RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 AEBP1Q8IUX7 1158 aa11.61□□□□□ -0.55
GTF3C2-202ENST00000359541 NLRP6P59044 892 aa11.6□□□□□ -0.55
GTF3C2-202ENST00000359541 CASC1Q6TDU7 716 aa11.6□□□□□ -0.55
GTF3C2-202ENST00000359541 TSPYL4Q9UJ04 414 aa11.6□□□□□ -0.55
GTF3C2-202ENST00000359541 DIP2AQ14689 1571 aa11.6□□□□□ -0.55
GTF3C2-202ENST00000359541 UBE2Q2Q8WVN8 375 aa11.6□□□□□ -0.55
GTF3C2-202ENST00000359541 SLIT1O75093 1534 aa11.6□□□□□ -0.55
GTF3C2-202ENST00000359541 CHL1O00533 1208 aa11.6□□□□□ -0.55
GTF3C2-202ENST00000359541 C1orf115Q9H7X2 142 aa11.6□□□□□ -0.55
GTF3C2-202ENST00000359541 RPAP2Q8IXW5 612 aaPredicted RBP11.59□□□□□ -0.55
GTF3C2-202ENST00000359541 CHMP4AQ9BY43 222 aa11.59□□□□□ -0.55
GTF3C2-202ENST00000359541 MAP3K19Q56UN5 1328 aa11.59□□□□□ -0.55
GTF3C2-202ENST00000359541 MCM10Q7L590 875 aa11.59□□□□□ -0.55
GTF3C2-202ENST00000359541 NRKQ7Z2Y5 1582 aa11.59□□□□□ -0.55
GTF3C2-202ENST00000359541 ANKARQ7Z5J8 1434 aa11.59□□□□□ -0.55
GTF3C2-202ENST00000359541 HSP90AA1P07900 732 aaKnown RBP11.59□□□□□ -0.55
GTF3C2-202ENST00000359541 HTATSF1O43719 755 aaKnown RBP11.58□□□□□ -0.56
GTF3C2-202ENST00000359541 ARHGAP23Q9P227 1491 aa11.58□□□□□ -0.56
GTF3C2-202ENST00000359541 INTS3Q68E01 1043 aaKnown RBP11.58□□□□□ -0.56
GTF3C2-202ENST00000359541 TBC1D2Q9BYX2 928 aa11.58□□□□□ -0.56
GTF3C2-202ENST00000359541 FRAT2O75474 233 aaPredicted RBP11.57□□□□□ -0.56
GTF3C2-202ENST00000359541 CDC45O75419 566 aa11.57□□□□□ -0.56
GTF3C2-202ENST00000359541 CHMP5Q9NZZ3 219 aa11.57□□□□□ -0.56
GTF3C2-202ENST00000359541 PTPRUQ92729 1446 aa11.57□□□□□ -0.56
GTF3C2-202ENST00000359541 CCT4P50991 539 aaKnown RBP11.57□□□□□ -0.56
GTF3C2-202ENST00000359541 HSP90AB1P08238 724 aaKnown RBP11.56□□□□□ -0.56
GTF3C2-202ENST00000359541 LMOD2Q6P5Q4 547 aa11.56□□□□□ -0.56
GTF3C2-202ENST00000359541 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.56□□□□□ -0.56
GTF3C2-202ENST00000359541 TOPAZ1Q8N9V7 1692 aa11.56□□□□□ -0.56
GTF3C2-202ENST00000359541 ABTB2Q8N961 1025 aa11.56□□□□□ -0.56
GTF3C2-202ENST00000359541 SLC4A2P04920 1241 aa11.56□□□□□ -0.56
GTF3C2-202ENST00000359541 ANKLE2Q86XL3 938 aa11.55□□□□□ -0.56
GTF3C2-202ENST00000359541 IL27Q8NEV9 243 aa11.55□□□□□ -0.56
GTF3C2-202ENST00000359541 SOS1Q07889 1333 aaPredicted RBP11.55□□□□□ -0.56
GTF3C2-202ENST00000359541 CCDC30Q5VVM6 783 aa11.55□□□□□ -0.56
GTF3C2-202ENST00000359541 GNAT3A8MTJ3 354 aa11.54□□□□□ -0.56
GTF3C2-202ENST00000359541 ANKRD44Q8N8A2 993 aa11.54□□□□□ -0.56
GTF3C2-202ENST00000359541 MTHFSDQ2M296 383 aaKnown RBP11.54□□□□□ -0.56
GTF3C2-202ENST00000359541 SLC4A10Q6U841 1118 aa11.54□□□□□ -0.56
GTF3C2-202ENST00000359541 RBM25P49756 843 aaKnown RBP11.54□□□□□ -0.56
GTF3C2-202ENST00000359541 DCTPP1Q9H773 170 aa11.54□□□□□ -0.56
GTF3C2-202ENST00000359541 IGSF1Q8N6C5 1336 aa11.54□□□□□ -0.56
GTF3C2-202ENST00000359541 SSH2Q76I76 1423 aa11.54□□□□□ -0.56
GTF3C2-202ENST00000359541 KCNA6P17658 529 aa11.53□□□□□ -0.56
GTF3C2-202ENST00000359541 EYA1Q99502 592 aa11.53□□□□□ -0.56
GTF3C2-202ENST00000359541 KDRP35968 1356 aa11.53□□□□□ -0.56
GTF3C2-202ENST00000359541 BABAM1Q9NWV8 329 aa11.52□□□□□ -0.56
GTF3C2-202ENST00000359541 PHF8Q9UPP1 1060 aa11.52□□□□□ -0.56
GTF3C2-202ENST00000359541 FER1L4A9Z1Z3 1794 aa11.52□□□□□ -0.56
GTF3C2-202ENST00000359541 GNAI3P08754 354 aa11.52□□□□□ -0.57
GTF3C2-202ENST00000359541 SPRYD3Q8NCJ5 442 aa11.52□□□□□ -0.57
GTF3C2-202ENST00000359541 PTMSP20962 102 aa11.52□□□□□ -0.57
GTF3C2-202ENST00000359541 SNX21Q969T3 373 aa11.52□□□□□ -0.57
GTF3C2-202ENST00000359541 LTV1Q96GA3 475 aaPredicted RBP11.52□□□□□ -0.57
GTF3C2-202ENST00000359541 HOXC9P31274 260 aa11.52□□□□□ -0.57
GTF3C2-202ENST00000359541 DLG5Q8TDM6 1919 aa11.51□□□□□ -0.57
GTF3C2-202ENST00000359541 L1TD1Q5T7N2 865 aaKnown RBP11.51□□□□□ -0.57
GTF3C2-202ENST00000359541 RTL1A6NKG5 1358 aa11.51□□□□□ -0.57
GTF3C2-202ENST00000359541 NALCNQ8IZF0 1738 aa11.51□□□□□ -0.57
GTF3C2-202ENST00000359541 DDX11L8A8MPP1 907 aa11.51□□□□□ -0.57
GTF3C2-202ENST00000359541 GNAI2P04899 355 aa11.51□□□□□ -0.57
GTF3C2-202ENST00000359541 FKBP5Q13451 457 aaPredicted RBP11.51□□□□□ -0.57
GTF3C2-202ENST00000359541 KCNH5Q8NCM2 988 aa11.51□□□□□ -0.57
GTF3C2-202ENST00000359541 PSME1Q06323 249 aa11.51□□□□□ -0.57
GTF3C2-202ENST00000359541 KRT24Q2M2I5 525 aa11.51□□□□□ -0.57
GTF3C2-202ENST00000359541 NUTM2GQ5VZR2 741 aa11.51□□□□□ -0.57
GTF3C2-202ENST00000359541 TBC1D9Q6ZT07 1266 aa11.51□□□□□ -0.57
GTF3C2-202ENST00000359541 MSH6P52701 1360 aa11.5□□□□□ -0.57
GTF3C2-202ENST00000359541 CRB1P82279 1406 aa11.5□□□□□ -0.57
GTF3C2-202ENST00000359541 CEP85Q6P2H3 762 aa11.5□□□□□ -0.57
GTF3C2-202ENST00000359541 CIZ1Q9ULV3 898 aaPredicted RBP11.5□□□□□ -0.57
GTF3C2-202ENST00000359541 SIRT2Q8IXJ6 389 aa11.5□□□□□ -0.57
GTF3C2-202ENST00000359541 GBP4Q96PP9 640 aa11.5□□□□□ -0.57
GTF3C2-202ENST00000359541 MAP3K5Q99683 1374 aa11.5□□□□□ -0.57
GTF3C2-202ENST00000359541 TAF7Q15545 349 aaPredicted RBP11.5□□□□□ -0.57
GTF3C2-202ENST00000359541 MIS18AQ9NYP9 233 aa11.49□□□□□ -0.57
GTF3C2-202ENST00000359541 FOXO3O43524 673 aa11.49□□□□□ -0.57
GTF3C2-202ENST00000359541 REC8O95072 547 aa11.49□□□□□ -0.57
GTF3C2-202ENST00000359541 TTC22Q5TAA0 569 aa11.49□□□□□ -0.57
GTF3C2-202ENST00000359541 ANTXR1Q9H6X2 564 aa11.49□□□□□ -0.57
GTF3C2-202ENST00000359541 GOLGA6L22H0YM25 854 aa11.49□□□□□ -0.57
GTF3C2-202ENST00000359541 APBB1O00213 710 aa11.49□□□□□ -0.57
GTF3C2-202ENST00000359541 MEIS3Q99687 375 aa11.48□□□□□ -0.57
GTF3C2-202ENST00000359541 PLCB2Q00722 1185 aa11.48□□□□□ -0.57
GTF3C2-202ENST00000359541 PLEKHM2Q8IWE5 1019 aa11.48□□□□□ -0.57
GTF3C2-202ENST00000359541 RABEP1Q15276 862 aa11.48□□□□□ -0.57
GTF3C2-202ENST00000359541 FLIIQ13045 1269 aa11.47□□□□□ -0.57
GTF3C2-202ENST00000359541 CEP170BQ9Y4F5 1589 aaPredicted RBP11.47□□□□□ -0.57
GTF3C2-202ENST00000359541 ESCO1Q5FWF5 840 aa11.47□□□□□ -0.57
GTF3C2-202ENST00000359541 PEAK1Q9H792 1746 aa11.47□□□□□ -0.57
GTF3C2-202ENST00000359541 MCM4P33991 863 aa11.47□□□□□ -0.57
GTF3C2-202ENST00000359541 K7ELQ4 463 aaPredicted RBP11.46□□□□□ -0.57
GTF3C2-202ENST00000359541 TEFQ10587 303 aa11.46□□□□□ -0.57
GTF3C2-202ENST00000359541 RGPD1P0DJD0 1748 aa11.46□□□□□ -0.57
GTF3C2-202ENST00000359541 XRN1Q8IZH2 1706 aaKnown RBP11.46□□□□□ -0.57
GTF3C2-202ENST00000359541 HDGFL1Q5TGJ6 251 aa11.46□□□□□ -0.57
GTF3C2-202ENST00000359541 IP6K1Q92551 441 aa11.46□□□□□ -0.57
GTF3C2-202ENST00000359541 ST18O60284 1047 aa11.46□□□□□ -0.58
GTF3C2-202ENST00000359541 MCCP23508 829 aa11.46□□□□□ -0.58
GTF3C2-202ENST00000359541 HDAC5Q9UQL6 1122 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms