RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 G2E3Q7L622 706 aa24.28■■□□□ 1.48
COL13A1-201ENST00000354547 TSPYL4Q9UJ04 414 aa24.28■■□□□ 1.48
COL13A1-201ENST00000354547 XRCC6P12956 609 aaKnown RBP eCLIP24.27■■□□□ 1.48
COL13A1-201ENST00000354547 MTHFSDQ2M296 383 aaKnown RBP24.27■■□□□ 1.48
COL13A1-201ENST00000354547 MAP3K19Q56UN5 1328 aa24.27■■□□□ 1.48
COL13A1-201ENST00000354547 CEP85Q6P2H3 762 aa24.27■■□□□ 1.48
COL13A1-201ENST00000354547 ANKRD44Q8N8A2 993 aa24.27■■□□□ 1.48
COL13A1-201ENST00000354547 AMPHP49418 695 aa24.27■■□□□ 1.47
COL13A1-201ENST00000354547 MON2Q7Z3U7 1717 aa24.26■■□□□ 1.47
COL13A1-201ENST00000354547 TECPR2O15040 1411 aa24.25■■□□□ 1.47
COL13A1-201ENST00000354547 AMOTL2Q9Y2J4 779 aa24.25■■□□□ 1.47
COL13A1-201ENST00000354547 ITSN1Q15811 1721 aa24.25■■□□□ 1.47
COL13A1-201ENST00000354547 C3P01024 1663 aa24.25■■□□□ 1.47
COL13A1-201ENST00000354547 K7ELQ4 463 aaPredicted RBP24.25■■□□□ 1.47
COL13A1-201ENST00000354547 TTC22Q5TAA0 569 aa24.25■■□□□ 1.47
COL13A1-201ENST00000354547 ADAMTS13Q76LX8 1427 aa24.24■■□□□ 1.47
COL13A1-201ENST00000354547 PLEKHG3A1L390 1219 aa24.24■■□□□ 1.47
COL13A1-201ENST00000354547 GAS2L2Q8NHY3 880 aa24.24■■□□□ 1.47
COL13A1-201ENST00000354547 DDX11L8A8MPP1 907 aa24.23■■□□□ 1.47
COL13A1-201ENST00000354547 DDIT3P35638 169 aa24.23■■□□□ 1.47
COL13A1-201ENST00000354547 LTV1Q96GA3 475 aaPredicted RBP24.23■■□□□ 1.47
COL13A1-201ENST00000354547 KNDC1Q76NI1 1749 aa24.23■■□□□ 1.47
COL13A1-201ENST00000354547 HAP1P54257 671 aaPredicted RBP24.23■■□□□ 1.47
COL13A1-201ENST00000354547 USP6P35125 1406 aa24.23■■□□□ 1.47
COL13A1-201ENST00000354547 RPAP2Q8IXW5 612 aaPredicted RBP24.22■■□□□ 1.47
COL13A1-201ENST00000354547 RGS12O14924 1447 aa24.21■■□□□ 1.47
COL13A1-201ENST00000354547 SDSP20132 328 aa24.21■■□□□ 1.47
COL13A1-201ENST00000354547 EID1Q9Y6B2 187 aa24.21■■□□□ 1.47
COL13A1-201ENST00000354547 AKAP12Q02952 1782 aa24.21■■□□□ 1.47
COL13A1-201ENST00000354547 RTL1A6NKG5 1358 aa24.2■■□□□ 1.47
COL13A1-201ENST00000354547 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.2■■□□□ 1.46
COL13A1-201ENST00000354547 OVOS2A0A0J9YW53 1432 aa24.2■■□□□ 1.46
COL13A1-201ENST00000354547 OVOS2Q6IE36 1432 aa24.2■■□□□ 1.46
COL13A1-201ENST00000354547 TSHZ3Q63HK5 1081 aa24.2■■□□□ 1.46
COL13A1-201ENST00000354547 EYA1Q99502 592 aa24.2■■□□□ 1.46
COL13A1-201ENST00000354547 NCOA3Q9Y6Q9 1424 aa24.2■■□□□ 1.46
COL13A1-201ENST00000354547 SSFA2P28290 1259 aa24.19■■□□□ 1.46
COL13A1-201ENST00000354547 ATP10DQ9P241 1426 aa24.19■■□□□ 1.46
COL13A1-201ENST00000354547 NLRP6P59044 892 aa24.19■■□□□ 1.46
COL13A1-201ENST00000354547 C14orf37Q86TY3 774 aa24.19■■□□□ 1.46
COL13A1-201ENST00000354547 GBP4Q96PP9 640 aa24.19■■□□□ 1.46
COL13A1-201ENST00000354547 RAB3GAP1Q15042 981 aa24.18■■□□□ 1.46
COL13A1-201ENST00000354547 PTPRCP08575 1304 aa24.18■■□□□ 1.46
COL13A1-201ENST00000354547 EXOC6BQ9Y2D4 811 aa24.18■■□□□ 1.46
COL13A1-201ENST00000354547 PLEKHG5O94827 1062 aa24.17■■□□□ 1.46
COL13A1-201ENST00000354547 FAM43AQ8N2R8 423 aa24.17■■□□□ 1.46
COL13A1-201ENST00000354547 PTPRUQ92729 1446 aa24.17■■□□□ 1.46
COL13A1-201ENST00000354547 FSD2A1L4K1 749 aa24.16■■□□□ 1.46
COL13A1-201ENST00000354547 KIAA0232Q92628 1395 aa24.16■■□□□ 1.46
COL13A1-201ENST00000354547 CRB1P82279 1406 aa24.16■■□□□ 1.46
COL13A1-201ENST00000354547 KIF24Q5T7B8 1368 aa24.15■■□□□ 1.46
COL13A1-201ENST00000354547 PEAK1Q9H792 1746 aa24.15■■□□□ 1.46
COL13A1-201ENST00000354547 USP26Q9BXU7 913 aa24.15■■□□□ 1.46
COL13A1-201ENST00000354547 CIZ1Q9ULV3 898 aaPredicted RBP24.15■■□□□ 1.46
COL13A1-201ENST00000354547 FKBP5Q13451 457 aaPredicted RBP24.14■■□□□ 1.46
COL13A1-201ENST00000354547 STK31Q9BXU1 1019 aa24.14■■□□□ 1.46
COL13A1-201ENST00000354547 RRAGDQ9NQL2 400 aaPredicted RBP24.14■■□□□ 1.46
COL13A1-201ENST00000354547 RIMS1Q86UR5 1692 aaKnown RBP24.14■■□□□ 1.45
COL13A1-201ENST00000354547 EIF5BO60841 1220 aaKnown RBP24.13■■□□□ 1.45
COL13A1-201ENST00000354547 CASC1Q6TDU7 716 aa24.13■■□□□ 1.45
COL13A1-201ENST00000354547 PLEKHG1Q9ULL1 1385 aa24.12■■□□□ 1.45
COL13A1-201ENST00000354547 UBR1Q8IWV7 1749 aa24.12■■□□□ 1.45
COL13A1-201ENST00000354547 HMMRO75330 724 aa24.12■■□□□ 1.45
COL13A1-201ENST00000354547 USHBP1Q8N6Y0 703 aa24.12■■□□□ 1.45
COL13A1-201ENST00000354547 ZBTB7CA1YPR0 619 aa24.12■■□□□ 1.45
COL13A1-201ENST00000354547 RABEP1Q15276 862 aa24.11■■□□□ 1.45
COL13A1-201ENST00000354547 FLT4P35916 1363 aa24.11■■□□□ 1.45
COL13A1-201ENST00000354547 RBM33Q96EV2 1170 aaKnown RBP24.11■■□□□ 1.45
COL13A1-201ENST00000354547 USP31Q70CQ4 1352 aa24.11■■□□□ 1.45
COL13A1-201ENST00000354547 NRKQ7Z2Y5 1582 aa24.11■■□□□ 1.45
COL13A1-201ENST00000354547 GRPEL1Q9HAV7 217 aa24.1■■□□□ 1.45
COL13A1-201ENST00000354547 AK9Q5TCS8 1911 aa24.1■■□□□ 1.45
COL13A1-201ENST00000354547 GAS2L3Q86XJ1 694 aa24.09■■□□□ 1.45
COL13A1-201ENST00000354547 MRE11P49959 708 aa24.08■■□□□ 1.45
COL13A1-201ENST00000354547 CCT4P50991 539 aaKnown RBP24.08■■□□□ 1.45
COL13A1-201ENST00000354547 ARHGEF10O15013 1369 aa24.08■■□□□ 1.45
COL13A1-201ENST00000354547 GNAI2P04899 355 aa24.08■■□□□ 1.45
COL13A1-201ENST00000354547 FLIIQ13045 1269 aa24.08■■□□□ 1.45
COL13A1-201ENST00000354547 TTC21AQ8NDW8 1320 aa24.08■■□□□ 1.45
COL13A1-201ENST00000354547 SBNO1A3KN83 1393 aa24.08■■□□□ 1.45
COL13A1-201ENST00000354547 PKP1Q13835 747 aa24.08■■□□□ 1.44
COL13A1-201ENST00000354547 ABTB2Q8N961 1025 aa24.08■■□□□ 1.44
COL13A1-201ENST00000354547 PDE1AP54750 535 aa24.07■■□□□ 1.44
COL13A1-201ENST00000354547 CEP170BQ9Y4F5 1589 aaPredicted RBP24.07■■□□□ 1.44
COL13A1-201ENST00000354547 PNMA6EA0A0J9YXQ4 647 aa24.06■■□□□ 1.44
COL13A1-201ENST00000354547 NCLP19338 710 aaKnown RBP24.06■■□□□ 1.44
COL13A1-201ENST00000354547 GNAT3A8MTJ3 354 aa24.06■■□□□ 1.44
COL13A1-201ENST00000354547 ZGPATQ8N5A5 531 aaKnown RBP24.05■■□□□ 1.44
COL13A1-201ENST00000354547 FOXD4L5Q5VV16 416 aaPredicted RBP24.05■■□□□ 1.44
COL13A1-201ENST00000354547 MCTP1Q6DN14 999 aa24.05■■□□□ 1.44
COL13A1-201ENST00000354547 FOXD4L4Q8WXT5 416 aaPredicted RBP24.05■■□□□ 1.44
COL13A1-201ENST00000354547 RILPL2Q969X0 211 aa24.05■■□□□ 1.44
COL13A1-201ENST00000354547 IGSF1Q8N6C5 1336 aa24.05■■□□□ 1.44
COL13A1-201ENST00000354547 GOLGA6L22H0YM25 854 aa24.05■■□□□ 1.44
COL13A1-201ENST00000354547 DDX49Q9Y6V7 483 aaKnown RBP24.05■■□□□ 1.44
COL13A1-201ENST00000354547 TRIM6-TRIM34B2RNG4 842 aa24.04■■□□□ 1.44
COL13A1-201ENST00000354547 NOL8Q76FK4 1167 aaKnown RBP24.04■■□□□ 1.44
COL13A1-201ENST00000354547 SSH2Q76I76 1423 aa24.04■■□□□ 1.44
COL13A1-201ENST00000354547 BAG4O95429 457 aaKnown RBP24.04■■□□□ 1.44
COL13A1-201ENST00000354547 CCDC30Q5VVM6 783 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms