RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 SLAIN2Q9P270 581 aa11.75□□□□□ -0.53
GABPA-201ENST00000354828 C6orf229H3BNL8 230 aa11.74□□□□□ -0.53
GABPA-201ENST00000354828 TTLL12Q14166 644 aaPredicted RBP11.74□□□□□ -0.53
GABPA-201ENST00000354828 LRP2BPQ9P2M1 347 aa11.74□□□□□ -0.53
GABPA-201ENST00000354828 ABCF2Q9UG63 623 aa11.74□□□□□ -0.53
GABPA-201ENST00000354828 DNMT1P26358 1616 aaKnown RBP11.74□□□□□ -0.53
GABPA-201ENST00000354828 A0A087WZG4 1122 aa11.74□□□□□ -0.53
GABPA-201ENST00000354828 HSP90AB2PQ58FF8 381 aa11.74□□□□□ -0.53
GABPA-201ENST00000354828 NACAP1Q9BZK3 213 aa11.74□□□□□ -0.53
GABPA-201ENST00000354828 PES1O00541 588 aaKnown RBP11.74□□□□□ -0.53
GABPA-201ENST00000354828 SAFBQ15424 915 aaKnown RBP eCLIP11.74□□□□□ -0.53
GABPA-201ENST00000354828 WDHD1O75717 1129 aaPredicted RBP11.73□□□□□ -0.53
GABPA-201ENST00000354828 GCP02774 474 aa11.73□□□□□ -0.53
GABPA-201ENST00000354828 AAMPQ13685 434 aa11.73□□□□□ -0.53
GABPA-201ENST00000354828 ADGRL2O95490 1459 aa11.73□□□□□ -0.53
GABPA-201ENST00000354828 CAVIN4Q5BKX8 364 aa11.73□□□□□ -0.53
GABPA-201ENST00000354828 ORAI2Q96SN7 254 aa11.73□□□□□ -0.53
GABPA-201ENST00000354828 FOSBP53539 338 aa11.73□□□□□ -0.53
GABPA-201ENST00000354828 WWC3Q9ULE0 1092 aa11.73□□□□□ -0.53
GABPA-201ENST00000354828 KDM4AO75164 1064 aa11.72□□□□□ -0.53
GABPA-201ENST00000354828 CT47B1P0C2W7 299 aaPredicted RBP11.72□□□□□ -0.53
GABPA-201ENST00000354828 ST5P78524 1137 aa11.72□□□□□ -0.53
GABPA-201ENST00000354828 TPD52L1Q16890 204 aaPredicted RBP11.72□□□□□ -0.53
GABPA-201ENST00000354828 NBPF6Q5VWK0 638 aa11.72□□□□□ -0.53
GABPA-201ENST00000354828 AACSQ86V21 672 aa11.72□□□□□ -0.53
GABPA-201ENST00000354828 NBPF5PQ86XG9 351 aaPredicted RBP11.72□□□□□ -0.53
GABPA-201ENST00000354828 CNKSR2Q8WXI2 1034 aa11.72□□□□□ -0.53
GABPA-201ENST00000354828 NBPF4Q96M43 638 aa11.72□□□□□ -0.53
GABPA-201ENST00000354828 BCAR3O75815 825 aa11.72□□□□□ -0.53
GABPA-201ENST00000354828 PTMSP20962 102 aa11.72□□□□□ -0.53
GABPA-201ENST00000354828 IFIT1P09914 478 aaKnown RBP11.72□□□□□ -0.53
GABPA-201ENST00000354828 ANO8Q9HCE9 1232 aaPredicted RBP11.72□□□□□ -0.53
GABPA-201ENST00000354828 IFIT5Q13325 482 aaKnown RBP11.72□□□□□ -0.53
GABPA-201ENST00000354828 ZSCAN25Q6NSZ9 544 aa11.72□□□□□ -0.53
GABPA-201ENST00000354828 DDX46Q7L014 1031 aaKnown RBP11.72□□□□□ -0.53
GABPA-201ENST00000354828 DBF4Q9UBU7 674 aaPredicted RBP11.72□□□□□ -0.53
GABPA-201ENST00000354828 ATP6V1DQ9Y5K8 247 aa11.72□□□□□ -0.53
GABPA-201ENST00000354828 HIP1O00291 1037 aa11.71□□□□□ -0.53
GABPA-201ENST00000354828 ATF7IPQ6VMQ6 1270 aa11.71□□□□□ -0.53
GABPA-201ENST00000354828 LRRCC1Q9C099 1032 aa11.71□□□□□ -0.53
GABPA-201ENST00000354828 HYPKQ9NX55 129 aa11.71□□□□□ -0.53
GABPA-201ENST00000354828 IDH1O75874 414 aaKnown RBP11.71□□□□□ -0.54
GABPA-201ENST00000354828 IFT57Q9NWB7 429 aa11.71□□□□□ -0.54
GABPA-201ENST00000354828 SNRPA1P09661 255 aaKnown RBP11.71□□□□□ -0.54
GABPA-201ENST00000354828 PPP1R42Q7Z4L9 355 aa11.71□□□□□ -0.54
GABPA-201ENST00000354828 GZF1Q9H116 711 aaPredicted RBP11.71□□□□□ -0.54
GABPA-201ENST00000354828 USP21Q9UK80 565 aa11.71□□□□□ -0.54
GABPA-201ENST00000354828 CFAP74Q9C0B2 1584 aa11.7□□□□□ -0.54
GABPA-201ENST00000354828 XBP1P17861 261 aa11.7□□□□□ -0.54
GABPA-201ENST00000354828 BRMS1Q9HCU9 246 aa11.7□□□□□ -0.54
GABPA-201ENST00000354828 MBD5Q9P267 1494 aa11.7□□□□□ -0.54
GABPA-201ENST00000354828 ZCCHC11Q5TAX3 1644 aaKnown RBP11.7□□□□□ -0.54
GABPA-201ENST00000354828 PDE4CQ08493 712 aa11.7□□□□□ -0.54
GABPA-201ENST00000354828 CCDC47Q96A33 483 aaKnown RBP11.7□□□□□ -0.54
GABPA-201ENST00000354828 KAT6BQ8WYB5 2073 aa11.7□□□□□ -0.54
GABPA-201ENST00000354828 SETDB2Q96T68 719 aa11.69□□□□□ -0.54
GABPA-201ENST00000354828 ZRANB1Q9UGI0 708 aa11.69□□□□□ -0.54
GABPA-201ENST00000354828 MYO5CQ9NQX4 1742 aa11.69□□□□□ -0.54
GABPA-201ENST00000354828 NSD2O96028 1365 aa11.69□□□□□ -0.54
GABPA-201ENST00000354828 MAGI2Q86UL8 1455 aa11.69□□□□□ -0.54
GABPA-201ENST00000354828 CDC45O75419 566 aa11.69□□□□□ -0.54
GABPA-201ENST00000354828 PSMA5P28066 241 aa11.69□□□□□ -0.54
GABPA-201ENST00000354828 DDX17Q92841 729 aaKnown RBP11.69□□□□□ -0.54
GABPA-201ENST00000354828 ANKRD18BA2A2Z9 1011 aa11.69□□□□□ -0.54
GABPA-201ENST00000354828 FAM98CQ17RN3 349 aaKnown RBP11.69□□□□□ -0.54
GABPA-201ENST00000354828 STK32BQ9NY57 414 aa11.69□□□□□ -0.54
GABPA-201ENST00000354828 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.68□□□□□ -0.54
GABPA-201ENST00000354828 AKAP2Q9Y2D5 859 aa11.68□□□□□ -0.54
GABPA-201ENST00000354828 C11orf95C9JLR9 678 aaPredicted RBP11.68□□□□□ -0.54
GABPA-201ENST00000354828 TDO2P48775 406 aa11.68□□□□□ -0.54
GABPA-201ENST00000354828 CEP89Q96ST8 783 aa11.68□□□□□ -0.54
GABPA-201ENST00000354828 IL1RAPL2Q9NP60 686 aa11.68□□□□□ -0.54
GABPA-201ENST00000354828 ATP5J2-PTCD1G3V325 749 aa11.68□□□□□ -0.54
GABPA-201ENST00000354828 SLC39A6Q13433 755 aa11.68□□□□□ -0.54
GABPA-201ENST00000354828 RTCBQ9Y3I0 505 aaKnown RBP11.68□□□□□ -0.54
GABPA-201ENST00000354828 VPS37CA5D8V6 355 aaPredicted RBP11.68□□□□□ -0.54
GABPA-201ENST00000354828 CRACR2BQ8N4Y2 399 aaPredicted RBP11.68□□□□□ -0.54
GABPA-201ENST00000354828 DNAAF4Q8WXU2 420 aa11.68□□□□□ -0.54
GABPA-201ENST00000354828 PRM3Q9NNZ6 103 aa11.68□□□□□ -0.54
GABPA-201ENST00000354828 MAP4K4O95819 1239 aaPredicted RBP11.67□□□□□ -0.54
GABPA-201ENST00000354828 GCC1Q96CN9 775 aa11.67□□□□□ -0.54
GABPA-201ENST00000354828 CDC5LQ99459 802 aaKnown RBP11.67□□□□□ -0.54
GABPA-201ENST00000354828 DZIP1Q86YF9 867 aaKnown RBP11.67□□□□□ -0.54
GABPA-201ENST00000354828 SMC3Q9UQE7 1217 aa11.67□□□□□ -0.54
GABPA-201ENST00000354828 ANKRD36BQ8N2N9 1353 aa11.67□□□□□ -0.54
GABPA-201ENST00000354828 PDE3AQ14432 1141 aa11.67□□□□□ -0.54
GABPA-201ENST00000354828 PARP3Q9Y6F1 533 aa11.67□□□□□ -0.54
GABPA-201ENST00000354828 MLH3Q9UHC1 1453 aa11.67□□□□□ -0.54
GABPA-201ENST00000354828 PRAG1Q86YV5 1406 aa11.67□□□□□ -0.54
GABPA-201ENST00000354828 R3HCC1Q9Y3T6 440 aaKnown RBP11.67□□□□□ -0.54
GABPA-201ENST00000354828 MPHOSPH10O00566 681 aaKnown RBP11.66□□□□□ -0.54
GABPA-201ENST00000354828 DISP3Q9P2K9 1392 aa11.66□□□□□ -0.54
GABPA-201ENST00000354828 FAM83GA6ND36 823 aa11.66□□□□□ -0.54
GABPA-201ENST00000354828 CDCA7Q9BWT1 371 aaPredicted RBP11.66□□□□□ -0.54
GABPA-201ENST00000354828 PZPP20742 1482 aa11.66□□□□□ -0.54
GABPA-201ENST00000354828 TRPM2O94759 1503 aa11.66□□□□□ -0.54
GABPA-201ENST00000354828 USP5P45974 858 aa11.66□□□□□ -0.54
GABPA-201ENST00000354828 CLEC11AQ9Y240 323 aa11.66□□□□□ -0.54
GABPA-201ENST00000354828 TSPOAP1O95153 1857 aa11.66□□□□□ -0.54
GABPA-201ENST00000354828 F6X3S4 739 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms