RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 C8orf37Q96NL8 207 aa14.79□□□□□ -0.04
COLCA1-201ENST00000355430 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.79□□□□□ -0.04
COLCA1-201ENST00000355430 BLMP54132 1417 aaPredicted RBP14.79□□□□□ -0.04
COLCA1-201ENST00000355430 LRRCC1Q9C099 1032 aa14.79□□□□□ -0.04
COLCA1-201ENST00000355430 DCTN1Q14203 1278 aa14.78□□□□□ -0.04
COLCA1-201ENST00000355430 TCEAL9Q9UHQ7 104 aa14.78□□□□□ -0.04
COLCA1-201ENST00000355430 ADGBQ8N7X0 1667 aa14.78□□□□□ -0.04
COLCA1-201ENST00000355430 MAP4K4O95819 1239 aaPredicted RBP14.78□□□□□ -0.04
COLCA1-201ENST00000355430 LRRC59Q96AG4 307 aaKnown RBP14.78□□□□□ -0.04
COLCA1-201ENST00000355430 CCT4P50991 539 aaKnown RBP14.78□□□□□ -0.04
COLCA1-201ENST00000355430 MPNDQ8N594 471 aa14.78□□□□□ -0.04
COLCA1-201ENST00000355430 NEUROD6Q96NK8 337 aa14.78□□□□□ -0.04
COLCA1-201ENST00000355430 HDGFL1Q5TGJ6 251 aa14.77□□□□□ -0.04
COLCA1-201ENST00000355430 GNL3LQ9NVN8 582 aaKnown RBP14.77□□□□□ -0.04
COLCA1-201ENST00000355430 TRAPPC8Q9Y2L5 1435 aa14.77□□□□□ -0.04
COLCA1-201ENST00000355430 RNF20Q5VTR2 975 aa14.77□□□□□ -0.04
COLCA1-201ENST00000355430 BCL11BQ9C0K0 894 aaPredicted RBP14.77□□□□□ -0.04
COLCA1-201ENST00000355430 BTBD11A6QL63 1104 aa14.77□□□□□ -0.05
COLCA1-201ENST00000355430 FOSBP53539 338 aa14.77□□□□□ -0.05
COLCA1-201ENST00000355430 RASSF8Q8NHQ8 419 aa14.77□□□□□ -0.05
COLCA1-201ENST00000355430 C14orf93Q9H972 538 aaKnown RBP14.77□□□□□ -0.05
COLCA1-201ENST00000355430 IFT57Q9NWB7 429 aa14.77□□□□□ -0.05
COLCA1-201ENST00000355430 DNAJC5Q9H3Z4 198 aa14.77□□□□□ -0.05
COLCA1-201ENST00000355430 FIBPO43427 364 aa14.76□□□□□ -0.05
COLCA1-201ENST00000355430 TBC1D9Q6ZT07 1266 aa14.76□□□□□ -0.05
COLCA1-201ENST00000355430 KDM5CP41229 1560 aa14.76□□□□□ -0.05
COLCA1-201ENST00000355430 NCBP3Q53F19 620 aaKnown RBP14.76□□□□□ -0.05
COLCA1-201ENST00000355430 RPAP2Q8IXW5 612 aaPredicted RBP14.76□□□□□ -0.05
COLCA1-201ENST00000355430 HDAC1Q13547 482 aaPredicted RBP14.76□□□□□ -0.05
COLCA1-201ENST00000355430 CARD14Q9BXL6 1004 aa14.76□□□□□ -0.05
COLCA1-201ENST00000355430 POLR3AO14802 1390 aaPredicted RBP14.75□□□□□ -0.05
COLCA1-201ENST00000355430 NSD2O96028 1365 aa14.75□□□□□ -0.05
COLCA1-201ENST00000355430 SASS6Q6UVJ0 657 aa14.75□□□□□ -0.05
COLCA1-201ENST00000355430 CNNM1Q9NRU3 951 aa14.75□□□□□ -0.05
COLCA1-201ENST00000355430 BMP2KLQ5H9B9 411 aa14.75□□□□□ -0.05
COLCA1-201ENST00000355430 DHX16O60231 1041 aaKnown RBP14.74□□□□□ -0.05
COLCA1-201ENST00000355430 NUCB1Q02818 461 aa14.74□□□□□ -0.05
COLCA1-201ENST00000355430 SYCE3A1L190 88 aa14.74□□□□□ -0.05
COLCA1-201ENST00000355430 XRCC6P12956 609 aaKnown RBP eCLIP14.74□□□□□ -0.05
COLCA1-201ENST00000355430 TRDNQ13061 729 aa14.74□□□□□ -0.05
COLCA1-201ENST00000355430 GNAT3A8MTJ3 354 aa14.74□□□□□ -0.05
COLCA1-201ENST00000355430 LETM1O95202 739 aaPredicted RBP14.74□□□□□ -0.05
COLCA1-201ENST00000355430 ZSCAN30Q86W11 494 aa14.74□□□□□ -0.05
COLCA1-201ENST00000355430 MIS18AQ9NYP9 233 aa14.74□□□□□ -0.05
COLCA1-201ENST00000355430 EMILIN1Q9Y6C2 1016 aa14.74□□□□□ -0.05
COLCA1-201ENST00000355430 CPLX2Q6PUV4 134 aaKnown RBP14.74□□□□□ -0.05
COLCA1-201ENST00000355430 MCM10Q7L590 875 aa14.74□□□□□ -0.05
COLCA1-201ENST00000355430 PANK2Q9BZ23 570 aa14.74□□□□□ -0.05
COLCA1-201ENST00000355430 NEO1Q92859 1461 aa14.73□□□□□ -0.05
COLCA1-201ENST00000355430 BICDL1Q6ZP65 573 aa14.73□□□□□ -0.05
COLCA1-201ENST00000355430 CCAR1Q8IX12 1150 aaKnown RBP14.73□□□□□ -0.05
COLCA1-201ENST00000355430 TBC1D2BQ9UPU7 963 aa14.73□□□□□ -0.05
COLCA1-201ENST00000355430 EXOC6BQ9Y2D4 811 aa14.73□□□□□ -0.05
COLCA1-201ENST00000355430 AK7Q96M32 723 aa14.73□□□□□ -0.05
COLCA1-201ENST00000355430 MAP7D2Q96T17 732 aa14.73□□□□□ -0.05
COLCA1-201ENST00000355430 WDR33Q9C0J8 1336 aaKnown RBP14.72□□□□□ -0.05
COLCA1-201ENST00000355430 NME9Q86XW9 330 aa14.72□□□□□ -0.05
COLCA1-201ENST00000355430 CLASRPQ8N2M8 674 aaKnown RBP14.72□□□□□ -0.05
COLCA1-201ENST00000355430 UQCRHLA0A096LP55 91 aa14.72□□□□□ -0.05
COLCA1-201ENST00000355430 UQCRHP07919 91 aa14.72□□□□□ -0.05
COLCA1-201ENST00000355430 MPRIPQ6WCQ1 1025 aa14.72□□□□□ -0.05
COLCA1-201ENST00000355430 MPHOSPH8Q99549 860 aa14.72□□□□□ -0.05
COLCA1-201ENST00000355430 ERICH2A1L162 156 aa14.71□□□□□ -0.05
COLCA1-201ENST00000355430 RRP9O43818 475 aaKnown RBP14.71□□□□□ -0.05
COLCA1-201ENST00000355430 MYL6BP14649 208 aa14.71□□□□□ -0.05
COLCA1-201ENST00000355430 IL1RAPL2Q9NP60 686 aa14.71□□□□□ -0.05
COLCA1-201ENST00000355430 IL16Q14005 1332 aa14.71□□□□□ -0.05
COLCA1-201ENST00000355430 NBPF14Q5TI25 921 aa14.71□□□□□ -0.05
COLCA1-201ENST00000355430 SPC24Q8NBT2 197 aa14.71□□□□□ -0.06
COLCA1-201ENST00000355430 FSD1Q9BTV5 496 aa14.71□□□□□ -0.06
COLCA1-201ENST00000355430 ACEP12821 1306 aa14.7□□□□□ -0.06
COLCA1-201ENST00000355430 FBLN1P23142 703 aa14.7□□□□□ -0.06
COLCA1-201ENST00000355430 PSMA5P28066 241 aa14.7□□□□□ -0.06
COLCA1-201ENST00000355430 ZNF771Q7L3S4 317 aaPredicted RBP14.7□□□□□ -0.06
COLCA1-201ENST00000355430 MBIPQ9NS73 344 aa14.7□□□□□ -0.06
COLCA1-201ENST00000355430 ANKRD36BQ8N2N9 1353 aa14.7□□□□□ -0.06
COLCA1-201ENST00000355430 MTERF4Q7Z6M4 381 aaKnown RBP14.69□□□□□ -0.06
COLCA1-201ENST00000355430 PTCD1O75127 700 aaKnown RBP14.69□□□□□ -0.06
COLCA1-201ENST00000355430 TTC21AQ8NDW8 1320 aa14.69□□□□□ -0.06
COLCA1-201ENST00000355430 BAG4O95429 457 aaKnown RBP14.69□□□□□ -0.06
COLCA1-201ENST00000355430 INSRP06213 1382 aa14.69□□□□□ -0.06
COLCA1-201ENST00000355430 TBX22Q9Y458 520 aa14.69□□□□□ -0.06
COLCA1-201ENST00000355430 WASHC4Q2M389 1173 aa14.68□□□□□ -0.06
COLCA1-201ENST00000355430 NUTM1Q86Y26 1132 aa14.68□□□□□ -0.06
COLCA1-201ENST00000355430 SRCIN1Q9C0H9 1055 aa14.68□□□□□ -0.06
COLCA1-201ENST00000355430 ZFYVE16Q7Z3T8 1539 aa14.68□□□□□ -0.06
COLCA1-201ENST00000355430 FYB1O15117 783 aa14.68□□□□□ -0.06
COLCA1-201ENST00000355430 CHRNA2Q15822 529 aa14.68□□□□□ -0.06
COLCA1-201ENST00000355430 TEX13AQ9BXU3 409 aaPredicted RBP14.68□□□□□ -0.06
COLCA1-201ENST00000355430 TRIM5Q9C035 493 aa14.67□□□□□ -0.06
COLCA1-201ENST00000355430 TTC21BQ7Z4L5 1316 aa14.67□□□□□ -0.06
COLCA1-201ENST00000355430 FAM83GA6ND36 823 aa14.67□□□□□ -0.06
COLCA1-201ENST00000355430 TPM3P06753 285 aa14.67□□□□□ -0.06
COLCA1-201ENST00000355430 CCDC57Q2TAC2 916 aa14.67□□□□□ -0.06
COLCA1-201ENST00000355430 SAMD1Q6SPF0 538 aaPredicted RBP14.67□□□□□ -0.06
COLCA1-201ENST00000355430 CCDC73Q6ZRK6 1079 aa14.67□□□□□ -0.06
COLCA1-201ENST00000355430 MAST1Q9Y2H9 1570 aa14.67□□□□□ -0.06
COLCA1-201ENST00000355430 F6X3S4 739 aa14.67□□□□□ -0.06
COLCA1-201ENST00000355430 ERC1Q8IUD2 1116 aa14.67□□□□□ -0.06
COLCA1-201ENST00000355430 IFNL2Q8IZJ0 200 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms