RNA–Protein interactions for RNA: ENST00000335005.10

ITM2C-203, Transcript of integral membrane protein 2C, humanhuman

TSL 1 (best) BASIC

Gene ITM2C, Length 1,889 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-203ENST00000335005 AMPHP49418 695 aa29.51■■■□□ 2.31
ITM2C-203ENST00000335005 SOX12O15370 315 aa29.5■■■□□ 2.31
ITM2C-203ENST00000335005 NLRP6P59044 892 aa29.49■■■□□ 2.31
ITM2C-203ENST00000335005 EYA1Q99502 592 aa29.49■■■□□ 2.31
ITM2C-203ENST00000335005 RTL1A6NKG5 1358 aa29.49■■■□□ 2.31
ITM2C-203ENST00000335005 MTHFSDQ2M296 383 aaKnown RBP29.48■■■□□ 2.31
ITM2C-203ENST00000335005 GAS2L2Q8NHY3 880 aa29.48■■■□□ 2.31
ITM2C-203ENST00000335005 PTPRCP08575 1304 aa29.48■■■□□ 2.31
ITM2C-203ENST00000335005 HTATSF1O43719 755 aaKnown RBP29.48■■■□□ 2.31
ITM2C-203ENST00000335005 LTN1O94822 1766 aa29.48■■■□□ 2.31
ITM2C-203ENST00000335005 ANKLE2Q86XL3 938 aa29.47■■■□□ 2.31
ITM2C-203ENST00000335005 SIRT2Q8IXJ6 389 aa29.47■■■□□ 2.31
ITM2C-203ENST00000335005 TRHP20396 242 aaPredicted RBP29.46■■■□□ 2.31
ITM2C-203ENST00000335005 HOXC9P31274 260 aa29.45■■■□□ 2.31
ITM2C-203ENST00000335005 NFKBIBQ15653 356 aa29.45■■■□□ 2.31
ITM2C-203ENST00000335005 LNPKQ9C0E8 428 aa29.45■■■□□ 2.31
ITM2C-203ENST00000335005 PHRF1Q9P1Y6 1649 aaKnown RBP29.45■■■□□ 2.3
ITM2C-203ENST00000335005 KRT24Q2M2I5 525 aa29.44■■■□□ 2.3
ITM2C-203ENST00000335005 ADGRL3Q9HAR2 1447 aa29.44■■■□□ 2.3
ITM2C-203ENST00000335005 CACNA1FO60840 1977 aa29.44■■■□□ 2.3
ITM2C-203ENST00000335005 RTF1Q92541 710 aaKnown RBP29.44■■■□□ 2.3
ITM2C-203ENST00000335005 C1orf115Q9H7X2 142 aa29.44■■■□□ 2.3
ITM2C-203ENST00000335005 BMP2KLQ5H9B9 411 aa29.43■■■□□ 2.3
ITM2C-203ENST00000335005 NFAT5O94916 1531 aa29.42■■■□□ 2.3
ITM2C-203ENST00000335005 ATP10DQ9P241 1426 aa29.42■■■□□ 2.3
ITM2C-203ENST00000335005 FOXO3O43524 673 aa29.42■■■□□ 2.3
ITM2C-203ENST00000335005 FAM208AQ9UK61 1670 aaKnown RBP29.41■■■□□ 2.3
ITM2C-203ENST00000335005 PHF8Q9UPP1 1060 aa29.41■■■□□ 2.3
ITM2C-203ENST00000335005 ABTB2Q8N961 1025 aa29.39■■■□□ 2.3
ITM2C-203ENST00000335005 C22orf23Q9BZE7 217 aa29.39■■■□□ 2.3
ITM2C-203ENST00000335005 ANKRD45Q5TZF3 282 aa29.38■■■□□ 2.29
ITM2C-203ENST00000335005 TSPYL4Q9UJ04 414 aa29.38■■■□□ 2.29
ITM2C-203ENST00000335005 N4BP2Q86UW6 1770 aaPredicted RBP29.38■■■□□ 2.29
ITM2C-203ENST00000335005 SOS1Q07889 1333 aaPredicted RBP29.36■■■□□ 2.29
ITM2C-203ENST00000335005 ANKRD44Q8N8A2 993 aa29.36■■■□□ 2.29
ITM2C-203ENST00000335005 TBC1D2Q9BYX2 928 aa29.35■■■□□ 2.29
ITM2C-203ENST00000335005 DCTPP1Q9H773 170 aa29.35■■■□□ 2.29
ITM2C-203ENST00000335005 BABAM1Q9NWV8 329 aa29.35■■■□□ 2.29
ITM2C-203ENST00000335005 MSH6P52701 1360 aa29.35■■■□□ 2.29
ITM2C-203ENST00000335005 MFAP1P55081 439 aaKnown RBP29.34■■■□□ 2.29
ITM2C-203ENST00000335005 MAP3K5Q99683 1374 aa29.34■■■□□ 2.29
ITM2C-203ENST00000335005 RPAP2Q8IXW5 612 aaPredicted RBP29.34■■■□□ 2.29
ITM2C-203ENST00000335005 GNAT3A8MTJ3 354 aa29.33■■■□□ 2.29
ITM2C-203ENST00000335005 RBM25P49756 843 aaKnown RBP29.31■■■□□ 2.28
ITM2C-203ENST00000335005 ANTXR1Q9H6X2 564 aa29.31■■■□□ 2.28
ITM2C-203ENST00000335005 NPHP4O75161 1426 aaPredicted RBP29.31■■■□□ 2.28
ITM2C-203ENST00000335005 SLC4A2P04920 1241 aa29.31■■■□□ 2.28
ITM2C-203ENST00000335005 NUTM2GQ5VZR2 741 aa29.31■■■□□ 2.28
ITM2C-203ENST00000335005 MIS18AQ9NYP9 233 aa29.29■■■□□ 2.28
ITM2C-203ENST00000335005 MED1Q15648 1581 aaPredicted RBP29.29■■■□□ 2.28
ITM2C-203ENST00000335005 CEP85Q6P2H3 762 aa29.29■■■□□ 2.28
ITM2C-203ENST00000335005 IP6K1Q92551 441 aa29.29■■■□□ 2.28
ITM2C-203ENST00000335005 SLIT3O75094 1523 aa29.26■■■□□ 2.27
ITM2C-203ENST00000335005 CCT4P50991 539 aaKnown RBP29.26■■■□□ 2.27
ITM2C-203ENST00000335005 LMO7Q8WWI1 1683 aa29.25■■■□□ 2.27
ITM2C-203ENST00000335005 KCNH5Q8NCM2 988 aa29.24■■■□□ 2.27
ITM2C-203ENST00000335005 IL17REQ8NFR9 667 aa29.24■■■□□ 2.27
ITM2C-203ENST00000335005 MEIS3Q99687 375 aa29.24■■■□□ 2.27
ITM2C-203ENST00000335005 G2E3Q7L622 706 aa29.23■■■□□ 2.27
ITM2C-203ENST00000335005 KDM3BQ7LBC6 1761 aa29.23■■■□□ 2.27
ITM2C-203ENST00000335005 TRPM3Q9HCF6 1732 aaPredicted RBP29.23■■■□□ 2.27
ITM2C-203ENST00000335005 PLEKHM2Q8IWE5 1019 aa29.23■■■□□ 2.27
ITM2C-203ENST00000335005 CEMIPQ8WUJ3 1361 aa29.23■■■□□ 2.27
ITM2C-203ENST00000335005 PXDNLA1KZ92 1463 aa29.23■■■□□ 2.27
ITM2C-203ENST00000335005 RGPD2P0DJD1 1756 aa29.22■■■□□ 2.27
ITM2C-203ENST00000335005 NCAPD2Q15021 1401 aa29.22■■■□□ 2.27
ITM2C-203ENST00000335005 FRAT2O75474 233 aaPredicted RBP29.22■■■□□ 2.27
ITM2C-203ENST00000335005 CCDC30Q5VVM6 783 aa29.22■■■□□ 2.27
ITM2C-203ENST00000335005 STK31Q9BXU1 1019 aa29.22■■■□□ 2.27
ITM2C-203ENST00000335005 TAF7Q15545 349 aaPredicted RBP29.21■■■□□ 2.27
ITM2C-203ENST00000335005 KIF1AQ12756 1690 aa29.2■■■□□ 2.27
ITM2C-203ENST00000335005 CAMTA1Q9Y6Y1 1673 aa29.2■■■□□ 2.27
ITM2C-203ENST00000335005 EIF5BO60841 1220 aaKnown RBP29.2■■■□□ 2.26
ITM2C-203ENST00000335005 TBC1D9Q6ZT07 1266 aa29.2■■■□□ 2.26
ITM2C-203ENST00000335005 C14orf37Q86TY3 774 aa29.2■■■□□ 2.26
ITM2C-203ENST00000335005 PSME1Q06323 249 aa29.19■■■□□ 2.26
ITM2C-203ENST00000335005 ESCO1Q5FWF5 840 aa29.19■■■□□ 2.26
ITM2C-203ENST00000335005 SNX21Q969T3 373 aa29.19■■■□□ 2.26
ITM2C-203ENST00000335005 CDC45O75419 566 aa29.18■■■□□ 2.26
ITM2C-203ENST00000335005 LTV1Q96GA3 475 aaPredicted RBP29.18■■■□□ 2.26
ITM2C-203ENST00000335005 SLKQ9H2G2 1235 aaPredicted RBP29.18■■■□□ 2.26
ITM2C-203ENST00000335005 NCOA3Q9Y6Q9 1424 aa29.17■■■□□ 2.26
ITM2C-203ENST00000335005 HMMRO75330 724 aa29.17■■■□□ 2.26
ITM2C-203ENST00000335005 GSPT1P15170 499 aaKnown RBP29.17■■■□□ 2.26
ITM2C-203ENST00000335005 FLIIQ13045 1269 aa29.16■■■□□ 2.26
ITM2C-203ENST00000335005 TTC22Q5TAA0 569 aa29.16■■■□□ 2.26
ITM2C-203ENST00000335005 MST1RQ04912 1400 aa29.16■■■□□ 2.26
ITM2C-203ENST00000335005 GSE1Q14687 1217 aa29.15■■■□□ 2.26
ITM2C-203ENST00000335005 F6X3S4 739 aa29.14■■■□□ 2.26
ITM2C-203ENST00000335005 RBM33Q96EV2 1170 aaKnown RBP29.14■■■□□ 2.26
ITM2C-203ENST00000335005 NBPF6Q5VWK0 638 aa29.13■■■□□ 2.25
ITM2C-203ENST00000335005 HSCBQ8IWL3 235 aa29.13■■■□□ 2.25
ITM2C-203ENST00000335005 NBPF4Q96M43 638 aa29.13■■■□□ 2.25
ITM2C-203ENST00000335005 USHBP1Q8N6Y0 703 aa29.12■■■□□ 2.25
ITM2C-203ENST00000335005 LMTK3Q96Q04 1460 aa29.11■■■□□ 2.25
ITM2C-203ENST00000335005 OVOS2A0A0G2JMS6 1433 aa29.11■■■□□ 2.25
ITM2C-203ENST00000335005 KIF2CQ99661 725 aa29.11■■■□□ 2.25
ITM2C-203ENST00000335005 SLC4A10Q6U841 1118 aa29.1■■■□□ 2.25
ITM2C-203ENST00000335005 TUBGCP6Q96RT7 1819 aa29.1■■■□□ 2.25
ITM2C-203ENST00000335005 GNAI2P04899 355 aa29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms