RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 FSD1Q9BTV5 496 aa15.07■□□□□ 0
PCDHB11-201ENST00000354757 HOXC9P31274 260 aa15.07■□□□□ 0
PCDHB11-201ENST00000354757 MYD88Q99836 296 aa15.07■□□□□ 0
PCDHB11-201ENST00000354757 BACH2Q9BYV9 841 aa15.07■□□□□ 0
PCDHB11-201ENST00000354757 GCC1Q96CN9 775 aa15.06■□□□□ 0
PCDHB11-201ENST00000354757 GBP4Q96PP9 640 aa15.06■□□□□ 0
PCDHB11-201ENST00000354757 PUS7Q96PZ0 661 aaKnown RBP15.06■□□□□ 0
PCDHB11-201ENST00000354757 MAGI2Q86UL8 1455 aa15.06■□□□□ 0
PCDHB11-201ENST00000354757 CDC45O75419 566 aa15.06■□□□□ 0
PCDHB11-201ENST00000354757 AAMPQ13685 434 aa15.06■□□□□ 0
PCDHB11-201ENST00000354757 LRRCC1Q9C099 1032 aa15.06■□□□□ 0
PCDHB11-201ENST00000354757 RSPH6AQ9H0K4 717 aa15.06■□□□□ 0
PCDHB11-201ENST00000354757 LRRFIP2Q9Y608 721 aaKnown RBP15.06■□□□□ 0
PCDHB11-201ENST00000354757 IFNL2Q8IZJ0 200 aa15.06■□□□□ 0
PCDHB11-201ENST00000354757 PCDHB15Q9Y5E8 787 aa15.06■□□□□ 0
PCDHB11-201ENST00000354757 GPTP24298 496 aa15.06■□□□□ 0
PCDHB11-201ENST00000354757 TSHZ3Q63HK5 1081 aa15.06■□□□□ 0
PCDHB11-201ENST00000354757 LRRIQ1Q96JM4 1722 aa15.06■□□□□ 0
PCDHB11-201ENST00000354757 FLT4P35916 1363 aa15.05■□□□□ 0
PCDHB11-201ENST00000354757 EXOC5O00471 708 aa15.05■□□□□ -0
PCDHB11-201ENST00000354757 ERC2O15083 957 aa15.05■□□□□ -0
PCDHB11-201ENST00000354757 RUFY2Q8WXA3 655 aa15.05■□□□□ -0
PCDHB11-201ENST00000354757 ACSBG1Q96GR2 724 aa15.05■□□□□ -0
PCDHB11-201ENST00000354757 ALDH1L2Q3SY69 923 aa15.05■□□□□ -0
PCDHB11-201ENST00000354757 CLASP1Q7Z460 1538 aa15.04■□□□□ -0
PCDHB11-201ENST00000354757 ZKSCAN1P17029 563 aaPredicted RBP15.04■□□□□ -0
PCDHB11-201ENST00000354757 FOSBP53539 338 aa15.04■□□□□ -0
PCDHB11-201ENST00000354757 NFATC2IPQ8NCF5 419 aa15.04■□□□□ -0
PCDHB11-201ENST00000354757 MEIS3Q99687 375 aa15.04■□□□□ -0
PCDHB11-201ENST00000354757 CNNM1Q9NRU3 951 aa15.04■□□□□ -0
PCDHB11-201ENST00000354757 CHPF2Q9P2E5 772 aa15.04■□□□□ -0
PCDHB11-201ENST00000354757 IL13P35225 146 aa15.03■□□□□ -0
PCDHB11-201ENST00000354757 HECW2Q9P2P5 1572 aa15.03■□□□□ -0
PCDHB11-201ENST00000354757 L1TD1Q5T7N2 865 aaKnown RBP15.03■□□□□ -0
PCDHB11-201ENST00000354757 C8orf37Q96NL8 207 aa15.03■□□□□ -0
PCDHB11-201ENST00000354757 ROBO2Q9HCK4 1378 aa15.03■□□□□ -0
PCDHB11-201ENST00000354757 AACSQ86V21 672 aa15.03■□□□□ -0
PCDHB11-201ENST00000354757 DNAAF4Q8WXU2 420 aa15.03■□□□□ -0
PCDHB11-201ENST00000354757 DBF4Q9UBU7 674 aaPredicted RBP15.03■□□□□ -0
PCDHB11-201ENST00000354757 CDC42BPBQ9Y5S2 1711 aa15.03■□□□□ -0
PCDHB11-201ENST00000354757 PIK3C2GO75747 1445 aa15.03■□□□□ -0
PCDHB11-201ENST00000354757 KDM4AO75164 1064 aa15.02□□□□□ -0.01
PCDHB11-201ENST00000354757 CCDC27Q2M243 656 aa15.02□□□□□ -0.01
PCDHB11-201ENST00000354757 STK11IPQ8N1F8 1099 aa15.02□□□□□ -0.01
PCDHB11-201ENST00000354757 MAP3K2Q9Y2U5 619 aa15.01□□□□□ -0.01
PCDHB11-201ENST00000354757 PRR36Q9H6K5 1346 aa15.01□□□□□ -0.01
PCDHB11-201ENST00000354757 RPAP2Q8IXW5 612 aaPredicted RBP15.01□□□□□ -0.01
PCDHB11-201ENST00000354757 RAD21O60216 631 aa15.01□□□□□ -0.01
PCDHB11-201ENST00000354757 VAMP4O75379 141 aa15.01□□□□□ -0.01
PCDHB11-201ENST00000354757 NEK4P51957 841 aa15.01□□□□□ -0.01
PCDHB11-201ENST00000354757 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15□□□□□ -0.01
PCDHB11-201ENST00000354757 CCDC57Q2TAC2 916 aa15□□□□□ -0.01
PCDHB11-201ENST00000354757 NBPF6Q5VWK0 638 aa15□□□□□ -0.01
PCDHB11-201ENST00000354757 NBPF4Q96M43 638 aa15□□□□□ -0.01
PCDHB11-201ENST00000354757 FMNL2Q96PY5 1086 aa15□□□□□ -0.01
PCDHB11-201ENST00000354757 LGR6Q9HBX8 967 aa15□□□□□ -0.01
PCDHB11-201ENST00000354757 ERVK-7P63135 1459 aa15□□□□□ -0.01
PCDHB11-201ENST00000354757 PPP1R1BQ9UD71 204 aaPredicted RBP15□□□□□ -0.01
PCDHB11-201ENST00000354757 TRIM35Q9UPQ4 493 aa15□□□□□ -0.01
PCDHB11-201ENST00000354757 TRPM2O94759 1503 aa15□□□□□ -0.01
PCDHB11-201ENST00000354757 A0A087WZG4 1122 aa15□□□□□ -0.01
PCDHB11-201ENST00000354757 STARD3NLO95772 234 aa15□□□□□ -0.01
PCDHB11-201ENST00000354757 ZCRB1Q8TBF4 217 aaKnown RBP15□□□□□ -0.01
PCDHB11-201ENST00000354757 FKBP4Q02790 459 aaKnown RBP eCLIP14.99□□□□□ -0.01
PCDHB11-201ENST00000354757 UBE3BQ7Z3V4 1068 aa14.99□□□□□ -0.01
PCDHB11-201ENST00000354757 CNTROBQ8N137 903 aa14.99□□□□□ -0.01
PCDHB11-201ENST00000354757 IP6K1Q92551 441 aa14.99□□□□□ -0.01
PCDHB11-201ENST00000354757 ABCC3O15438 1527 aa14.99□□□□□ -0.01
PCDHB11-201ENST00000354757 PLEKHG3A1L390 1219 aa14.99□□□□□ -0.01
PCDHB11-201ENST00000354757 MCTP1Q6DN14 999 aa14.99□□□□□ -0.01
PCDHB11-201ENST00000354757 CCDC8Q9H0W5 538 aaPredicted RBP14.99□□□□□ -0.01
PCDHB11-201ENST00000354757 BTG4Q9NY30 223 aa14.99□□□□□ -0.01
PCDHB11-201ENST00000354757 EDC4Q6P2E9 1401 aaKnown RBP14.98□□□□□ -0.01
PCDHB11-201ENST00000354757 KDM5DQ9BY66 1539 aa14.98□□□□□ -0.01
PCDHB11-201ENST00000354757 SLAIN2Q9P270 581 aa14.98□□□□□ -0.01
PCDHB11-201ENST00000354757 MTMR7Q9Y216 660 aa14.98□□□□□ -0.01
PCDHB11-201ENST00000354757 LARP1Q6PKG0 1096 aaKnown RBP14.98□□□□□ -0.01
PCDHB11-201ENST00000354757 CWC27Q6UX04 472 aaKnown RBP14.98□□□□□ -0.01
PCDHB11-201ENST00000354757 COPS6Q7L5N1 327 aa14.98□□□□□ -0.01
PCDHB11-201ENST00000354757 EFCAB6Q5THR3 1501 aa14.98□□□□□ -0.01
PCDHB11-201ENST00000354757 TOM1O60784 492 aa14.98□□□□□ -0.01
PCDHB11-201ENST00000354757 G2E3Q7L622 706 aa14.98□□□□□ -0.01
PCDHB11-201ENST00000354757 HSP90AA2PQ14568 343 aaPredicted RBP14.97□□□□□ -0.01
PCDHB11-201ENST00000354757 MPHOSPH8Q99549 860 aa14.97□□□□□ -0.01
PCDHB11-201ENST00000354757 ARID3AQ99856 593 aa14.97□□□□□ -0.01
PCDHB11-201ENST00000354757 PHAXQ9H814 394 aaKnown RBP14.97□□□□□ -0.01
PCDHB11-201ENST00000354757 VPS37CA5D8V6 355 aaPredicted RBP14.97□□□□□ -0.01
PCDHB11-201ENST00000354757 FAM184AQ8NB25 1140 aa14.97□□□□□ -0.01
PCDHB11-201ENST00000354757 XAGE3Q8WTP9 111 aa14.96□□□□□ -0.01
PCDHB11-201ENST00000354757 BOLA2Q9H3K6 86 aa14.96□□□□□ -0.01
PCDHB11-201ENST00000354757 IL16Q14005 1332 aa14.96□□□□□ -0.01
PCDHB11-201ENST00000354757 CEP126Q9P2H0 1117 aa14.96□□□□□ -0.01
PCDHB11-201ENST00000354757 LMTK3Q96Q04 1460 aa14.96□□□□□ -0.02
PCDHB11-201ENST00000354757 CFAP74Q9C0B2 1584 aa14.96□□□□□ -0.02
PCDHB11-201ENST00000354757 GOLGA6L3A6NEY3 463 aa14.95□□□□□ -0.02
PCDHB11-201ENST00000354757 AKAP4Q5JQC9 854 aa14.95□□□□□ -0.02
PCDHB11-201ENST00000354757 DDX49Q9Y6V7 483 aaKnown RBP14.95□□□□□ -0.02
PCDHB11-201ENST00000354757 H3BQV1 296 aa14.95□□□□□ -0.02
PCDHB11-201ENST00000354757 IFFO2Q5TF58 517 aa14.95□□□□□ -0.02
PCDHB11-201ENST00000354757 MRPL50Q8N5N7 158 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms