RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 ANKRD20A12PQ8NF67 263 aa23.08■■□□□ 1.28
CDK13-202ENST00000340829 KINO60870 393 aaKnown RBP23.07■■□□□ 1.28
CDK13-202ENST00000340829 BLOC1S2Q6QNY1 142 aa23.07■■□□□ 1.28
CDK13-202ENST00000340829 PHF8Q9UPP1 1060 aa23.07■■□□□ 1.28
CDK13-202ENST00000340829 TRIM5Q9C035 493 aa23.07■■□□□ 1.28
CDK13-202ENST00000340829 KIF1BPQ96EK5 621 aa23.07■■□□□ 1.28
CDK13-202ENST00000340829 TBC1D2Q9BYX2 928 aa23.07■■□□□ 1.28
CDK13-202ENST00000340829 PDRG1Q9NUG6 133 aa23.07■■□□□ 1.28
CDK13-202ENST00000340829 UPF3BQ9BZI7 483 aaKnown RBP23.07■■□□□ 1.28
CDK13-202ENST00000340829 ANKRD1Q15327 319 aa23.06■■□□□ 1.28
CDK13-202ENST00000340829 CCDC57Q2TAC2 916 aa23.06■■□□□ 1.28
CDK13-202ENST00000340829 ASXL2Q76L83 1435 aa23.06■■□□□ 1.28
CDK13-202ENST00000340829 FKBP4Q02790 459 aaKnown RBP eCLIP23.06■■□□□ 1.28
CDK13-202ENST00000340829 SART3Q15020 963 aaKnown RBP23.06■■□□□ 1.28
CDK13-202ENST00000340829 LARP1BQ659C4 914 aaKnown RBP23.06■■□□□ 1.28
CDK13-202ENST00000340829 FOXO3O43524 673 aa23.06■■□□□ 1.28
CDK13-202ENST00000340829 MPRIPQ6WCQ1 1025 aa23.06■■□□□ 1.28
CDK13-202ENST00000340829 CCDC47Q96A33 483 aaKnown RBP23.06■■□□□ 1.28
CDK13-202ENST00000340829 CCDC173Q0VFZ6 552 aa23.05■■□□□ 1.28
CDK13-202ENST00000340829 AEBP1Q8IUX7 1158 aa23.05■■□□□ 1.28
CDK13-202ENST00000340829 NAT10Q9H0A0 1025 aaKnown RBP23.05■■□□□ 1.28
CDK13-202ENST00000340829 LRRFIP2Q9Y608 721 aaKnown RBP23.05■■□□□ 1.28
CDK13-202ENST00000340829 NCBP3Q53F19 620 aaKnown RBP23.04■■□□□ 1.28
CDK13-202ENST00000340829 CCDC85AQ96PX6 553 aaPredicted RBP23.04■■□□□ 1.28
CDK13-202ENST00000340829 A2MP01023 1474 aa23.04■■□□□ 1.28
CDK13-202ENST00000340829 PZPP20742 1482 aa23.04■■□□□ 1.28
CDK13-202ENST00000340829 ACEP12821 1306 aa23.04■■□□□ 1.28
CDK13-202ENST00000340829 BCL11BQ9C0K0 894 aaPredicted RBP23.03■■□□□ 1.28
CDK13-202ENST00000340829 FMNL2Q96PY5 1086 aa23.03■■□□□ 1.28
CDK13-202ENST00000340829 PCDHB15Q9Y5E8 787 aa23.03■■□□□ 1.28
CDK13-202ENST00000340829 IL16Q14005 1332 aa23.03■■□□□ 1.28
CDK13-202ENST00000340829 FLIIQ13045 1269 aa23.03■■□□□ 1.28
CDK13-202ENST00000340829 STK38Q15208 465 aa23.03■■□□□ 1.28
CDK13-202ENST00000340829 MPNDQ8N594 471 aa23.03■■□□□ 1.28
CDK13-202ENST00000340829 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.03■■□□□ 1.28
CDK13-202ENST00000340829 A0A0U1RQG5 324 aaPredicted RBP23.02■■□□□ 1.28
CDK13-202ENST00000340829 XBP1P17861 261 aa23.02■■□□□ 1.28
CDK13-202ENST00000340829 CEP126Q9P2H0 1117 aa23.02■■□□□ 1.28
CDK13-202ENST00000340829 CASTP20810 708 aaKnown RBP23.02■■□□□ 1.28
CDK13-202ENST00000340829 STK11IPQ8N1F8 1099 aa23.02■■□□□ 1.28
CDK13-202ENST00000340829 IPO7O95373 1038 aaKnown RBP23.02■■□□□ 1.27
CDK13-202ENST00000340829 OLFM4Q6UX06 510 aa23.02■■□□□ 1.27
CDK13-202ENST00000340829 KRT85P78386 507 aa23.01■■□□□ 1.27
CDK13-202ENST00000340829 ZNF396Q96N95 335 aaPredicted RBP23.01■■□□□ 1.27
CDK13-202ENST00000340829 BRMS1Q9HCU9 246 aa23.01■■□□□ 1.27
CDK13-202ENST00000340829 RAB11FIP3O75154 756 aa23.01■■□□□ 1.27
CDK13-202ENST00000340829 GLRX3O76003 335 aaKnown RBP23.01■■□□□ 1.27
CDK13-202ENST00000340829 PTCD1O75127 700 aaKnown RBP23■■□□□ 1.27
CDK13-202ENST00000340829 CARD14Q9BXL6 1004 aa23■■□□□ 1.27
CDK13-202ENST00000340829 TTC21BQ7Z4L5 1316 aa23■■□□□ 1.27
CDK13-202ENST00000340829 PTPRCP08575 1304 aa23■■□□□ 1.27
CDK13-202ENST00000340829 DNAAF4Q8WXU2 420 aa23■■□□□ 1.27
CDK13-202ENST00000340829 PPP6R1Q9UPN7 881 aa23■■□□□ 1.27
CDK13-202ENST00000340829 PER1O15534 1290 aaPredicted RBP22.99■■□□□ 1.27
CDK13-202ENST00000340829 PLEKHH1Q9ULM0 1364 aa22.99■■□□□ 1.27
CDK13-202ENST00000340829 AMOTQ4VCS5 1084 aa22.99■■□□□ 1.27
CDK13-202ENST00000340829 SPC24Q8NBT2 197 aa22.99■■□□□ 1.27
CDK13-202ENST00000340829 SHANK2Q9UPX8 1470 aa22.98■■□□□ 1.27
CDK13-202ENST00000340829 TBC1D9Q6ZT07 1266 aa22.98■■□□□ 1.27
CDK13-202ENST00000340829 ZSCAN31Q96LW9 406 aaPredicted RBP22.98■■□□□ 1.27
CDK13-202ENST00000340829 HSP90AB2PQ58FF8 381 aa22.98■■□□□ 1.27
CDK13-202ENST00000340829 BOLA2Q9H3K6 86 aa22.98■■□□□ 1.27
CDK13-202ENST00000340829 TNNQ9UQP3 1299 aa22.98■■□□□ 1.27
CDK13-202ENST00000340829 LARP1Q6PKG0 1096 aaKnown RBP22.98■■□□□ 1.27
CDK13-202ENST00000340829 MYD88Q99836 296 aa22.98■■□□□ 1.27
CDK13-202ENST00000340829 PRPF40BQ6NWY9 871 aaKnown RBP22.97■■□□□ 1.27
CDK13-202ENST00000340829 DNMT1P26358 1616 aaKnown RBP22.97■■□□□ 1.27
CDK13-202ENST00000340829 BMP2KLQ5H9B9 411 aa22.97■■□□□ 1.27
CDK13-202ENST00000340829 WDR7Q9Y4E6 1490 aa22.97■■□□□ 1.27
CDK13-202ENST00000340829 CCDC192P0DO97 292 aa22.97■■□□□ 1.27
CDK13-202ENST00000340829 ME1P48163 572 aa22.97■■□□□ 1.27
CDK13-202ENST00000340829 MPHOSPH8Q99549 860 aa22.97■■□□□ 1.27
CDK13-202ENST00000340829 TNMDQ9H2S6 317 aa22.97■■□□□ 1.27
CDK13-202ENST00000340829 POLR3AO14802 1390 aaPredicted RBP22.96■■□□□ 1.27
CDK13-202ENST00000340829 PDILTQ8N807 584 aa22.96■■□□□ 1.27
CDK13-202ENST00000340829 DISP1Q96F81 1524 aa22.96■■□□□ 1.27
CDK13-202ENST00000340829 ARHGEF12Q9NZN5 1544 aa22.96■■□□□ 1.27
CDK13-202ENST00000340829 CEP89Q96ST8 783 aa22.96■■□□□ 1.27
CDK13-202ENST00000340829 SMC2O95347 1197 aa22.96■■□□□ 1.27
CDK13-202ENST00000340829 VSIG10Q8N0Z9 540 aa22.96■■□□□ 1.27
CDK13-202ENST00000340829 SPINK5Q9NQ38 1064 aaPredicted RBP22.96■■□□□ 1.27
CDK13-202ENST00000340829 ZNF518AQ6AHZ1 1483 aa22.95■■□□□ 1.27
CDK13-202ENST00000340829 ZRANB1Q9UGI0 708 aa22.95■■□□□ 1.26
CDK13-202ENST00000340829 NUTM2BA6NNL0 878 aaPredicted RBP22.95■■□□□ 1.26
CDK13-202ENST00000340829 NUTM2EB1AL46 878 aaPredicted RBP22.95■■□□□ 1.26
CDK13-202ENST00000340829 NUTM2AQ8IVF1 878 aaPredicted RBP22.95■■□□□ 1.26
CDK13-202ENST00000340829 TBC1D32Q96NH3 1257 aa22.95■■□□□ 1.26
CDK13-202ENST00000340829 CCDC8Q9H0W5 538 aaPredicted RBP22.95■■□□□ 1.26
CDK13-202ENST00000340829 TSHZ3Q63HK5 1081 aa22.94■■□□□ 1.26
CDK13-202ENST00000340829 SAMD1Q6SPF0 538 aaPredicted RBP22.94■■□□□ 1.26
CDK13-202ENST00000340829 CCDC83Q8IWF9 413 aa22.94■■□□□ 1.26
CDK13-202ENST00000340829 SSFA2P28290 1259 aa22.94■■□□□ 1.26
CDK13-202ENST00000340829 SPATA32Q96LK8 384 aa22.94■■□□□ 1.26
CDK13-202ENST00000340829 DBF4Q9UBU7 674 aaPredicted RBP22.94■■□□□ 1.26
CDK13-202ENST00000340829 KRT32Q14532 448 aa22.93■■□□□ 1.26
CDK13-202ENST00000340829 KIF21AQ7Z4S6 1674 aa22.93■■□□□ 1.26
CDK13-202ENST00000340829 EIF2AK4Q9P2K8 1649 aaKnown RBP22.93■■□□□ 1.26
CDK13-202ENST00000340829 HDAC1Q13547 482 aaPredicted RBP22.93■■□□□ 1.26
CDK13-202ENST00000340829 FERMT3Q86UX7 667 aa22.93■■□□□ 1.26
CDK13-202ENST00000340829 GNL3LQ9NVN8 582 aaKnown RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms