RNA–Protein interactions for RNA: ENST00000341290.6

PERM1-201, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PERM1, Length 3,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-201ENST00000341290 RRS1Q15050 365 aaKnown RBP18.99■□□□□ 0.63
PERM1-201ENST00000341290 NME9Q86XW9 330 aa18.99■□□□□ 0.63
PERM1-201ENST00000341290 MON2Q7Z3U7 1717 aa18.99■□□□□ 0.63
PERM1-201ENST00000341290 NFE2L2Q16236 605 aa18.99■□□□□ 0.63
PERM1-201ENST00000341290 DDIT3P35638 169 aa18.98■□□□□ 0.63
PERM1-201ENST00000341290 KIF1AQ12756 1690 aa18.98■□□□□ 0.63
PERM1-201ENST00000341290 USP54Q70EL1 1684 aa18.98■□□□□ 0.63
PERM1-201ENST00000341290 MRE11P49959 708 aa18.98■□□□□ 0.63
PERM1-201ENST00000341290 TWISTNBQ3B726 338 aaPredicted RBP18.98■□□□□ 0.63
PERM1-201ENST00000341290 C16orf71Q8IYS4 520 aaPredicted RBP18.98■□□□□ 0.63
PERM1-201ENST00000341290 RRP9O43818 475 aaKnown RBP18.97■□□□□ 0.63
PERM1-201ENST00000341290 RGPD8O14715 1765 aaPredicted RBP18.97■□□□□ 0.63
PERM1-201ENST00000341290 SSFA2P28290 1259 aa18.97■□□□□ 0.63
PERM1-201ENST00000341290 SNX21Q969T3 373 aa18.97■□□□□ 0.63
PERM1-201ENST00000341290 PNPLA6Q8IY17 1366 aa18.96■□□□□ 0.63
PERM1-201ENST00000341290 KRT24Q2M2I5 525 aa18.96■□□□□ 0.63
PERM1-201ENST00000341290 GAS2L2Q8NHY3 880 aa18.96■□□□□ 0.63
PERM1-201ENST00000341290 NRKQ7Z2Y5 1582 aa18.96■□□□□ 0.63
PERM1-201ENST00000341290 ATP7BP35670 1465 aa18.96■□□□□ 0.63
PERM1-201ENST00000341290 GCC1Q96CN9 775 aa18.95■□□□□ 0.62
PERM1-201ENST00000341290 RAB3GAP1Q15042 981 aa18.94■□□□□ 0.62
PERM1-201ENST00000341290 GBP4Q96PP9 640 aa18.94■□□□□ 0.62
PERM1-201ENST00000341290 K7ELQ4 463 aaPredicted RBP18.94■□□□□ 0.62
PERM1-201ENST00000341290 GNAI1P63096 354 aa18.94■□□□□ 0.62
PERM1-201ENST00000341290 GSPT1P15170 499 aaKnown RBP18.93■□□□□ 0.62
PERM1-201ENST00000341290 OTUD7AQ8TE49 926 aaPredicted RBP18.93■□□□□ 0.62
PERM1-201ENST00000341290 KIF20BQ96Q89 1820 aa18.93■□□□□ 0.62
PERM1-201ENST00000341290 ERBB4Q15303 1308 aa18.92■□□□□ 0.62
PERM1-201ENST00000341290 SMARCA5O60264 1052 aaPredicted RBP18.91■□□□□ 0.62
PERM1-201ENST00000341290 IL13P35225 146 aa18.91■□□□□ 0.62
PERM1-201ENST00000341290 A0A0U1RQG5 324 aaPredicted RBP18.9■□□□□ 0.62
PERM1-201ENST00000341290 IFT57Q9NWB7 429 aa18.9■□□□□ 0.62
PERM1-201ENST00000341290 SOX12O15370 315 aa18.9■□□□□ 0.62
PERM1-201ENST00000341290 CDC45O75419 566 aa18.9■□□□□ 0.62
PERM1-201ENST00000341290 PLEKHM2Q8IWE5 1019 aa18.89■□□□□ 0.61
PERM1-201ENST00000341290 ABCC4O15439 1325 aa18.89■□□□□ 0.61
PERM1-201ENST00000341290 NCLP19338 710 aaKnown RBP18.89■□□□□ 0.61
PERM1-201ENST00000341290 AEBP1Q8IUX7 1158 aa18.89■□□□□ 0.61
PERM1-201ENST00000341290 ARHGAP45Q92619 1136 aa18.88■□□□□ 0.61
PERM1-201ENST00000341290 TRIM44Q96DX7 344 aaPredicted RBP18.88■□□□□ 0.61
PERM1-201ENST00000341290 NUTM2FA1L443 756 aa18.88■□□□□ 0.61
PERM1-201ENST00000341290 CLCN1P35523 988 aa18.88■□□□□ 0.61
PERM1-201ENST00000341290 WASLO00401 505 aaPredicted RBP18.87■□□□□ 0.61
PERM1-201ENST00000341290 AEBP2Q6ZN18 517 aaPredicted RBP18.87■□□□□ 0.61
PERM1-201ENST00000341290 CFAP44Q96MT7 982 aa18.87■□□□□ 0.61
PERM1-201ENST00000341290 BRPF1P55201 1214 aaPredicted RBP18.87■□□□□ 0.61
PERM1-201ENST00000341290 CALD1Q05682 793 aaKnown RBP18.87■□□□□ 0.61
PERM1-201ENST00000341290 PKP1Q13835 747 aa18.87■□□□□ 0.61
PERM1-201ENST00000341290 ZNF428Q96B54 188 aa18.87■□□□□ 0.61
PERM1-201ENST00000341290 CIZ1Q9ULV3 898 aaPredicted RBP18.87■□□□□ 0.61
PERM1-201ENST00000341290 AK9Q5TCS8 1911 aa18.87■□□□□ 0.61
PERM1-201ENST00000341290 NHSL1Q5SYE7 1610 aa18.87■□□□□ 0.61
PERM1-201ENST00000341290 ZNF853P0CG23 659 aa18.87■□□□□ 0.61
PERM1-201ENST00000341290 DDX49Q9Y6V7 483 aaKnown RBP18.87■□□□□ 0.61
PERM1-201ENST00000341290 TMEM94Q12767 1356 aa18.87■□□□□ 0.61
PERM1-201ENST00000341290 ESPNB1AK53 854 aa18.86■□□□□ 0.61
PERM1-201ENST00000341290 MCM10Q7L590 875 aa18.86■□□□□ 0.61
PERM1-201ENST00000341290 TRPM3Q9HCF6 1732 aaPredicted RBP18.86■□□□□ 0.61
PERM1-201ENST00000341290 CHAMP1Q96JM3 812 aa18.86■□□□□ 0.61
PERM1-201ENST00000341290 MIS18AQ9NYP9 233 aa18.86■□□□□ 0.61
PERM1-201ENST00000341290 MST1RQ04912 1400 aa18.86■□□□□ 0.61
PERM1-201ENST00000341290 ZNF335Q9H4Z2 1342 aaPredicted RBP18.86■□□□□ 0.61
PERM1-201ENST00000341290 CHMP4BQ9H444 224 aaKnown RBP18.85■□□□□ 0.61
PERM1-201ENST00000341290 CPSF1Q10570 1443 aaKnown RBP18.85■□□□□ 0.61
PERM1-201ENST00000341290 MCTP1Q6DN14 999 aa18.85■□□□□ 0.61
PERM1-201ENST00000341290 API5Q9BZZ5 524 aaKnown RBP18.85■□□□□ 0.61
PERM1-201ENST00000341290 COG3Q96JB2 828 aa18.84■□□□□ 0.61
PERM1-201ENST00000341290 MAP2P11137 1827 aaKnown RBP18.84■□□□□ 0.61
PERM1-201ENST00000341290 FOXD4L5Q5VV16 416 aaPredicted RBP18.84■□□□□ 0.61
PERM1-201ENST00000341290 FOXD4L4Q8WXT5 416 aaPredicted RBP18.84■□□□□ 0.61
PERM1-201ENST00000341290 BAG4O95429 457 aaKnown RBP18.83■□□□□ 0.61
PERM1-201ENST00000341290 MARF1Q9Y4F3 1742 aaKnown RBP18.83■□□□□ 0.6
PERM1-201ENST00000341290 SULT6B1Q6IMI4 303 aa18.83■□□□□ 0.6
PERM1-201ENST00000341290 TTC22Q5TAA0 569 aa18.82■□□□□ 0.6
PERM1-201ENST00000341290 DCTPP1Q9H773 170 aa18.82■□□□□ 0.6
PERM1-201ENST00000341290 GOLGA6L22H0YM25 854 aa18.81■□□□□ 0.6
PERM1-201ENST00000341290 SKOR2Q2VWA4 1001 aaPredicted RBP18.81■□□□□ 0.6
PERM1-201ENST00000341290 NUDT16Q96DE0 195 aaKnown RBP18.81■□□□□ 0.6
PERM1-201ENST00000341290 MEIS3Q99687 375 aa18.81■□□□□ 0.6
PERM1-201ENST00000341290 C19orf44Q9H6X5 657 aa18.81■□□□□ 0.6
PERM1-201ENST00000341290 SDSP20132 328 aa18.81■□□□□ 0.6
PERM1-201ENST00000341290 TSHZ3Q63HK5 1081 aa18.81■□□□□ 0.6
PERM1-201ENST00000341290 SLC4A10Q6U841 1118 aa18.81■□□□□ 0.6
PERM1-201ENST00000341290 ZGPATQ8N5A5 531 aaKnown RBP18.81■□□□□ 0.6
PERM1-201ENST00000341290 C1orf167Q5SNV9 1468 aa18.8■□□□□ 0.6
PERM1-201ENST00000341290 SSH2Q76I76 1423 aa18.8■□□□□ 0.6
PERM1-201ENST00000341290 PRR36Q9H6K5 1346 aa18.8■□□□□ 0.6
PERM1-201ENST00000341290 PLEKHG3A1L390 1219 aa18.8■□□□□ 0.6
PERM1-201ENST00000341290 CAVIN1Q6NZI2 390 aaKnown RBP18.8■□□□□ 0.6
PERM1-201ENST00000341290 PROSER2Q86WR7 435 aaPredicted RBP18.8■□□□□ 0.6
PERM1-201ENST00000341290 USP26Q9BXU7 913 aa18.8■□□□□ 0.6
PERM1-201ENST00000341290 NASPP49321 788 aaPredicted RBP18.79■□□□□ 0.6
PERM1-201ENST00000341290 LMOD3Q0VAK6 560 aa18.79■□□□□ 0.6
PERM1-201ENST00000341290 ALS2Q96Q42 1657 aa18.79■□□□□ 0.6
PERM1-201ENST00000341290 F6X3S4 739 aa18.78■□□□□ 0.6
PERM1-201ENST00000341290 MSH6P52701 1360 aa18.78■□□□□ 0.6
PERM1-201ENST00000341290 AHDC1Q5TGY3 1603 aaPredicted RBP18.78■□□□□ 0.6
PERM1-201ENST00000341290 CEP85Q6P2H3 762 aa18.78■□□□□ 0.6
PERM1-201ENST00000341290 CRYBG1Q9Y4K1 1723 aa18.78■□□□□ 0.6
PERM1-201ENST00000341290 RABEP1Q15276 862 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms