RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 ESF1Q9H501 851 aaKnown RBP24.66■■□□□ 1.54
CDCA4-201ENST00000336219 AK9Q5TCS8 1911 aa24.66■■□□□ 1.54
CDCA4-201ENST00000336219 SKOR2Q2VWA4 1001 aaPredicted RBP24.65■■□□□ 1.54
CDCA4-201ENST00000336219 DCTPP1Q9H773 170 aa24.65■■□□□ 1.54
CDCA4-201ENST00000336219 UBR1Q8IWV7 1749 aa24.65■■□□□ 1.54
CDCA4-201ENST00000336219 OVOS2A0A0J9YW53 1432 aa24.65■■□□□ 1.54
CDCA4-201ENST00000336219 RGS12O14924 1447 aa24.65■■□□□ 1.54
CDCA4-201ENST00000336219 OVOS2Q6IE36 1432 aa24.65■■□□□ 1.54
CDCA4-201ENST00000336219 TTC21BQ7Z4L5 1316 aa24.65■■□□□ 1.54
CDCA4-201ENST00000336219 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.65■■□□□ 1.54
CDCA4-201ENST00000336219 CDC45O75419 566 aa24.65■■□□□ 1.54
CDCA4-201ENST00000336219 NALCNQ8IZF0 1738 aa24.64■■□□□ 1.54
CDCA4-201ENST00000336219 RGPD1P0DJD0 1748 aa24.64■■□□□ 1.53
CDCA4-201ENST00000336219 HAP1P54257 671 aaPredicted RBP24.64■■□□□ 1.53
CDCA4-201ENST00000336219 TNRQ92752 1358 aa24.63■■□□□ 1.53
CDCA4-201ENST00000336219 TMEM2Q9UHN6 1383 aa24.63■■□□□ 1.53
CDCA4-201ENST00000336219 PEAK1Q9H792 1746 aa24.63■■□□□ 1.53
CDCA4-201ENST00000336219 CHL1O00533 1208 aa24.63■■□□□ 1.53
CDCA4-201ENST00000336219 PLEKHM2Q8IWE5 1019 aa24.63■■□□□ 1.53
CDCA4-201ENST00000336219 C16orf71Q8IYS4 520 aaPredicted RBP24.63■■□□□ 1.53
CDCA4-201ENST00000336219 ATP10DQ9P241 1426 aa24.63■■□□□ 1.53
CDCA4-201ENST00000336219 KRT24Q2M2I5 525 aa24.63■■□□□ 1.53
CDCA4-201ENST00000336219 KIAA0232Q92628 1395 aa24.62■■□□□ 1.53
CDCA4-201ENST00000336219 BAG4O95429 457 aaKnown RBP24.62■■□□□ 1.53
CDCA4-201ENST00000336219 ACEP12821 1306 aa24.62■■□□□ 1.53
CDCA4-201ENST00000336219 ADAMTS13Q76LX8 1427 aa24.61■■□□□ 1.53
CDCA4-201ENST00000336219 MCM10Q7L590 875 aa24.61■■□□□ 1.53
CDCA4-201ENST00000336219 ANKRD44Q8N8A2 993 aa24.61■■□□□ 1.53
CDCA4-201ENST00000336219 DDX49Q9Y6V7 483 aaKnown RBP24.61■■□□□ 1.53
CDCA4-201ENST00000336219 USP6P35125 1406 aa24.59■■□□□ 1.53
CDCA4-201ENST00000336219 PKP1Q13835 747 aa24.59■■□□□ 1.53
CDCA4-201ENST00000336219 OTUD7AQ8TE49 926 aaPredicted RBP24.59■■□□□ 1.53
CDCA4-201ENST00000336219 PLEKHG3A1L390 1219 aa24.58■■□□□ 1.53
CDCA4-201ENST00000336219 NASPP49321 788 aaPredicted RBP24.58■■□□□ 1.53
CDCA4-201ENST00000336219 HSP90AA2PQ14568 343 aaPredicted RBP24.58■■□□□ 1.52
CDCA4-201ENST00000336219 HSP90AB2PQ58FF8 381 aa24.58■■□□□ 1.52
CDCA4-201ENST00000336219 TTC22Q5TAA0 569 aa24.58■■□□□ 1.52
CDCA4-201ENST00000336219 MCTP1Q6DN14 999 aa24.58■■□□□ 1.52
CDCA4-201ENST00000336219 RPAP2Q8IXW5 612 aaPredicted RBP24.58■■□□□ 1.52
CDCA4-201ENST00000336219 MSH6P52701 1360 aa24.57■■□□□ 1.52
CDCA4-201ENST00000336219 PTPRCP08575 1304 aa24.57■■□□□ 1.52
CDCA4-201ENST00000336219 CEP85Q6P2H3 762 aa24.57■■□□□ 1.52
CDCA4-201ENST00000336219 USP31Q70CQ4 1352 aa24.56■■□□□ 1.52
CDCA4-201ENST00000336219 GOLGA6L22H0YM25 854 aa24.56■■□□□ 1.52
CDCA4-201ENST00000336219 APBB1O00213 710 aa24.56■■□□□ 1.52
CDCA4-201ENST00000336219 NCLP19338 710 aaKnown RBP24.55■■□□□ 1.52
CDCA4-201ENST00000336219 PTMSP20962 102 aa24.55■■□□□ 1.52
CDCA4-201ENST00000336219 CRB1P82279 1406 aa24.55■■□□□ 1.52
CDCA4-201ENST00000336219 RTL1A6NKG5 1358 aa24.55■■□□□ 1.52
CDCA4-201ENST00000336219 NUTM2FA1L443 756 aa24.55■■□□□ 1.52
CDCA4-201ENST00000336219 KLHL40Q2TBA0 621 aa24.55■■□□□ 1.52
CDCA4-201ENST00000336219 FMN2Q9NZ56 1722 aa24.54■■□□□ 1.52
CDCA4-201ENST00000336219 SMARCA5O60264 1052 aaPredicted RBP24.53■■□□□ 1.52
CDCA4-201ENST00000336219 CCDC173Q0VFZ6 552 aa24.53■■□□□ 1.52
CDCA4-201ENST00000336219 KIF13AQ9H1H9 1805 aa24.52■■□□□ 1.52
CDCA4-201ENST00000336219 CAVIN1Q6NZI2 390 aaKnown RBP24.52■■□□□ 1.52
CDCA4-201ENST00000336219 CLEC17AQ6ZS10 378 aa24.52■■□□□ 1.52
CDCA4-201ENST00000336219 CHAMP1Q96JM3 812 aa24.52■■□□□ 1.52
CDCA4-201ENST00000336219 SSH2Q76I76 1423 aa24.52■■□□□ 1.52
CDCA4-201ENST00000336219 PLEKHG1Q9ULL1 1385 aa24.52■■□□□ 1.52
CDCA4-201ENST00000336219 RABEP1Q15276 862 aa24.52■■□□□ 1.52
CDCA4-201ENST00000336219 MEIS3Q99687 375 aa24.52■■□□□ 1.52
CDCA4-201ENST00000336219 USP26Q9BXU7 913 aa24.52■■□□□ 1.52
CDCA4-201ENST00000336219 ARHGEF10O15013 1369 aa24.51■■□□□ 1.51
CDCA4-201ENST00000336219 ZGPATQ8N5A5 531 aaKnown RBP24.51■■□□□ 1.51
CDCA4-201ENST00000336219 PPP1R9BQ96SB3 815 aa24.51■■□□□ 1.51
CDCA4-201ENST00000336219 RIMS1Q86UR5 1692 aaKnown RBP24.5■■□□□ 1.51
CDCA4-201ENST00000336219 SLC4A2P04920 1241 aa24.49■■□□□ 1.51
CDCA4-201ENST00000336219 LTKP29376 864 aa24.49■■□□□ 1.51
CDCA4-201ENST00000336219 MAP3K19Q56UN5 1328 aa24.49■■□□□ 1.51
CDCA4-201ENST00000336219 RRP9O43818 475 aaKnown RBP24.49■■□□□ 1.51
CDCA4-201ENST00000336219 LMBRD1Q9NUN5 540 aa24.49■■□□□ 1.51
CDCA4-201ENST00000336219 SOX12O15370 315 aa24.48■■□□□ 1.51
CDCA4-201ENST00000336219 SDSP20132 328 aa24.47■■□□□ 1.51
CDCA4-201ENST00000336219 ZSCAN23Q3MJ62 389 aa24.47■■□□□ 1.51
CDCA4-201ENST00000336219 RBM27Q9P2N5 1060 aaKnown RBP24.47■■□□□ 1.51
CDCA4-201ENST00000336219 PTPRUQ92729 1446 aa24.47■■□□□ 1.51
CDCA4-201ENST00000336219 CYP2E1P05181 493 aaPredicted RBP24.46■■□□□ 1.51
CDCA4-201ENST00000336219 MIS18AQ9NYP9 233 aa24.46■■□□□ 1.51
CDCA4-201ENST00000336219 FOXO3O43524 673 aa24.46■■□□□ 1.51
CDCA4-201ENST00000336219 MTHFSDQ2M296 383 aaKnown RBP24.46■■□□□ 1.51
CDCA4-201ENST00000336219 TTC21AQ8NDW8 1320 aa24.46■■□□□ 1.51
CDCA4-201ENST00000336219 KIAA1211Q6ZU35 1233 aa24.45■■□□□ 1.5
CDCA4-201ENST00000336219 ZSCAN30Q86W11 494 aa24.45■■□□□ 1.5
CDCA4-201ENST00000336219 RBSNQ9H1K0 784 aa24.45■■□□□ 1.5
CDCA4-201ENST00000336219 KDRP35968 1356 aa24.45■■□□□ 1.5
CDCA4-201ENST00000336219 VSIG10Q8N0Z9 540 aa24.44■■□□□ 1.5
CDCA4-201ENST00000336219 SBNO1A3KN83 1393 aa24.44■■□□□ 1.5
CDCA4-201ENST00000336219 FLT4P35916 1363 aa24.44■■□□□ 1.5
CDCA4-201ENST00000336219 TSPYL4Q9UJ04 414 aa24.44■■□□□ 1.5
CDCA4-201ENST00000336219 PRPF40AO75400 957 aaKnown RBP24.43■■□□□ 1.5
CDCA4-201ENST00000336219 NUCB2P80303 420 aa24.43■■□□□ 1.5
CDCA4-201ENST00000336219 FOXD4L5Q5VV16 416 aaPredicted RBP24.43■■□□□ 1.5
CDCA4-201ENST00000336219 FOXD4L4Q8WXT5 416 aaPredicted RBP24.43■■□□□ 1.5
CDCA4-201ENST00000336219 RTF1Q92541 710 aaKnown RBP24.43■■□□□ 1.5
CDCA4-201ENST00000336219 ANP32BQ92688 251 aaKnown RBP24.43■■□□□ 1.5
CDCA4-201ENST00000336219 IBTKQ9P2D0 1353 aaPredicted RBP24.43■■□□□ 1.5
CDCA4-201ENST00000336219 ZNF445P59923 1031 aa24.43■■□□□ 1.5
CDCA4-201ENST00000336219 G2E3Q7L622 706 aa24.43■■□□□ 1.5
CDCA4-201ENST00000336219 CASC1Q6TDU7 716 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms