RNA–Protein interactions for RNA: ENST00000343327.6

PTBP3-203, Transcript of polypyrimidine tract binding protein 3, humanhuman

TSL 2 BASIC

Gene PTBP3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-203ENST00000343327 ORAI2Q96SN7 254 aa10.48□□□□□ -0.73
PTBP3-203ENST00000343327 C1orf115Q9H7X2 142 aa10.48□□□□□ -0.73
PTBP3-203ENST00000343327 U2SURPO15042 1029 aaKnown RBP10.48□□□□□ -0.73
PTBP3-203ENST00000343327 NOB1Q9ULX3 412 aaKnown RBP10.48□□□□□ -0.73
PTBP3-203ENST00000343327 SSFA2P28290 1259 aa10.48□□□□□ -0.73
PTBP3-203ENST00000343327 SAFB2Q14151 953 aaKnown RBP eCLIP10.48□□□□□ -0.73
PTBP3-203ENST00000343327 KRT28Q7Z3Y7 464 aa10.48□□□□□ -0.73
PTBP3-203ENST00000343327 CHAMP1Q96JM3 812 aa10.48□□□□□ -0.73
PTBP3-203ENST00000343327 COL14A1Q05707 1796 aaKnown RBP10.48□□□□□ -0.73
PTBP3-203ENST00000343327 TTC21AQ8NDW8 1320 aa10.47□□□□□ -0.73
PTBP3-203ENST00000343327 SLIT3O75094 1523 aa10.47□□□□□ -0.73
PTBP3-203ENST00000343327 DDX11L8A8MPP1 907 aa10.47□□□□□ -0.73
PTBP3-203ENST00000343327 TMEM57Q8N5G2 664 aa10.47□□□□□ -0.73
PTBP3-203ENST00000343327 PPIP5K1Q6PFW1 1433 aa10.47□□□□□ -0.73
PTBP3-203ENST00000343327 FNBP4Q8N3X1 1017 aaPredicted RBP10.46□□□□□ -0.73
PTBP3-203ENST00000343327 MINK1Q8N4C8 1332 aaPredicted RBP10.46□□□□□ -0.73
PTBP3-203ENST00000343327 CPDO75976 1380 aa10.46□□□□□ -0.74
PTBP3-203ENST00000343327 USP31Q70CQ4 1352 aa10.46□□□□□ -0.74
PTBP3-203ENST00000343327 USP6P35125 1406 aa10.46□□□□□ -0.74
PTBP3-203ENST00000343327 FAM13BQ9NYF5 915 aa10.46□□□□□ -0.74
PTBP3-203ENST00000343327 SLIT2O94813 1529 aa10.46□□□□□ -0.74
PTBP3-203ENST00000343327 PHRF1Q9P1Y6 1649 aaKnown RBP10.45□□□□□ -0.74
PTBP3-203ENST00000343327 ELL2O00472 640 aaPredicted RBP10.45□□□□□ -0.74
PTBP3-203ENST00000343327 ANKRD45Q5TZF3 282 aa10.45□□□□□ -0.74
PTBP3-203ENST00000343327 DDX49Q9Y6V7 483 aaKnown RBP10.45□□□□□ -0.74
PTBP3-203ENST00000343327 NASPP49321 788 aaPredicted RBP10.44□□□□□ -0.74
PTBP3-203ENST00000343327 WDR63Q8IWG1 891 aa10.44□□□□□ -0.74
PTBP3-203ENST00000343327 GAS2L2Q8NHY3 880 aa10.44□□□□□ -0.74
PTBP3-203ENST00000343327 KIF2CQ99661 725 aa10.44□□□□□ -0.74
PTBP3-203ENST00000343327 ATRNO75882 1429 aa10.44□□□□□ -0.74
PTBP3-203ENST00000343327 PKP1Q13835 747 aa10.43□□□□□ -0.74
PTBP3-203ENST00000343327 FOXD4L5Q5VV16 416 aaPredicted RBP10.43□□□□□ -0.74
PTBP3-203ENST00000343327 MPNDQ8N594 471 aa10.43□□□□□ -0.74
PTBP3-203ENST00000343327 FOXD4L4Q8WXT5 416 aaPredicted RBP10.43□□□□□ -0.74
PTBP3-203ENST00000343327 R3HCC1Q9Y3T6 440 aaKnown RBP10.43□□□□□ -0.74
PTBP3-203ENST00000343327 FBLN1P23142 703 aa10.43□□□□□ -0.74
PTBP3-203ENST00000343327 DDIT3P35638 169 aa10.43□□□□□ -0.74
PTBP3-203ENST00000343327 GBP4Q96PP9 640 aa10.43□□□□□ -0.74
PTBP3-203ENST00000343327 EDC4Q6P2E9 1401 aaKnown RBP10.43□□□□□ -0.74
PTBP3-203ENST00000343327 NSD3Q9BZ95 1437 aa10.43□□□□□ -0.74
PTBP3-203ENST00000343327 XPCQ01831 940 aaPredicted RBP10.43□□□□□ -0.74
PTBP3-203ENST00000343327 RAB3GAP1Q15042 981 aa10.43□□□□□ -0.74
PTBP3-203ENST00000343327 ATF7IPQ6VMQ6 1270 aa10.43□□□□□ -0.74
PTBP3-203ENST00000343327 NRAPQ86VF7 1730 aa10.42□□□□□ -0.74
PTBP3-203ENST00000343327 FOXO3O43524 673 aa10.42□□□□□ -0.74
PTBP3-203ENST00000343327 MCTP1Q6DN14 999 aa10.42□□□□□ -0.74
PTBP3-203ENST00000343327 CAVIN1Q6NZI2 390 aaKnown RBP10.42□□□□□ -0.74
PTBP3-203ENST00000343327 PHF23Q9BUL5 403 aaPredicted RBP10.42□□□□□ -0.74
PTBP3-203ENST00000343327 PLCH1Q4KWH8 1693 aa10.42□□□□□ -0.74
PTBP3-203ENST00000343327 ACEP12821 1306 aa10.41□□□□□ -0.74
PTBP3-203ENST00000343327 TPRNQ4KMQ1 711 aa10.41□□□□□ -0.74
PTBP3-203ENST00000343327 SMC5Q8IY18 1101 aa10.41□□□□□ -0.74
PTBP3-203ENST00000343327 NGDNQ8NEJ9 315 aaKnown RBP10.41□□□□□ -0.74
PTBP3-203ENST00000343327 DDX19BQ9UMR2 479 aa10.41□□□□□ -0.74
PTBP3-203ENST00000343327 CD163L1Q9NR16 1453 aa10.41□□□□□ -0.74
PTBP3-203ENST00000343327 CHD1LQ86WJ1 897 aa10.41□□□□□ -0.74
PTBP3-203ENST00000343327 ZBTB40Q9NUA8 1239 aa10.41□□□□□ -0.74
PTBP3-203ENST00000343327 APBB1O00213 710 aa10.4□□□□□ -0.74
PTBP3-203ENST00000343327 MSNP26038 577 aaKnown RBP10.4□□□□□ -0.74
PTBP3-203ENST00000343327 RBM25P49756 843 aaKnown RBP10.4□□□□□ -0.74
PTBP3-203ENST00000343327 RIPK4P57078 832 aa10.4□□□□□ -0.74
PTBP3-203ENST00000343327 SRPK2P78362 688 aaKnown RBP10.4□□□□□ -0.74
PTBP3-203ENST00000343327 HDAC1Q13547 482 aaPredicted RBP10.4□□□□□ -0.74
PTBP3-203ENST00000343327 GGNBP2Q9H3C7 697 aa10.4□□□□□ -0.74
PTBP3-203ENST00000343327 TERF2IPQ9NYB0 399 aa10.4□□□□□ -0.74
PTBP3-203ENST00000343327 LMO7Q8WWI1 1683 aa10.4□□□□□ -0.74
PTBP3-203ENST00000343327 TBC1D9Q6ZT07 1266 aa10.4□□□□□ -0.74
PTBP3-203ENST00000343327 NGEFQ8N5V2 710 aa10.4□□□□□ -0.74
PTBP3-203ENST00000343327 THUMPD2Q9BTF0 503 aaKnown RBP10.4□□□□□ -0.74
PTBP3-203ENST00000343327 RBM27Q9P2N5 1060 aaKnown RBP10.4□□□□□ -0.74
PTBP3-203ENST00000343327 AK9Q5TCS8 1911 aa10.4□□□□□ -0.75
PTBP3-203ENST00000343327 ANKRD36BQ8N2N9 1353 aa10.4□□□□□ -0.75
PTBP3-203ENST00000343327 NPC1L1Q9UHC9 1359 aa10.4□□□□□ -0.75
PTBP3-203ENST00000343327 PIK3C2AO00443 1686 aa10.39□□□□□ -0.75
PTBP3-203ENST00000343327 VIRMAQ69YN4 1812 aaKnown RBP10.39□□□□□ -0.75
PTBP3-203ENST00000343327 NUCB1Q02818 461 aa10.39□□□□□ -0.75
PTBP3-203ENST00000343327 JARID2Q92833 1246 aaPredicted RBP10.39□□□□□ -0.75
PTBP3-203ENST00000343327 CFAP53Q96M91 514 aa10.39□□□□□ -0.75
PTBP3-203ENST00000343327 BAG4O95429 457 aaKnown RBP10.39□□□□□ -0.75
PTBP3-203ENST00000343327 ZSCAN30Q86W11 494 aa10.39□□□□□ -0.75
PTBP3-203ENST00000343327 ANP32BQ92688 251 aaKnown RBP10.39□□□□□ -0.75
PTBP3-203ENST00000343327 PDCL3Q9H2J4 239 aa10.39□□□□□ -0.75
PTBP3-203ENST00000343327 CABP2Q9NPB3 220 aa10.39□□□□□ -0.75
PTBP3-203ENST00000343327 RGS17Q9UGC6 210 aaPredicted RBP10.39□□□□□ -0.75
PTBP3-203ENST00000343327 TRIM35Q9UPQ4 493 aa10.39□□□□□ -0.75
PTBP3-203ENST00000343327 KIF24Q5T7B8 1368 aa10.39□□□□□ -0.75
PTBP3-203ENST00000343327 PLEKHG2Q9H7P9 1386 aa10.39□□□□□ -0.75
PTBP3-203ENST00000343327 K7ELQ4 463 aaPredicted RBP10.38□□□□□ -0.75
PTBP3-203ENST00000343327 TMPOP42166 694 aaKnown RBP10.38□□□□□ -0.75
PTBP3-203ENST00000343327 FOXD4L6Q3SYB3 417 aaPredicted RBP10.38□□□□□ -0.75
PTBP3-203ENST00000343327 MEX3CQ5U5Q3 659 aaKnown RBP10.38□□□□□ -0.75
PTBP3-203ENST00000343327 FOXD4L3Q6VB84 417 aaPredicted RBP10.38□□□□□ -0.75
PTBP3-203ENST00000343327 BCL9LQ86UU0 1499 aa10.38□□□□□ -0.75
PTBP3-203ENST00000343327 KCNH5Q8NCM2 988 aa10.38□□□□□ -0.75
PTBP3-203ENST00000343327 RNF214Q8ND24 703 aa10.38□□□□□ -0.75
PTBP3-203ENST00000343327 SNX21Q969T3 373 aa10.38□□□□□ -0.75
PTBP3-203ENST00000343327 RBSNQ9H1K0 784 aa10.38□□□□□ -0.75
PTBP3-203ENST00000343327 TRPC5Q9UL62 973 aaPredicted RBP10.38□□□□□ -0.75
PTBP3-203ENST00000343327 PRPF40AO75400 957 aaKnown RBP10.37□□□□□ -0.75
PTBP3-203ENST00000343327 PRIM1P49642 420 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms