RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 MSH6P52701 1360 aa17.68■□□□□ 0.42
NUP50-201ENST00000347635 UQCRHLA0A096LP55 91 aa17.67■□□□□ 0.42
NUP50-201ENST00000347635 UQCRHP07919 91 aa17.67■□□□□ 0.42
NUP50-201ENST00000347635 CABP4P57796 275 aa17.67■□□□□ 0.42
NUP50-201ENST00000347635 HMGN5P82970 282 aaKnown RBP17.67■□□□□ 0.42
NUP50-201ENST00000347635 AMOTQ4VCS5 1084 aa17.67■□□□□ 0.42
NUP50-201ENST00000347635 TBX22Q9Y458 520 aa17.67■□□□□ 0.42
NUP50-201ENST00000347635 CLCN1P35523 988 aa17.67■□□□□ 0.42
NUP50-201ENST00000347635 DCTN1Q14203 1278 aa17.67■□□□□ 0.42
NUP50-201ENST00000347635 ARHGAP45Q92619 1136 aa17.66■□□□□ 0.42
NUP50-201ENST00000347635 PANK2Q9BZ23 570 aa17.66■□□□□ 0.42
NUP50-201ENST00000347635 BAG4O95429 457 aaKnown RBP17.66■□□□□ 0.42
NUP50-201ENST00000347635 EMILIN1Q9Y6C2 1016 aa17.66■□□□□ 0.42
NUP50-201ENST00000347635 KLHL40Q2TBA0 621 aa17.66■□□□□ 0.42
NUP50-201ENST00000347635 NME9Q86XW9 330 aa17.65■□□□□ 0.42
NUP50-201ENST00000347635 MBIPQ9NS73 344 aa17.65■□□□□ 0.42
NUP50-201ENST00000347635 TTC22Q5TAA0 569 aa17.65■□□□□ 0.42
NUP50-201ENST00000347635 KRT28Q7Z3Y7 464 aa17.64■□□□□ 0.41
NUP50-201ENST00000347635 MCM10Q7L590 875 aa17.64■□□□□ 0.41
NUP50-201ENST00000347635 AEBP1Q8IUX7 1158 aa17.64■□□□□ 0.41
NUP50-201ENST00000347635 EXOC6BQ9Y2D4 811 aa17.64■□□□□ 0.41
NUP50-201ENST00000347635 MAP4K4O95819 1239 aaPredicted RBP17.64■□□□□ 0.41
NUP50-201ENST00000347635 GNAT3A8MTJ3 354 aa17.63■□□□□ 0.41
NUP50-201ENST00000347635 FOXO3O43524 673 aa17.63■□□□□ 0.41
NUP50-201ENST00000347635 MX1P20591 662 aa17.63■□□□□ 0.41
NUP50-201ENST00000347635 HDGFL1Q5TGJ6 251 aa17.63■□□□□ 0.41
NUP50-201ENST00000347635 KIF6Q6ZMV9 814 aa17.63■□□□□ 0.41
NUP50-201ENST00000347635 SMC5Q8IY18 1101 aa17.63■□□□□ 0.41
NUP50-201ENST00000347635 CCDC34Q96HJ3 373 aa17.63■□□□□ 0.41
NUP50-201ENST00000347635 HIP1O00291 1037 aa17.63■□□□□ 0.41
NUP50-201ENST00000347635 PDCP20941 246 aa17.63■□□□□ 0.41
NUP50-201ENST00000347635 XPCQ01831 940 aaPredicted RBP17.63■□□□□ 0.41
NUP50-201ENST00000347635 ACEP12821 1306 aa17.63■□□□□ 0.41
NUP50-201ENST00000347635 ZC3H6P61129 1189 aaKnown RBP17.63■□□□□ 0.41
NUP50-201ENST00000347635 FSD1Q9BTV5 496 aa17.63■□□□□ 0.41
NUP50-201ENST00000347635 CYP46A1Q9Y6A2 500 aa17.62■□□□□ 0.41
NUP50-201ENST00000347635 BCORL1Q5H9F3 1711 aa17.62■□□□□ 0.41
NUP50-201ENST00000347635 NUTM2BA6NNL0 878 aaPredicted RBP17.62■□□□□ 0.41
NUP50-201ENST00000347635 NUTM2EB1AL46 878 aaPredicted RBP17.62■□□□□ 0.41
NUP50-201ENST00000347635 NUTM2AQ8IVF1 878 aaPredicted RBP17.62■□□□□ 0.41
NUP50-201ENST00000347635 ZCCHC11Q5TAX3 1644 aaKnown RBP17.62■□□□□ 0.41
NUP50-201ENST00000347635 MLH3Q9UHC1 1453 aa17.62■□□□□ 0.41
NUP50-201ENST00000347635 CCDC73Q6ZRK6 1079 aa17.62■□□□□ 0.41
NUP50-201ENST00000347635 ERC1Q8IUD2 1116 aa17.62■□□□□ 0.41
NUP50-201ENST00000347635 ZBTB40Q9NUA8 1239 aa17.62■□□□□ 0.41
NUP50-201ENST00000347635 ZNF771Q7L3S4 317 aaPredicted RBP17.61■□□□□ 0.41
NUP50-201ENST00000347635 FYB1O15117 783 aa17.61■□□□□ 0.41
NUP50-201ENST00000347635 CCDC192P0DO97 292 aa17.61■□□□□ 0.41
NUP50-201ENST00000347635 PIP4K2BP78356 416 aa17.61■□□□□ 0.41
NUP50-201ENST00000347635 PTPRCP08575 1304 aa17.61■□□□□ 0.41
NUP50-201ENST00000347635 PKNOX2Q96KN3 472 aa17.61■□□□□ 0.41
NUP50-201ENST00000347635 RAB3GAP1Q15042 981 aa17.61■□□□□ 0.41
NUP50-201ENST00000347635 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.6■□□□□ 0.41
NUP50-201ENST00000347635 MRPL50Q8N5N7 158 aaKnown RBP17.6■□□□□ 0.41
NUP50-201ENST00000347635 TRIM5Q9C035 493 aa17.6■□□□□ 0.41
NUP50-201ENST00000347635 AIMP1Q12904 312 aaKnown RBP17.6■□□□□ 0.41
NUP50-201ENST00000347635 IL1RAPL2Q9NP60 686 aa17.6■□□□□ 0.41
NUP50-201ENST00000347635 MIS18AQ9NYP9 233 aa17.6■□□□□ 0.41
NUP50-201ENST00000347635 NPHP3Q7Z494 1330 aa17.59■□□□□ 0.41
NUP50-201ENST00000347635 MPNDQ8N594 471 aa17.59■□□□□ 0.41
NUP50-201ENST00000347635 KDM5AP29375 1690 aaKnown RBP17.59■□□□□ 0.41
NUP50-201ENST00000347635 ZSCAN23Q3MJ62 389 aa17.59■□□□□ 0.41
NUP50-201ENST00000347635 SPC24Q8NBT2 197 aa17.59■□□□□ 0.41
NUP50-201ENST00000347635 RBM42Q9BTD8 480 aaKnown RBP17.58■□□□□ 0.41
NUP50-201ENST00000347635 FOSBP53539 338 aa17.58■□□□□ 0.41
NUP50-201ENST00000347635 DDX54Q8TDD1 881 aaKnown RBP17.58■□□□□ 0.41
NUP50-201ENST00000347635 ABCC1P33527 1531 aa17.58■□□□□ 0.4
NUP50-201ENST00000347635 ARAP3Q8WWN8 1544 aa17.58■□□□□ 0.4
NUP50-201ENST00000347635 PREX2Q70Z35 1606 aa17.58■□□□□ 0.4
NUP50-201ENST00000347635 TRMT2AQ8IZ69 625 aaKnown RBP17.58■□□□□ 0.4
NUP50-201ENST00000347635 SYNMO15061 1565 aa17.58■□□□□ 0.4
NUP50-201ENST00000347635 SRGAP3O43295 1099 aa17.57■□□□□ 0.4
NUP50-201ENST00000347635 C19orf44Q9H6X5 657 aa17.57■□□□□ 0.4
NUP50-201ENST00000347635 KDM5DQ9BY66 1539 aa17.57■□□□□ 0.4
NUP50-201ENST00000347635 NOL10Q9BSC4 688 aaKnown RBP17.57■□□□□ 0.4
NUP50-201ENST00000347635 TRPM2O94759 1503 aa17.57■□□□□ 0.4
NUP50-201ENST00000347635 ZSCAN31Q96LW9 406 aaPredicted RBP17.57■□□□□ 0.4
NUP50-201ENST00000347635 PDRG1Q9NUG6 133 aa17.57■□□□□ 0.4
NUP50-201ENST00000347635 YTHDC2Q9H6S0 1430 aaKnown RBP17.57■□□□□ 0.4
NUP50-201ENST00000347635 TPD52L1Q16890 204 aaPredicted RBP17.57■□□□□ 0.4
NUP50-201ENST00000347635 CWC27Q6UX04 472 aaKnown RBP17.57■□□□□ 0.4
NUP50-201ENST00000347635 NUTM1Q86Y26 1132 aa17.57■□□□□ 0.4
NUP50-201ENST00000347635 ZNF521Q96K83 1311 aa17.57■□□□□ 0.4
NUP50-201ENST00000347635 PRDM15P57071 1507 aaPredicted RBP17.57■□□□□ 0.4
NUP50-201ENST00000347635 PPIP5K1Q6PFW1 1433 aa17.56■□□□□ 0.4
NUP50-201ENST00000347635 BTBD11A6QL63 1104 aa17.56■□□□□ 0.4
NUP50-201ENST00000347635 UPF3BQ9BZI7 483 aaKnown RBP17.56■□□□□ 0.4
NUP50-201ENST00000347635 KRT85P78386 507 aa17.56■□□□□ 0.4
NUP50-201ENST00000347635 UBE2Q2Q8WVN8 375 aa17.56■□□□□ 0.4
NUP50-201ENST00000347635 SAMD9LQ8IVG5 1584 aa17.56■□□□□ 0.4
NUP50-201ENST00000347635 FAM83GA6ND36 823 aa17.56■□□□□ 0.4
NUP50-201ENST00000347635 CPLX1O14810 134 aa17.56■□□□□ 0.4
NUP50-201ENST00000347635 ANKRD1Q15327 319 aa17.56■□□□□ 0.4
NUP50-201ENST00000347635 FBXW7Q969H0 707 aa17.56■□□□□ 0.4
NUP50-201ENST00000347635 RBM25P49756 843 aaKnown RBP17.55■□□□□ 0.4
NUP50-201ENST00000347635 NAT10Q9H0A0 1025 aaKnown RBP17.55■□□□□ 0.4
NUP50-201ENST00000347635 F6X3S4 739 aa17.55■□□□□ 0.4
NUP50-201ENST00000347635 TOM1O60784 492 aa17.55■□□□□ 0.4
NUP50-201ENST00000347635 JAKMIP1Q96N16 626 aaKnown RBP17.55■□□□□ 0.4
NUP50-201ENST00000347635 TNMDQ9H2S6 317 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms