RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 CPSF1Q10570 1443 aaKnown RBP14.78□□□□□ -0.04
C2orf88-201ENST00000340623 ERICH6BQ5W0A0 696 aa14.78□□□□□ -0.04
C2orf88-201ENST00000340623 ZNF428Q96B54 188 aa14.78□□□□□ -0.04
C2orf88-201ENST00000340623 CFAP44Q96MT7 982 aa14.78□□□□□ -0.04
C2orf88-201ENST00000340623 MBIPQ9NS73 344 aa14.78□□□□□ -0.04
C2orf88-201ENST00000340623 NOB1Q9ULX3 412 aaKnown RBP14.78□□□□□ -0.04
C2orf88-201ENST00000340623 ARHGEF28Q8N1W1 1705 aaKnown RBP14.78□□□□□ -0.04
C2orf88-201ENST00000340623 IL2RBP14784 551 aa14.77□□□□□ -0.04
C2orf88-201ENST00000340623 ADAMTSL3P82987 1691 aa14.77□□□□□ -0.04
C2orf88-201ENST00000340623 RWDD1Q9H446 243 aaPredicted RBP14.77□□□□□ -0.05
C2orf88-201ENST00000340623 TMOD3Q9NYL9 352 aa14.77□□□□□ -0.05
C2orf88-201ENST00000340623 SPINK5Q9NQ38 1064 aaPredicted RBP14.76□□□□□ -0.05
C2orf88-201ENST00000340623 DDX58O95786 925 aaKnown RBP14.76□□□□□ -0.05
C2orf88-201ENST00000340623 NEXNQ0ZGT2 675 aa14.76□□□□□ -0.05
C2orf88-201ENST00000340623 SSH1Q8WYL5 1049 aa14.76□□□□□ -0.05
C2orf88-201ENST00000340623 INSRP06213 1382 aa14.76□□□□□ -0.05
C2orf88-201ENST00000340623 MYL6BP14649 208 aa14.76□□□□□ -0.05
C2orf88-201ENST00000340623 RIC3Q7Z5B4 369 aa14.76□□□□□ -0.05
C2orf88-201ENST00000340623 C9orf78Q9NZ63 289 aaPredicted RBP14.75□□□□□ -0.05
C2orf88-201ENST00000340623 SLC39A6Q13433 755 aa14.75□□□□□ -0.05
C2orf88-201ENST00000340623 AKAP4Q5JQC9 854 aa14.75□□□□□ -0.05
C2orf88-201ENST00000340623 DDX19BQ9UMR2 479 aa14.75□□□□□ -0.05
C2orf88-201ENST00000340623 NKTRP30414 1462 aaKnown RBP14.75□□□□□ -0.05
C2orf88-201ENST00000340623 LARP1Q6PKG0 1096 aaKnown RBP14.74□□□□□ -0.05
C2orf88-201ENST00000340623 GTF2E1P29083 439 aaPredicted RBP14.74□□□□□ -0.05
C2orf88-201ENST00000340623 RARSP54136 660 aaKnown RBP14.74□□□□□ -0.05
C2orf88-201ENST00000340623 DDB1Q16531 1140 aa14.74□□□□□ -0.05
C2orf88-201ENST00000340623 CCDC27Q2M243 656 aa14.74□□□□□ -0.05
C2orf88-201ENST00000340623 CPS1P31327 1500 aa14.74□□□□□ -0.05
C2orf88-201ENST00000340623 KRT24Q2M2I5 525 aa14.73□□□□□ -0.05
C2orf88-201ENST00000340623 CT47B1P0C2W7 299 aaPredicted RBP14.73□□□□□ -0.05
C2orf88-201ENST00000340623 UPF2Q9HAU5 1272 aaKnown RBP14.73□□□□□ -0.05
C2orf88-201ENST00000340623 CDC42BPGQ6DT37 1551 aa14.72□□□□□ -0.05
C2orf88-201ENST00000340623 ACSBG1Q96GR2 724 aa14.72□□□□□ -0.05
C2orf88-201ENST00000340623 TRIM35Q9UPQ4 493 aa14.72□□□□□ -0.05
C2orf88-201ENST00000340623 IFT172Q9UG01 1749 aa14.72□□□□□ -0.05
C2orf88-201ENST00000340623 CERKQ8TCT0 537 aa14.72□□□□□ -0.05
C2orf88-201ENST00000340623 AXIN2Q9Y2T1 843 aa14.72□□□□□ -0.05
C2orf88-201ENST00000340623 ATF7IPQ6VMQ6 1270 aa14.72□□□□□ -0.05
C2orf88-201ENST00000340623 NFATC2IPQ8NCF5 419 aa14.71□□□□□ -0.05
C2orf88-201ENST00000340623 UBE2Q2Q8WVN8 375 aa14.71□□□□□ -0.05
C2orf88-201ENST00000340623 LGR6Q9HBX8 967 aa14.71□□□□□ -0.05
C2orf88-201ENST00000340623 MAP3K5Q99683 1374 aa14.71□□□□□ -0.05
C2orf88-201ENST00000340623 IL16Q14005 1332 aa14.71□□□□□ -0.06
C2orf88-201ENST00000340623 MED14O60244 1454 aa14.71□□□□□ -0.06
C2orf88-201ENST00000340623 HMMRO75330 724 aa14.7□□□□□ -0.06
C2orf88-201ENST00000340623 C20orf194Q5TEA3 1177 aa14.7□□□□□ -0.06
C2orf88-201ENST00000340623 C8orf58Q8NAV2 365 aa14.7□□□□□ -0.06
C2orf88-201ENST00000340623 ERBB3P21860 1342 aa14.7□□□□□ -0.06
C2orf88-201ENST00000340623 ANXA1P04083 346 aa14.7□□□□□ -0.06
C2orf88-201ENST00000340623 TNS3Q68CZ2 1445 aa14.7□□□□□ -0.06
C2orf88-201ENST00000340623 NOP58Q9Y2X3 529 aaKnown RBP14.7□□□□□ -0.06
C2orf88-201ENST00000340623 FAM98CQ17RN3 349 aaKnown RBP14.69□□□□□ -0.06
C2orf88-201ENST00000340623 SKAP1Q86WV1 359 aa14.69□□□□□ -0.06
C2orf88-201ENST00000340623 TSPYL6Q8N831 410 aa14.69□□□□□ -0.06
C2orf88-201ENST00000340623 C1orf115Q9H7X2 142 aa14.69□□□□□ -0.06
C2orf88-201ENST00000340623 HDAC5Q9UQL6 1122 aa14.69□□□□□ -0.06
C2orf88-201ENST00000340623 IGSF1Q8N6C5 1336 aa14.69□□□□□ -0.06
C2orf88-201ENST00000340623 TAF7LQ5H9L4 462 aa14.69□□□□□ -0.06
C2orf88-201ENST00000340623 USP21Q9UK80 565 aa14.69□□□□□ -0.06
C2orf88-201ENST00000340623 FAM177BA6PVY3 158 aa14.68□□□□□ -0.06
C2orf88-201ENST00000340623 BLMP54132 1417 aaPredicted RBP14.68□□□□□ -0.06
C2orf88-201ENST00000340623 RNMTO43148 476 aaKnown RBP14.68□□□□□ -0.06
C2orf88-201ENST00000340623 PDE3AQ14432 1141 aa14.68□□□□□ -0.06
C2orf88-201ENST00000340623 PLEKHF1Q96S99 279 aa14.68□□□□□ -0.06
C2orf88-201ENST00000340623 USP31Q70CQ4 1352 aa14.68□□□□□ -0.06
C2orf88-201ENST00000340623 HTATSF1O43719 755 aaKnown RBP14.68□□□□□ -0.06
C2orf88-201ENST00000340623 FMNL2Q96PY5 1086 aa14.68□□□□□ -0.06
C2orf88-201ENST00000340623 CDK12Q9NYV4 1490 aaPredicted RBP14.67□□□□□ -0.06
C2orf88-201ENST00000340623 MST1RQ04912 1400 aa14.67□□□□□ -0.06
C2orf88-201ENST00000340623 F6X3S4 739 aa14.67□□□□□ -0.06
C2orf88-201ENST00000340623 DCAF5Q96JK2 942 aa14.66□□□□□ -0.06
C2orf88-201ENST00000340623 RTL1A6NKG5 1358 aa14.66□□□□□ -0.06
C2orf88-201ENST00000340623 PCDH11XQ9BZA7 1347 aa14.66□□□□□ -0.06
C2orf88-201ENST00000340623 PCDH11YQ9BZA8 1340 aa14.66□□□□□ -0.06
C2orf88-201ENST00000340623 TMEM57Q8N5G2 664 aa14.65□□□□□ -0.06
C2orf88-201ENST00000340623 CD163L1Q9NR16 1453 aa14.65□□□□□ -0.06
C2orf88-201ENST00000340623 SLC4A3P48751 1232 aa14.65□□□□□ -0.06
C2orf88-201ENST00000340623 OVOS2A0A0J9YW53 1432 aa14.65□□□□□ -0.06
C2orf88-201ENST00000340623 UBTFL1P0CB47 393 aaPredicted RBP14.65□□□□□ -0.06
C2orf88-201ENST00000340623 OVOS2Q6IE36 1432 aa14.65□□□□□ -0.06
C2orf88-201ENST00000340623 WDR17Q8IZU2 1322 aa14.65□□□□□ -0.06
C2orf88-201ENST00000340623 PIP4K2AP48426 406 aaPredicted RBP14.64□□□□□ -0.07
C2orf88-201ENST00000340623 ANKRD45Q5TZF3 282 aa14.64□□□□□ -0.07
C2orf88-201ENST00000340623 STARD3NLO95772 234 aa14.64□□□□□ -0.07
C2orf88-201ENST00000340623 ALDH1L2Q3SY69 923 aa14.64□□□□□ -0.07
C2orf88-201ENST00000340623 IL17REQ8NFR9 667 aa14.64□□□□□ -0.07
C2orf88-201ENST00000340623 NCOA3Q9Y6Q9 1424 aa14.64□□□□□ -0.07
C2orf88-201ENST00000340623 EIF5BO60841 1220 aaKnown RBP14.63□□□□□ -0.07
C2orf88-201ENST00000340623 KIF6Q6ZMV9 814 aa14.63□□□□□ -0.07
C2orf88-201ENST00000340623 POLR1AO95602 1720 aaPredicted RBP14.63□□□□□ -0.07
C2orf88-201ENST00000340623 KIF24Q5T7B8 1368 aa14.63□□□□□ -0.07
C2orf88-201ENST00000340623 MVPQ14764 893 aaKnown RBP14.63□□□□□ -0.07
C2orf88-201ENST00000340623 SRCIN1Q9C0H9 1055 aa14.63□□□□□ -0.07
C2orf88-201ENST00000340623 TRIM27P14373 513 aa14.63□□□□□ -0.07
C2orf88-201ENST00000340623 CENPQQ7L2Z9 268 aaPredicted RBP14.63□□□□□ -0.07
C2orf88-201ENST00000340623 SPRYD3Q8NCJ5 442 aa14.63□□□□□ -0.07
C2orf88-201ENST00000340623 CARD10Q9BWT7 1032 aa14.63□□□□□ -0.07
C2orf88-201ENST00000340623 DCCP43146 1447 aa14.62□□□□□ -0.07
C2orf88-201ENST00000340623 NRXN3Q9Y4C0 1643 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms