RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 ABCC4O15439 1325 aa29.21■■■□□ 2.27
CLPTM1-201ENST00000337392 SMC5Q8IY18 1101 aa29.21■■■□□ 2.27
CLPTM1-201ENST00000337392 CHD2O14647 1828 aaKnown RBP29.21■■■□□ 2.27
CLPTM1-201ENST00000337392 MARF1Q9Y4F3 1742 aaKnown RBP29.21■■■□□ 2.27
CLPTM1-201ENST00000337392 CRB1P82279 1406 aa29.21■■■□□ 2.27
CLPTM1-201ENST00000337392 ZNF428Q96B54 188 aa29.21■■■□□ 2.27
CLPTM1-201ENST00000337392 G2E3Q7L622 706 aa29.2■■■□□ 2.27
CLPTM1-201ENST00000337392 ANKARQ7Z5J8 1434 aa29.2■■■□□ 2.26
CLPTM1-201ENST00000337392 LRRC59Q96AG4 307 aaKnown RBP29.18■■■□□ 2.26
CLPTM1-201ENST00000337392 F6X3S4 739 aa29.18■■■□□ 2.26
CLPTM1-201ENST00000337392 SLC4A2P04920 1241 aa29.18■■■□□ 2.26
CLPTM1-201ENST00000337392 DDRGK1Q96HY6 314 aa29.18■■■□□ 2.26
CLPTM1-201ENST00000337392 ANKRD45Q5TZF3 282 aa29.17■■■□□ 2.26
CLPTM1-201ENST00000337392 KDRP35968 1356 aa29.17■■■□□ 2.26
CLPTM1-201ENST00000337392 ARHGAP45Q92619 1136 aa29.16■■■□□ 2.26
CLPTM1-201ENST00000337392 DDX17Q92841 729 aaKnown RBP29.16■■■□□ 2.26
CLPTM1-201ENST00000337392 VIRMAQ69YN4 1812 aaKnown RBP29.15■■■□□ 2.26
CLPTM1-201ENST00000337392 NBPF6Q5VWK0 638 aa29.14■■■□□ 2.26
CLPTM1-201ENST00000337392 NBPF4Q96M43 638 aa29.14■■■□□ 2.26
CLPTM1-201ENST00000337392 DAXXQ9UER7 740 aaPredicted RBP29.14■■■□□ 2.26
CLPTM1-201ENST00000337392 ADAMTSL3P82987 1691 aa29.14■■■□□ 2.26
CLPTM1-201ENST00000337392 IL17REQ8NFR9 667 aa29.13■■■□□ 2.25
CLPTM1-201ENST00000337392 MFAP1P55081 439 aaKnown RBP29.13■■■□□ 2.25
CLPTM1-201ENST00000337392 NPHP4O75161 1426 aaPredicted RBP29.13■■■□□ 2.25
CLPTM1-201ENST00000337392 NUCB1Q02818 461 aa29.12■■■□□ 2.25
CLPTM1-201ENST00000337392 SLC4A10Q6U841 1118 aa29.12■■■□□ 2.25
CLPTM1-201ENST00000337392 APBB1O00213 710 aa29.12■■■□□ 2.25
CLPTM1-201ENST00000337392 CHD1LQ86WJ1 897 aa29.11■■■□□ 2.25
CLPTM1-201ENST00000337392 RGS12O14924 1447 aa29.11■■■□□ 2.25
CLPTM1-201ENST00000337392 API5Q9BZZ5 524 aaKnown RBP29.11■■■□□ 2.25
CLPTM1-201ENST00000337392 NWD1Q149M9 1564 aa29.1■■■□□ 2.25
CLPTM1-201ENST00000337392 MEIS3Q99687 375 aa29.09■■■□□ 2.25
CLPTM1-201ENST00000337392 ADGRL3Q9HAR2 1447 aa29.09■■■□□ 2.25
CLPTM1-201ENST00000337392 GAS2L2Q8NHY3 880 aa29.09■■■□□ 2.25
CLPTM1-201ENST00000337392 MSH6P52701 1360 aa29.09■■■□□ 2.25
CLPTM1-201ENST00000337392 GNAT3A8MTJ3 354 aa29.08■■■□□ 2.25
CLPTM1-201ENST00000337392 PROSER2Q86WR7 435 aaPredicted RBP29.08■■■□□ 2.25
CLPTM1-201ENST00000337392 ZNF142P52746 1687 aaPredicted RBP29.06■■■□□ 2.24
CLPTM1-201ENST00000337392 LGR6Q9HBX8 967 aa29.06■■■□□ 2.24
CLPTM1-201ENST00000337392 LTN1O94822 1766 aa29.05■■■□□ 2.24
CLPTM1-201ENST00000337392 SPRYD3Q8NCJ5 442 aa29.05■■■□□ 2.24
CLPTM1-201ENST00000337392 C16orf71Q8IYS4 520 aaPredicted RBP29.04■■■□□ 2.24
CLPTM1-201ENST00000337392 KIAA0232Q92628 1395 aa29.03■■■□□ 2.24
CLPTM1-201ENST00000337392 IP6K1Q92551 441 aa29.03■■■□□ 2.24
CLPTM1-201ENST00000337392 RTL5Q5HYW3 569 aaPredicted RBP29.02■■■□□ 2.24
CLPTM1-201ENST00000337392 TBC1D32Q96NH3 1257 aa29.02■■■□□ 2.24
CLPTM1-201ENST00000337392 GCP02774 474 aa29.02■■■□□ 2.24
CLPTM1-201ENST00000337392 HSPA2P54652 639 aa29.02■■■□□ 2.24
CLPTM1-201ENST00000337392 SLKQ9H2G2 1235 aaPredicted RBP29.02■■■□□ 2.24
CLPTM1-201ENST00000337392 AXIN2Q9Y2T1 843 aa29.02■■■□□ 2.24
CLPTM1-201ENST00000337392 RGPD2P0DJD1 1756 aa29.01■■■□□ 2.24
CLPTM1-201ENST00000337392 INTS3Q68E01 1043 aaKnown RBP29.01■■■□□ 2.23
CLPTM1-201ENST00000337392 OTUD7AQ8TE49 926 aaPredicted RBP29■■■□□ 2.23
CLPTM1-201ENST00000337392 KCNQ3O43525 872 aa29■■■□□ 2.23
CLPTM1-201ENST00000337392 SMARCA5O60264 1052 aaPredicted RBP29■■■□□ 2.23
CLPTM1-201ENST00000337392 DEKP35659 375 aaKnown RBP29■■■□□ 2.23
CLPTM1-201ENST00000337392 ZC3H6P61129 1189 aaKnown RBP28.99■■■□□ 2.23
CLPTM1-201ENST00000337392 MAP3K5Q99683 1374 aa28.99■■■□□ 2.23
CLPTM1-201ENST00000337392 NFAT5O94916 1531 aa28.98■■■□□ 2.23
CLPTM1-201ENST00000337392 UPF2Q9HAU5 1272 aaKnown RBP28.98■■■□□ 2.23
CLPTM1-201ENST00000337392 MPRIPQ6WCQ1 1025 aa28.97■■■□□ 2.23
CLPTM1-201ENST00000337392 EIF2S2P20042 333 aaKnown RBP28.95■■■□□ 2.23
CLPTM1-201ENST00000337392 CEP85Q6P2H3 762 aa28.95■■■□□ 2.23
CLPTM1-201ENST00000337392 KRT28Q7Z3Y7 464 aa28.95■■■□□ 2.23
CLPTM1-201ENST00000337392 ANXA1P04083 346 aa28.95■■■□□ 2.22
CLPTM1-201ENST00000337392 FKBP5Q13451 457 aaPredicted RBP28.95■■■□□ 2.22
CLPTM1-201ENST00000337392 GCC1Q96CN9 775 aa28.95■■■□□ 2.22
CLPTM1-201ENST00000337392 CABLES1Q8TDN4 633 aa28.94■■■□□ 2.22
CLPTM1-201ENST00000337392 ATP10DQ9P241 1426 aa28.94■■■□□ 2.22
CLPTM1-201ENST00000337392 C22orf23Q9BZE7 217 aa28.94■■■□□ 2.22
CLPTM1-201ENST00000337392 NFKBIBQ15653 356 aa28.93■■■□□ 2.22
CLPTM1-201ENST00000337392 PHAXQ9H814 394 aaKnown RBP28.93■■■□□ 2.22
CLPTM1-201ENST00000337392 RTL1A6NKG5 1358 aa28.93■■■□□ 2.22
CLPTM1-201ENST00000337392 FLIIQ13045 1269 aa28.92■■■□□ 2.22
CLPTM1-201ENST00000337392 TAF7Q15545 349 aaPredicted RBP28.92■■■□□ 2.22
CLPTM1-201ENST00000337392 STK31Q9BXU1 1019 aa28.91■■■□□ 2.22
CLPTM1-201ENST00000337392 TBC1D2Q9BYX2 928 aa28.91■■■□□ 2.22
CLPTM1-201ENST00000337392 PTPRCP08575 1304 aa28.91■■■□□ 2.22
CLPTM1-201ENST00000337392 ARHGEF25Q86VW2 580 aa28.9■■■□□ 2.22
CLPTM1-201ENST00000337392 ZNF530Q6P9A1 599 aaPredicted RBP28.9■■■□□ 2.22
CLPTM1-201ENST00000337392 ANKRD24Q8TF21 1146 aa28.9■■■□□ 2.22
CLPTM1-201ENST00000337392 GSPT1P15170 499 aaKnown RBP28.89■■■□□ 2.22
CLPTM1-201ENST00000337392 ANKRD44Q8N8A2 993 aa28.89■■■□□ 2.22
CLPTM1-201ENST00000337392 KCNH5Q8NCM2 988 aa28.89■■■□□ 2.22
CLPTM1-201ENST00000337392 CHMP4BQ9H444 224 aaKnown RBP28.89■■■□□ 2.21
CLPTM1-201ENST00000337392 DCTPP1Q9H773 170 aa28.89■■■□□ 2.21
CLPTM1-201ENST00000337392 KIF24Q5T7B8 1368 aa28.88■■■□□ 2.21
CLPTM1-201ENST00000337392 FRAT2O75474 233 aaPredicted RBP28.88■■■□□ 2.21
CLPTM1-201ENST00000337392 HAP1P54257 671 aaPredicted RBP28.88■■■□□ 2.21
CLPTM1-201ENST00000337392 HDGFL1Q5TGJ6 251 aa28.87■■■□□ 2.21
CLPTM1-201ENST00000337392 PXDNQ92626 1479 aa28.87■■■□□ 2.21
CLPTM1-201ENST00000337392 TMEM94Q12767 1356 aa28.86■■■□□ 2.21
CLPTM1-201ENST00000337392 PRAMEF22A3QJZ6 481 aa28.86■■■□□ 2.21
CLPTM1-201ENST00000337392 TSHZ3Q63HK5 1081 aa28.86■■■□□ 2.21
CLPTM1-201ENST00000337392 PLEKHM2Q8IWE5 1019 aa28.86■■■□□ 2.21
CLPTM1-201ENST00000337392 C19orf44Q9H6X5 657 aa28.86■■■□□ 2.21
CLPTM1-201ENST00000337392 C1orf167Q5SNV9 1468 aa28.85■■■□□ 2.21
CLPTM1-201ENST00000337392 HTATSF1O43719 755 aaKnown RBP28.85■■■□□ 2.21
CLPTM1-201ENST00000337392 CCDC30Q5VVM6 783 aa28.85■■■□□ 2.21
CLPTM1-201ENST00000337392 EXOC6BQ9Y2D4 811 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms