RNA–Protein interactions for RNA: ENST00000357325.9

HDGF-201, Transcript of heparin binding growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGF, Length 2,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-201ENST00000357325 DIP2AQ14689 1571 aa31.21■■■□□ 2.59
HDGF-201ENST00000357325 CEP170BQ9Y4F5 1589 aaPredicted RBP31.21■■■□□ 2.59
HDGF-201ENST00000357325 SLIT1O75093 1534 aa31.21■■■□□ 2.59
HDGF-201ENST00000357325 MSH6P52701 1360 aa31.2■■■□□ 2.59
HDGF-201ENST00000357325 GSPT1P15170 499 aaKnown RBP31.2■■■□□ 2.59
HDGF-201ENST00000357325 G2E3Q7L622 706 aa31.2■■■□□ 2.59
HDGF-201ENST00000357325 SLC4A2P04920 1241 aa31.2■■■□□ 2.58
HDGF-201ENST00000357325 TTC21AQ8NDW8 1320 aa31.19■■■□□ 2.58
HDGF-201ENST00000357325 AMPHP49418 695 aa31.19■■■□□ 2.58
HDGF-201ENST00000357325 KIF2CQ99661 725 aa31.19■■■□□ 2.58
HDGF-201ENST00000357325 MEIS3Q99687 375 aa31.19■■■□□ 2.58
HDGF-201ENST00000357325 ATP10DQ9P241 1426 aa31.19■■■□□ 2.58
HDGF-201ENST00000357325 OTUD7AQ8TE49 926 aaPredicted RBP31.19■■■□□ 2.58
HDGF-201ENST00000357325 KCNA6P17658 529 aa31.18■■■□□ 2.58
HDGF-201ENST00000357325 DCTPP1Q9H773 170 aa31.18■■■□□ 2.58
HDGF-201ENST00000357325 ARHGEF10O15013 1369 aa31.18■■■□□ 2.58
HDGF-201ENST00000357325 KIAA0232Q92628 1395 aa31.18■■■□□ 2.58
HDGF-201ENST00000357325 SBNO1A3KN83 1393 aa31.17■■■□□ 2.58
HDGF-201ENST00000357325 FLT4P35916 1363 aa31.17■■■□□ 2.58
HDGF-201ENST00000357325 PLEKHM2Q8IWE5 1019 aa31.17■■■□□ 2.58
HDGF-201ENST00000357325 APBB1O00213 710 aa31.16■■■□□ 2.58
HDGF-201ENST00000357325 NLRP6P59044 892 aa31.16■■■□□ 2.58
HDGF-201ENST00000357325 PIK3C2AO00443 1686 aa31.16■■■□□ 2.58
HDGF-201ENST00000357325 FMN2Q9NZ56 1722 aa31.16■■■□□ 2.58
HDGF-201ENST00000357325 F6X3S4 739 aa31.16■■■□□ 2.58
HDGF-201ENST00000357325 TSPYL4Q9UJ04 414 aa31.16■■■□□ 2.58
HDGF-201ENST00000357325 CD2BP2O95400 341 aaKnown RBP31.15■■■□□ 2.58
HDGF-201ENST00000357325 CEP85Q6P2H3 762 aa31.15■■■□□ 2.58
HDGF-201ENST00000357325 HSCBQ8IWL3 235 aa31.15■■■□□ 2.58
HDGF-201ENST00000357325 KIF24Q5T7B8 1368 aa31.14■■■□□ 2.58
HDGF-201ENST00000357325 SMARCA5O60264 1052 aaPredicted RBP31.14■■■□□ 2.58
HDGF-201ENST00000357325 ANKRD44Q8N8A2 993 aa31.14■■■□□ 2.58
HDGF-201ENST00000357325 RBM33Q96EV2 1170 aaKnown RBP31.14■■■□□ 2.58
HDGF-201ENST00000357325 RBM42Q9BTD8 480 aaKnown RBP31.14■■■□□ 2.58
HDGF-201ENST00000357325 RTF1Q92541 710 aaKnown RBP31.13■■■□□ 2.57
HDGF-201ENST00000357325 RTL1A6NKG5 1358 aa31.13■■■□□ 2.57
HDGF-201ENST00000357325 IGSF1Q8N6C5 1336 aa31.12■■■□□ 2.57
HDGF-201ENST00000357325 KDRP35968 1356 aa31.12■■■□□ 2.57
HDGF-201ENST00000357325 THEMISQ8N1K5 641 aaPredicted RBP31.12■■■□□ 2.57
HDGF-201ENST00000357325 SLC4A10Q6U841 1118 aa31.1■■■□□ 2.57
HDGF-201ENST00000357325 LTV1Q96GA3 475 aaPredicted RBP31.1■■■□□ 2.57
HDGF-201ENST00000357325 NECTIN2Q92692 538 aa31.09■■■□□ 2.57
HDGF-201ENST00000357325 CHMP5Q9NZZ3 219 aa31.09■■■□□ 2.57
HDGF-201ENST00000357325 PTPRCP08575 1304 aa31.09■■■□□ 2.57
HDGF-201ENST00000357325 FER1L4A9Z1Z3 1794 aa31.08■■■□□ 2.57
HDGF-201ENST00000357325 HOXC9P31274 260 aa31.07■■■□□ 2.56
HDGF-201ENST00000357325 MCM4P33991 863 aa31.07■■■□□ 2.56
HDGF-201ENST00000357325 HAP1P54257 671 aaPredicted RBP31.06■■■□□ 2.56
HDGF-201ENST00000357325 FOXD4L1Q9NU39 408 aa31.06■■■□□ 2.56
HDGF-201ENST00000357325 RPAP2Q8IXW5 612 aaPredicted RBP31.05■■■□□ 2.56
HDGF-201ENST00000357325 SNX21Q969T3 373 aa31.05■■■□□ 2.56
HDGF-201ENST00000357325 CDC45O75419 566 aa31.05■■■□□ 2.56
HDGF-201ENST00000357325 TTC22Q5TAA0 569 aa31.05■■■□□ 2.56
HDGF-201ENST00000357325 USHBP1Q8N6Y0 703 aa31.05■■■□□ 2.56
HDGF-201ENST00000357325 XRN1Q8IZH2 1706 aaKnown RBP31.05■■■□□ 2.56
HDGF-201ENST00000357325 DDIT3P35638 169 aa31.04■■■□□ 2.56
HDGF-201ENST00000357325 ABTB2Q8N961 1025 aa31.04■■■□□ 2.56
HDGF-201ENST00000357325 NCOA3Q9Y6Q9 1424 aa31.04■■■□□ 2.56
HDGF-201ENST00000357325 MARF1Q9Y4F3 1742 aaKnown RBP31.03■■■□□ 2.56
HDGF-201ENST00000357325 C14orf37Q86TY3 774 aa31.02■■■□□ 2.56
HDGF-201ENST00000357325 GAS2L2Q8NHY3 880 aa31.02■■■□□ 2.56
HDGF-201ENST00000357325 IL17REQ8NFR9 667 aa31.01■■■□□ 2.55
HDGF-201ENST00000357325 NWD1Q149M9 1564 aa31■■■□□ 2.55
HDGF-201ENST00000357325 GZF1Q9H116 711 aaPredicted RBP31■■■□□ 2.55
HDGF-201ENST00000357325 HSP90AB1P08238 724 aaKnown RBP30.99■■■□□ 2.55
HDGF-201ENST00000357325 ARXQ96QS3 562 aa30.98■■■□□ 2.55
HDGF-201ENST00000357325 GNAT3A8MTJ3 354 aa30.98■■■□□ 2.55
HDGF-201ENST00000357325 SDSP20132 328 aa30.97■■■□□ 2.55
HDGF-201ENST00000357325 ANKARQ7Z5J8 1434 aa30.94■■■□□ 2.54
HDGF-201ENST00000357325 FLIIQ13045 1269 aa30.93■■■□□ 2.54
HDGF-201ENST00000357325 FKBP5Q13451 457 aaPredicted RBP30.92■■■□□ 2.54
HDGF-201ENST00000357325 TSHZ3Q63HK5 1081 aa30.92■■■□□ 2.54
HDGF-201ENST00000357325 EXOC6BQ9Y2D4 811 aa30.92■■■□□ 2.54
HDGF-201ENST00000357325 STK31Q9BXU1 1019 aa30.92■■■□□ 2.54
HDGF-201ENST00000357325 CCT4P50991 539 aaKnown RBP30.91■■■□□ 2.54
HDGF-201ENST00000357325 TNPO1Q92973 898 aaKnown RBP30.91■■■□□ 2.54
HDGF-201ENST00000357325 PLEKHG5O94827 1062 aa30.91■■■□□ 2.54
HDGF-201ENST00000357325 LRRC37A3O60309 1634 aa30.9■■■□□ 2.54
HDGF-201ENST00000357325 K7ELQ4 463 aaPredicted RBP30.9■■■□□ 2.54
HDGF-201ENST00000357325 TRAK2O60296 914 aa30.9■■■□□ 2.54
HDGF-201ENST00000357325 USP26Q9BXU7 913 aa30.9■■■□□ 2.54
HDGF-201ENST00000357325 PHF8Q9UPP1 1060 aa30.89■■■□□ 2.54
HDGF-201ENST00000357325 MAP3K5Q99683 1374 aa30.89■■■□□ 2.54
HDGF-201ENST00000357325 ZBTB7CA1YPR0 619 aa30.88■■■□□ 2.53
HDGF-201ENST00000357325 SETD1BQ9UPS6 1966 aaKnown RBP30.88■■■□□ 2.53
HDGF-201ENST00000357325 PNMA6EA0A0J9YXQ4 647 aa30.88■■■□□ 2.53
HDGF-201ENST00000357325 HTATSF1O43719 755 aaKnown RBP30.88■■■□□ 2.53
HDGF-201ENST00000357325 HSP90AA1P07900 732 aaKnown RBP30.86■■■□□ 2.53
HDGF-201ENST00000357325 CCDC30Q5VVM6 783 aa30.86■■■□□ 2.53
HDGF-201ENST00000357325 GNAI2P04899 355 aa30.86■■■□□ 2.53
HDGF-201ENST00000357325 FAM208AQ9UK61 1670 aaKnown RBP30.85■■■□□ 2.53
HDGF-201ENST00000357325 TAF7Q15545 349 aaPredicted RBP30.85■■■□□ 2.53
HDGF-201ENST00000357325 NBPF6Q5VWK0 638 aa30.85■■■□□ 2.53
HDGF-201ENST00000357325 NBPF4Q96M43 638 aa30.85■■■□□ 2.53
HDGF-201ENST00000357325 PHAXQ9H814 394 aaKnown RBP30.85■■■□□ 2.53
HDGF-201ENST00000357325 HMMRO75330 724 aa30.84■■■□□ 2.53
HDGF-201ENST00000357325 TRHP20396 242 aaPredicted RBP30.84■■■□□ 2.53
HDGF-201ENST00000357325 RAB3GAP1Q15042 981 aa30.83■■■□□ 2.53
HDGF-201ENST00000357325 LGR6Q9HBX8 967 aa30.83■■■□□ 2.53
HDGF-201ENST00000357325 PDE1AP54750 535 aa30.83■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms