2.82
CUEDC1-201ENST00000360238 MED1Q15648 1581 aaPredicted RBP32.69■■■□□ 2.82
CUEDC1-201ENST00000360238 F6X3S4 739 aa32.69■■■□□ 2.82
CUEDC1-201ENST00000360238 DDIT3P35638 169 aa32.69■■■□□ 2.82
CUEDC1-201ENST00000360238 IL17REQ8NFR9 667 aa32.69■■■□□ 2.82
CUEDC1-201ENST00000360238 IP6K1Q92551 441 aa32.68■■■□□ 2.82
CUEDC1-201ENST00000360238 ADAMTSL3P82987 1691 aa32.68■■■□□ 2.82
CUEDC1-201ENST00000360238 SETD1BQ9UPS6 1966 aaKnown RBP32.68■■■□□ 2.82
CUEDC1-201ENST00000360238 FLIIQ13045 1269 aa32.68■■■□□ 2.82
CUEDC1-201ENST00000360238 TAF7Q15545 349 aaPredicted RBP32.68■■■□□ 2.82
CUEDC1-201ENST00000360238 C14orf37Q86TY3 774 aa32.67■■■□□ 2.82
CUEDC1-201ENST00000360238 LTV1Q96GA3 475 aaPredicted RBP32.67■■■□□ 2.82
CUEDC1-201ENST00000360238 C16orf71Q8IYS4 520 aaPredicted RBP32.66■■■□□ 2.82
CUEDC1-201ENST00000360238 TRHP20396 242 aaPredicted RBP32.66■■■□□ 2.82
CUEDC1-201ENST00000360238 GNAI2P04899 355 aa32.65■■■□□ 2.82
CUEDC1-201ENST00000360238 MCM4P33991 863 aa32.65■■■□□ 2.82
CUEDC1-201ENST00000360238 LMO7Q8WWI1 1683 aa32.65■■■□□ 2.82
CUEDC1-201ENST00000360238 KDM3BQ7LBC6 1761 aa32.64■■■□□ 2.82
CUEDC1-201ENST00000360238 CEMIPQ8WUJ3 1361 aa32.64■■■□□ 2.82
CUEDC1-201ENST00000360238 CIZ1Q9ULV3 898 aaPredicted RBP32.64■■■□□ 2.82
CUEDC1-201ENST00000360238 HSP90AB1P08238 724 aaKnown RBP32.63■■■□□ 2.81
CUEDC1-201ENST00000360238 OTUD7AQ8TE49 926 aaPredicted RBP32.63■■■□□ 2.81
CUEDC1-201ENST00000360238 GNAI3P08754 354 aa32.62■■■□□ 2.81
CUEDC1-201ENST00000360238 FKBP5Q13451 457 aaPredicted RBP32.62■■■□□ 2.81
CUEDC1-201ENST00000360238 KCNH5Q8NCM2 988 aa32.62■■■□□ 2.81
CUEDC1-201ENST00000360238 RGPD2P0DJD1 1756 aa32.61■■■□□ 2.81
CUEDC1-201ENST00000360238 SMARCA5O60264 1052 aaPredicted RBP32.61■■■□□ 2.81
CUEDC1-201ENST00000360238 TUBGCP6Q96RT7 1819 aa32.61■■■□□ 2.81
CUEDC1-201ENST00000360238 CASC1Q6TDU7 716 aa32.6■■■□□ 2.81
CUEDC1-201ENST00000360238 OSBPL3Q9H4L5 887 aa32.6■■■□□ 2.81
CUEDC1-201ENST00000360238 K7ELQ4 463 aaPredicted RBP32.59■■■□□ 2.81
CUEDC1-201ENST00000360238 SDSP20132 328 aa32.59■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms