RNA–Protein interactions for RNA: ENST00000351817.4

NKX2-4-201, Transcript of NK2 homeobox 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX2-4, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-4-201ENST00000351817 USP31Q70CQ4 1352 aa27.4■■□□□ 1.98
NKX2-4-201ENST00000351817 DDIT3P35638 169 aa27.4■■□□□ 1.98
NKX2-4-201ENST00000351817 DCTPP1Q9H773 170 aa27.4■■□□□ 1.98
NKX2-4-201ENST00000351817 EIF5BO60841 1220 aaKnown RBP27.38■■□□□ 1.97
NKX2-4-201ENST00000351817 CDC45O75419 566 aa27.38■■□□□ 1.97
NKX2-4-201ENST00000351817 KIF2CQ99661 725 aa27.38■■□□□ 1.97
NKX2-4-201ENST00000351817 RGS12O14924 1447 aa27.37■■□□□ 1.97
NKX2-4-201ENST00000351817 SSH2Q76I76 1423 aa27.37■■□□□ 1.97
NKX2-4-201ENST00000351817 RGPD8O14715 1765 aaPredicted RBP27.37■■□□□ 1.97
NKX2-4-201ENST00000351817 MCM10Q7L590 875 aa27.36■■□□□ 1.97
NKX2-4-201ENST00000351817 CIZ1Q9ULV3 898 aaPredicted RBP27.36■■□□□ 1.97
NKX2-4-201ENST00000351817 HSP90AB1P08238 724 aaKnown RBP27.36■■□□□ 1.97
NKX2-4-201ENST00000351817 HSP90AB2PQ58FF8 381 aa27.36■■□□□ 1.97
NKX2-4-201ENST00000351817 ANKRD44Q8N8A2 993 aa27.36■■□□□ 1.97
NKX2-4-201ENST00000351817 PTPRCP08575 1304 aa27.36■■□□□ 1.97
NKX2-4-201ENST00000351817 KCNA6P17658 529 aa27.35■■□□□ 1.97
NKX2-4-201ENST00000351817 KRT24Q2M2I5 525 aa27.35■■□□□ 1.97
NKX2-4-201ENST00000351817 PLEKHM2Q8IWE5 1019 aa27.35■■□□□ 1.97
NKX2-4-201ENST00000351817 RPAP2Q8IXW5 612 aaPredicted RBP27.35■■□□□ 1.97
NKX2-4-201ENST00000351817 ADAMTSL3P82987 1691 aa27.34■■□□□ 1.97
NKX2-4-201ENST00000351817 DDX11L8A8MPP1 907 aa27.34■■□□□ 1.97
NKX2-4-201ENST00000351817 ATP10DQ9P241 1426 aa27.34■■□□□ 1.97
NKX2-4-201ENST00000351817 ARHGEF10O15013 1369 aa27.33■■□□□ 1.97
NKX2-4-201ENST00000351817 FMN2Q9NZ56 1722 aa27.32■■□□□ 1.96
NKX2-4-201ENST00000351817 ZNF142P52746 1687 aaPredicted RBP27.32■■□□□ 1.96
NKX2-4-201ENST00000351817 CRB1P82279 1406 aa27.32■■□□□ 1.96
NKX2-4-201ENST00000351817 TTC21AQ8NDW8 1320 aa27.32■■□□□ 1.96
NKX2-4-201ENST00000351817 TRAK2O60296 914 aa27.32■■□□□ 1.96
NKX2-4-201ENST00000351817 GSPT1P15170 499 aaKnown RBP27.32■■□□□ 1.96
NKX2-4-201ENST00000351817 TTC22Q5TAA0 569 aa27.29■■□□□ 1.96
NKX2-4-201ENST00000351817 CEP85Q6P2H3 762 aa27.29■■□□□ 1.96
NKX2-4-201ENST00000351817 MSH6P52701 1360 aa27.29■■□□□ 1.96
NKX2-4-201ENST00000351817 GOLGA6L3A6NEY3 463 aa27.28■■□□□ 1.96
NKX2-4-201ENST00000351817 K7ELQ4 463 aaPredicted RBP27.28■■□□□ 1.96
NKX2-4-201ENST00000351817 RTL1A6NKG5 1358 aa27.28■■□□□ 1.96
NKX2-4-201ENST00000351817 FSD2A1L4K1 749 aa27.28■■□□□ 1.96
NKX2-4-201ENST00000351817 MAP3K19Q56UN5 1328 aa27.27■■□□□ 1.96
NKX2-4-201ENST00000351817 FAM43AQ8N2R8 423 aa27.26■■□□□ 1.96
NKX2-4-201ENST00000351817 SBNO1A3KN83 1393 aa27.26■■□□□ 1.96
NKX2-4-201ENST00000351817 FLT4P35916 1363 aa27.26■■□□□ 1.95
NKX2-4-201ENST00000351817 ANKLE2Q86XL3 938 aa27.25■■□□□ 1.95
NKX2-4-201ENST00000351817 CHD2O14647 1828 aaKnown RBP27.25■■□□□ 1.95
NKX2-4-201ENST00000351817 HSP90AA1P07900 732 aaKnown RBP27.25■■□□□ 1.95
NKX2-4-201ENST00000351817 RAB3GAP1Q15042 981 aa27.25■■□□□ 1.95
NKX2-4-201ENST00000351817 RTF1Q92541 710 aaKnown RBP27.25■■□□□ 1.95
NKX2-4-201ENST00000351817 TNPO1Q92973 898 aaKnown RBP27.25■■□□□ 1.95
NKX2-4-201ENST00000351817 ANKARQ7Z5J8 1434 aa27.25■■□□□ 1.95
NKX2-4-201ENST00000351817 SOX12O15370 315 aa27.24■■□□□ 1.95
NKX2-4-201ENST00000351817 CD2BP2O95400 341 aaKnown RBP27.24■■□□□ 1.95
NKX2-4-201ENST00000351817 SLC4A2P04920 1241 aa27.24■■□□□ 1.95
NKX2-4-201ENST00000351817 GZF1Q9H116 711 aaPredicted RBP27.24■■□□□ 1.95
NKX2-4-201ENST00000351817 KDRP35968 1356 aa27.24■■□□□ 1.95
NKX2-4-201ENST00000351817 NGDNQ8NEJ9 315 aaKnown RBP27.24■■□□□ 1.95
NKX2-4-201ENST00000351817 GBP4Q96PP9 640 aa27.24■■□□□ 1.95
NKX2-4-201ENST00000351817 MTHFSDQ2M296 383 aaKnown RBP27.23■■□□□ 1.95
NKX2-4-201ENST00000351817 C16orf71Q8IYS4 520 aaPredicted RBP27.23■■□□□ 1.95
NKX2-4-201ENST00000351817 MEIS3Q99687 375 aa27.23■■□□□ 1.95
NKX2-4-201ENST00000351817 RBM42Q9BTD8 480 aaKnown RBP27.22■■□□□ 1.95
NKX2-4-201ENST00000351817 TSPYL4Q9UJ04 414 aa27.22■■□□□ 1.95
NKX2-4-201ENST00000351817 PIK3C2AO00443 1686 aa27.21■■□□□ 1.95
NKX2-4-201ENST00000351817 SETD1BQ9UPS6 1966 aaKnown RBP27.2■■□□□ 1.95
NKX2-4-201ENST00000351817 FOXO3O43524 673 aa27.2■■□□□ 1.94
NKX2-4-201ENST00000351817 XRCC6P12956 609 aaKnown RBP eCLIP27.2■■□□□ 1.94
NKX2-4-201ENST00000351817 PTMSP20962 102 aa27.2■■□□□ 1.94
NKX2-4-201ENST00000351817 RABEP1Q15276 862 aa27.2■■□□□ 1.94
NKX2-4-201ENST00000351817 GAS2L2Q8NHY3 880 aa27.2■■□□□ 1.94
NKX2-4-201ENST00000351817 HMMRO75330 724 aa27.19■■□□□ 1.94
NKX2-4-201ENST00000351817 MIS18AQ9NYP9 233 aa27.19■■□□□ 1.94
NKX2-4-201ENST00000351817 CCT4P50991 539 aaKnown RBP27.18■■□□□ 1.94
NKX2-4-201ENST00000351817 IGSF1Q8N6C5 1336 aa27.18■■□□□ 1.94
NKX2-4-201ENST00000351817 OTUD7AQ8TE49 926 aaPredicted RBP27.18■■□□□ 1.94
NKX2-4-201ENST00000351817 AMPHP49418 695 aa27.17■■□□□ 1.94
NKX2-4-201ENST00000351817 CASC1Q6TDU7 716 aa27.17■■□□□ 1.94
NKX2-4-201ENST00000351817 EYA1Q99502 592 aa27.17■■□□□ 1.94
NKX2-4-201ENST00000351817 USP26Q9BXU7 913 aa27.17■■□□□ 1.94
NKX2-4-201ENST00000351817 HTATSF1O43719 755 aaKnown RBP27.16■■□□□ 1.94
NKX2-4-201ENST00000351817 SMARCA5O60264 1052 aaPredicted RBP27.16■■□□□ 1.94
NKX2-4-201ENST00000351817 SDSP20132 328 aa27.16■■□□□ 1.94
NKX2-4-201ENST00000351817 ISY1Q9ULR0 285 aaKnown RBP27.16■■□□□ 1.94
NKX2-4-201ENST00000351817 SKOR2Q2VWA4 1001 aaPredicted RBP27.15■■□□□ 1.94
NKX2-4-201ENST00000351817 G2E3Q7L622 706 aa27.15■■□□□ 1.94
NKX2-4-201ENST00000351817 FOXD4L1Q9NU39 408 aa27.15■■□□□ 1.94
NKX2-4-201ENST00000351817 MRE11P49959 708 aa27.14■■□□□ 1.94
NKX2-4-201ENST00000351817 ARXQ96QS3 562 aa27.13■■□□□ 1.93
NKX2-4-201ENST00000351817 MARF1Q9Y4F3 1742 aaKnown RBP27.13■■□□□ 1.93
NKX2-4-201ENST00000351817 LRRC37A3O60309 1634 aa27.13■■□□□ 1.93
NKX2-4-201ENST00000351817 APBB1O00213 710 aa27.13■■□□□ 1.93
NKX2-4-201ENST00000351817 SLC4A10Q6U841 1118 aa27.13■■□□□ 1.93
NKX2-4-201ENST00000351817 STK31Q9BXU1 1019 aa27.12■■□□□ 1.93
NKX2-4-201ENST00000351817 RBM33Q96EV2 1170 aaKnown RBP27.12■■□□□ 1.93
NKX2-4-201ENST00000351817 F6X3S4 739 aa27.11■■□□□ 1.93
NKX2-4-201ENST00000351817 OSBPL3Q9H4L5 887 aa27.1■■□□□ 1.93
NKX2-4-201ENST00000351817 CLEC17AQ6ZS10 378 aa27.09■■□□□ 1.93
NKX2-4-201ENST00000351817 USP54Q70EL1 1684 aa27.09■■□□□ 1.93
NKX2-4-201ENST00000351817 GNAI2P04899 355 aa27.09■■□□□ 1.93
NKX2-4-201ENST00000351817 FAM208AQ9UK61 1670 aaKnown RBP27.08■■□□□ 1.93
NKX2-4-201ENST00000351817 REC8O95072 547 aa27.08■■□□□ 1.93
NKX2-4-201ENST00000351817 NPHP4O75161 1426 aaPredicted RBP27.08■■□□□ 1.93
NKX2-4-201ENST00000351817 NLRP6P59044 892 aa27.08■■□□□ 1.92
NKX2-4-201ENST00000351817 CCDC30Q5VVM6 783 aa27.08■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms