RNA–Protein interactions for RNA: ENST00000353278.8

SLC6A20-201, Transcript of solute carrier family 6 member 20, humanhuman

TSL 1 (best) BASIC

Gene SLC6A20, Length 5,247 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-201ENST00000353278 PDZRN3Q9UPQ7 1066 aa13.35□□□□□ -0.27
SLC6A20-201ENST00000353278 CAMSAP2Q08AD1 1489 aa13.35□□□□□ -0.27
SLC6A20-201ENST00000353278 GPS2Q13227 327 aa13.35□□□□□ -0.27
SLC6A20-201ENST00000353278 RDXP35241 583 aaKnown RBP13.34□□□□□ -0.27
SLC6A20-201ENST00000353278 PIP4K2AP48426 406 aaPredicted RBP13.34□□□□□ -0.27
SLC6A20-201ENST00000353278 RPAP2Q8IXW5 612 aaPredicted RBP13.34□□□□□ -0.27
SLC6A20-201ENST00000353278 RABEP1Q15276 862 aa13.34□□□□□ -0.27
SLC6A20-201ENST00000353278 IFNL2Q8IZJ0 200 aa13.34□□□□□ -0.27
SLC6A20-201ENST00000353278 CDKL5O76039 1030 aa13.34□□□□□ -0.27
SLC6A20-201ENST00000353278 NOL7Q9UMY1 257 aaKnown RBP13.34□□□□□ -0.27
SLC6A20-201ENST00000353278 IFIT5Q13325 482 aaKnown RBP13.34□□□□□ -0.27
SLC6A20-201ENST00000353278 TTLL12Q14166 644 aaPredicted RBP13.34□□□□□ -0.27
SLC6A20-201ENST00000353278 MCM10Q7L590 875 aa13.34□□□□□ -0.27
SLC6A20-201ENST00000353278 NPHP3Q7Z494 1330 aa13.33□□□□□ -0.28
SLC6A20-201ENST00000353278 SYCP1Q15431 976 aa13.33□□□□□ -0.28
SLC6A20-201ENST00000353278 MAGEC2Q9UBF1 373 aaPredicted RBP13.33□□□□□ -0.28
SLC6A20-201ENST00000353278 CUL7Q14999 1698 aa13.33□□□□□ -0.28
SLC6A20-201ENST00000353278 USP5P45974 858 aa13.33□□□□□ -0.28
SLC6A20-201ENST00000353278 CCDC173Q0VFZ6 552 aa13.33□□□□□ -0.28
SLC6A20-201ENST00000353278 SLF2Q8IX21 1173 aa13.33□□□□□ -0.28
SLC6A20-201ENST00000353278 DHX29Q7Z478 1369 aaKnown RBP13.33□□□□□ -0.28
SLC6A20-201ENST00000353278 ZNF76P36508 570 aa13.32□□□□□ -0.28
SLC6A20-201ENST00000353278 ZNF592Q92610 1267 aa13.32□□□□□ -0.28
SLC6A20-201ENST00000353278 MYD88Q99836 296 aa13.32□□□□□ -0.28
SLC6A20-201ENST00000353278 ARID3AQ99856 593 aa13.32□□□□□ -0.28
SLC6A20-201ENST00000353278 POLR3DP05423 398 aaPredicted RBP13.32□□□□□ -0.28
SLC6A20-201ENST00000353278 DZIP1Q86YF9 867 aaKnown RBP13.32□□□□□ -0.28
SLC6A20-201ENST00000353278 SPINK5Q9NQ38 1064 aaPredicted RBP13.32□□□□□ -0.28
SLC6A20-201ENST00000353278 MIS18AQ9NYP9 233 aa13.32□□□□□ -0.28
SLC6A20-201ENST00000353278 FAM135AQ9P2D6 1515 aa13.32□□□□□ -0.28
SLC6A20-201ENST00000353278 BCAR3O75815 825 aa13.32□□□□□ -0.28
SLC6A20-201ENST00000353278 KRT32Q14532 448 aa13.32□□□□□ -0.28
SLC6A20-201ENST00000353278 MVPQ14764 893 aaKnown RBP13.32□□□□□ -0.28
SLC6A20-201ENST00000353278 FILIP1LQ4L180 1135 aa13.32□□□□□ -0.28
SLC6A20-201ENST00000353278 ZHX3Q9H4I2 956 aa13.32□□□□□ -0.28
SLC6A20-201ENST00000353278 TTC21BQ7Z4L5 1316 aa13.31□□□□□ -0.28
SLC6A20-201ENST00000353278 BLOC1S2Q6QNY1 142 aa13.31□□□□□ -0.28
SLC6A20-201ENST00000353278 ADGRF5Q8IZF2 1346 aa13.31□□□□□ -0.28
SLC6A20-201ENST00000353278 C6orf229H3BNL8 230 aa13.31□□□□□ -0.28
SLC6A20-201ENST00000353278 IL1RAPL2Q9NP60 686 aa13.31□□□□□ -0.28
SLC6A20-201ENST00000353278 A0A087WZG4 1122 aa13.31□□□□□ -0.28
SLC6A20-201ENST00000353278 BMP2KQ9NSY1 1161 aaPredicted RBP13.31□□□□□ -0.28
SLC6A20-201ENST00000353278 ZNF219Q9P2Y4 722 aaPredicted RBP13.31□□□□□ -0.28
SLC6A20-201ENST00000353278 RFC4P35249 363 aa13.3□□□□□ -0.28
SLC6A20-201ENST00000353278 PDCL3Q9H2J4 239 aa13.3□□□□□ -0.28
SLC6A20-201ENST00000353278 HYPKQ9NX55 129 aa13.3□□□□□ -0.28
SLC6A20-201ENST00000353278 SLC5A1P13866 664 aa13.3□□□□□ -0.28
SLC6A20-201ENST00000353278 IFT57Q9NWB7 429 aa13.3□□□□□ -0.28
SLC6A20-201ENST00000353278 DBF4Q9UBU7 674 aaPredicted RBP13.3□□□□□ -0.28
SLC6A20-201ENST00000353278 EMILIN1Q9Y6C2 1016 aa13.3□□□□□ -0.28
SLC6A20-201ENST00000353278 ANKRD18BA2A2Z9 1011 aa13.3□□□□□ -0.28
SLC6A20-201ENST00000353278 KIF1BPQ96EK5 621 aa13.3□□□□□ -0.28
SLC6A20-201ENST00000353278 STIM1Q13586 685 aa13.3□□□□□ -0.28
SLC6A20-201ENST00000353278 HSP90AB2PQ58FF8 381 aa13.3□□□□□ -0.28
SLC6A20-201ENST00000353278 NAIPQ13075 1403 aa13.3□□□□□ -0.28
SLC6A20-201ENST00000353278 IMMTQ16891 758 aaKnown RBP13.29□□□□□ -0.28
SLC6A20-201ENST00000353278 MKNK2Q9HBH9 465 aa13.29□□□□□ -0.28
SLC6A20-201ENST00000353278 ABCC11Q96J66 1382 aa13.29□□□□□ -0.28
SLC6A20-201ENST00000353278 FANCIQ9NVI1 1328 aa13.29□□□□□ -0.28
SLC6A20-201ENST00000353278 CHRNA2Q15822 529 aa13.29□□□□□ -0.28
SLC6A20-201ENST00000353278 CDC5LQ99459 802 aaKnown RBP13.29□□□□□ -0.28
SLC6A20-201ENST00000353278 MAP4K4O95819 1239 aaPredicted RBP13.29□□□□□ -0.28
SLC6A20-201ENST00000353278 MAP3K12Q12852 859 aa13.29□□□□□ -0.28
SLC6A20-201ENST00000353278 DDX46Q7L014 1031 aaKnown RBP13.29□□□□□ -0.28
SLC6A20-201ENST00000353278 AEBP1Q8IUX7 1158 aa13.29□□□□□ -0.28
SLC6A20-201ENST00000353278 PDILTQ8N807 584 aa13.29□□□□□ -0.28
SLC6A20-201ENST00000353278 THUMPD2Q9BTF0 503 aaKnown RBP13.29□□□□□ -0.28
SLC6A20-201ENST00000353278 ZNF608Q9ULD9 1512 aaPredicted RBP13.28□□□□□ -0.28
SLC6A20-201ENST00000353278 ANKRD24Q8TF21 1146 aa13.28□□□□□ -0.28
SLC6A20-201ENST00000353278 WASF1Q92558 559 aa13.28□□□□□ -0.28
SLC6A20-201ENST00000353278 ABCC5O15440 1437 aa13.28□□□□□ -0.28
SLC6A20-201ENST00000353278 STK3Q13188 491 aa13.28□□□□□ -0.28
SLC6A20-201ENST00000353278 PPP1R42Q7Z4L9 355 aa13.28□□□□□ -0.28
SLC6A20-201ENST00000353278 MBD3O95983 291 aa13.27□□□□□ -0.28
SLC6A20-201ENST00000353278 DCTN1Q14203 1278 aa13.27□□□□□ -0.28
SLC6A20-201ENST00000353278 NOS1P29475 1434 aa13.27□□□□□ -0.28
SLC6A20-201ENST00000353278 CDR1P51861 262 aa13.27□□□□□ -0.28
SLC6A20-201ENST00000353278 TNIP1Q15025 636 aa13.27□□□□□ -0.28
SLC6A20-201ENST00000353278 WDR78Q5VTH9 848 aa13.27□□□□□ -0.28
SLC6A20-201ENST00000353278 RAB11FIP3O75154 756 aa13.27□□□□□ -0.29
SLC6A20-201ENST00000353278 SSBP05455 408 aaKnown RBP eCLIP13.27□□□□□ -0.29
SLC6A20-201ENST00000353278 GPTP24298 496 aa13.27□□□□□ -0.29
SLC6A20-201ENST00000353278 DNAAF4Q8WXU2 420 aa13.27□□□□□ -0.29
SLC6A20-201ENST00000353278 ZNF622Q969S3 477 aaKnown RBP eCLIP13.27□□□□□ -0.29
SLC6A20-201ENST00000353278 C8orf37Q96NL8 207 aa13.27□□□□□ -0.29
SLC6A20-201ENST00000353278 UHRF1BP1LA0JNW5 1464 aa13.27□□□□□ -0.29
SLC6A20-201ENST00000353278 ACEP12821 1306 aa13.27□□□□□ -0.29
SLC6A20-201ENST00000353278 GLRX3O76003 335 aaKnown RBP13.27□□□□□ -0.29
SLC6A20-201ENST00000353278 ZBTB3Q9H5J0 574 aa13.27□□□□□ -0.29
SLC6A20-201ENST00000353278 C14orf93Q9H972 538 aaKnown RBP13.27□□□□□ -0.29
SLC6A20-201ENST00000353278 FAM13BQ9NYF5 915 aa13.27□□□□□ -0.29
SLC6A20-201ENST00000353278 SMARCE1Q969G3 411 aa13.26□□□□□ -0.29
SLC6A20-201ENST00000353278 LDHCP07864 332 aa13.26□□□□□ -0.29
SLC6A20-201ENST00000353278 CHD1LQ86WJ1 897 aa13.26□□□□□ -0.29
SLC6A20-201ENST00000353278 SMARCC1Q92922 1105 aaPredicted RBP13.26□□□□□ -0.29
SLC6A20-201ENST00000353278 URB2Q14146 1524 aaKnown RBP13.26□□□□□ -0.29
SLC6A20-201ENST00000353278 LETM1O95202 739 aaPredicted RBP13.26□□□□□ -0.29
SLC6A20-201ENST00000353278 ST5P78524 1137 aa13.26□□□□□ -0.29
SLC6A20-201ENST00000353278 CWC27Q6UX04 472 aaKnown RBP13.26□□□□□ -0.29
SLC6A20-201ENST00000353278 SEC63Q9UGP8 760 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms