RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 ZRANB1Q9UGI0 708 aa25.49■■□□□ 1.67
SPNS1-203ENST00000334536 CHD1LQ86WJ1 897 aa25.48■■□□□ 1.67
SPNS1-203ENST00000334536 ABCC4O15439 1325 aa25.48■■□□□ 1.67
SPNS1-203ENST00000334536 GTF2E1P29083 439 aaPredicted RBP25.47■■□□□ 1.67
SPNS1-203ENST00000334536 THUMPD2Q9BTF0 503 aaKnown RBP25.47■■□□□ 1.67
SPNS1-203ENST00000334536 KIF24Q5T7B8 1368 aa25.47■■□□□ 1.67
SPNS1-203ENST00000334536 NRKQ7Z2Y5 1582 aa25.46■■□□□ 1.67
SPNS1-203ENST00000334536 UQCRHLA0A096LP55 91 aa25.46■■□□□ 1.67
SPNS1-203ENST00000334536 UQCRHP07919 91 aa25.46■■□□□ 1.67
SPNS1-203ENST00000334536 MCM5P33992 734 aa25.46■■□□□ 1.67
SPNS1-203ENST00000334536 GBP4Q96PP9 640 aa25.46■■□□□ 1.67
SPNS1-203ENST00000334536 API5Q9BZZ5 524 aaKnown RBP25.46■■□□□ 1.67
SPNS1-203ENST00000334536 TMEM2Q9UHN6 1383 aa25.46■■□□□ 1.67
SPNS1-203ENST00000334536 MFAP1P55081 439 aaKnown RBP25.46■■□□□ 1.67
SPNS1-203ENST00000334536 TWISTNBQ3B726 338 aaPredicted RBP25.46■■□□□ 1.67
SPNS1-203ENST00000334536 TSPYL6Q8N831 410 aa25.46■■□□□ 1.67
SPNS1-203ENST00000334536 TAF3Q5VWG9 929 aa25.45■■□□□ 1.66
SPNS1-203ENST00000334536 BCL11BQ9C0K0 894 aaPredicted RBP25.45■■□□□ 1.66
SPNS1-203ENST00000334536 LETM1O95202 739 aaPredicted RBP25.44■■□□□ 1.66
SPNS1-203ENST00000334536 GAS2L3Q86XJ1 694 aa25.44■■□□□ 1.66
SPNS1-203ENST00000334536 NOL7Q9UMY1 257 aaKnown RBP25.44■■□□□ 1.66
SPNS1-203ENST00000334536 PRR36Q9H6K5 1346 aa25.43■■□□□ 1.66
SPNS1-203ENST00000334536 ZSCAN20P17040 1043 aaPredicted RBP25.43■■□□□ 1.66
SPNS1-203ENST00000334536 DDIT3P35638 169 aa25.43■■□□□ 1.66
SPNS1-203ENST00000334536 NASPP49321 788 aaPredicted RBP25.43■■□□□ 1.66
SPNS1-203ENST00000334536 TAF7LQ5H9L4 462 aa25.43■■□□□ 1.66
SPNS1-203ENST00000334536 R3HCC1Q9Y3T6 440 aaKnown RBP25.43■■□□□ 1.66
SPNS1-203ENST00000334536 DLG5Q8TDM6 1919 aa25.43■■□□□ 1.66
SPNS1-203ENST00000334536 RRS1Q15050 365 aaKnown RBP25.42■■□□□ 1.66
SPNS1-203ENST00000334536 BMP2KLQ5H9B9 411 aa25.42■■□□□ 1.66
SPNS1-203ENST00000334536 ZHX1Q9UKY1 873 aaPredicted RBP25.42■■□□□ 1.66
SPNS1-203ENST00000334536 HAP1P54257 671 aaPredicted RBP25.42■■□□□ 1.66
SPNS1-203ENST00000334536 LNPKQ9C0E8 428 aa25.42■■□□□ 1.66
SPNS1-203ENST00000334536 UBR1Q8IWV7 1749 aa25.41■■□□□ 1.66
SPNS1-203ENST00000334536 IPO4Q8TEX9 1081 aaKnown RBP25.41■■□□□ 1.66
SPNS1-203ENST00000334536 NCKAP5LQ9HCH0 1330 aa25.41■■□□□ 1.66
SPNS1-203ENST00000334536 RBM25P49756 843 aaKnown RBP25.41■■□□□ 1.66
SPNS1-203ENST00000334536 ROBO2Q9HCK4 1378 aa25.4■■□□□ 1.66
SPNS1-203ENST00000334536 PLEKHG3A1L390 1219 aa25.4■■□□□ 1.66
SPNS1-203ENST00000334536 TTC21BQ7Z4L5 1316 aa25.4■■□□□ 1.66
SPNS1-203ENST00000334536 ADAMTS13Q76LX8 1427 aa25.4■■□□□ 1.66
SPNS1-203ENST00000334536 FER1L4A9Z1Z3 1794 aa25.39■■□□□ 1.66
SPNS1-203ENST00000334536 SASS6Q6UVJ0 657 aa25.39■■□□□ 1.66
SPNS1-203ENST00000334536 C8orf58Q8NAV2 365 aa25.39■■□□□ 1.66
SPNS1-203ENST00000334536 NAP1L2Q9ULW6 460 aaPredicted RBP25.39■■□□□ 1.66
SPNS1-203ENST00000334536 PPP4R3BQ5MIZ7 849 aa25.38■■□□□ 1.65
SPNS1-203ENST00000334536 PLEKHG1Q9ULL1 1385 aa25.38■■□□□ 1.65
SPNS1-203ENST00000334536 TOPAZ1Q8N9V7 1692 aa25.38■■□□□ 1.65
SPNS1-203ENST00000334536 ANKRD45Q5TZF3 282 aa25.37■■□□□ 1.65
SPNS1-203ENST00000334536 OVOS2A0A0J9YW53 1432 aa25.37■■□□□ 1.65
SPNS1-203ENST00000334536 OVOS2Q6IE36 1432 aa25.37■■□□□ 1.65
SPNS1-203ENST00000334536 HSCBQ8IWL3 235 aa25.37■■□□□ 1.65
SPNS1-203ENST00000334536 EIF4A2Q14240 407 aaKnown RBP25.36■■□□□ 1.65
SPNS1-203ENST00000334536 ELL2O00472 640 aaPredicted RBP25.36■■□□□ 1.65
SPNS1-203ENST00000334536 SNX21Q969T3 373 aa25.36■■□□□ 1.65
SPNS1-203ENST00000334536 CEBPAP49715 358 aaPredicted RBP25.34■■□□□ 1.65
SPNS1-203ENST00000334536 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.34■■□□□ 1.65
SPNS1-203ENST00000334536 USP31Q70CQ4 1352 aa25.33■■□□□ 1.65
SPNS1-203ENST00000334536 KIAA0232Q92628 1395 aa25.33■■□□□ 1.65
SPNS1-203ENST00000334536 ACEP12821 1306 aa25.33■■□□□ 1.65
SPNS1-203ENST00000334536 FAM83GA6ND36 823 aa25.33■■□□□ 1.65
SPNS1-203ENST00000334536 SIRT2Q8IXJ6 389 aa25.33■■□□□ 1.65
SPNS1-203ENST00000334536 USP6P35125 1406 aa25.33■■□□□ 1.65
SPNS1-203ENST00000334536 CHL1O00533 1208 aa25.32■■□□□ 1.64
SPNS1-203ENST00000334536 INTS3Q68E01 1043 aaKnown RBP25.32■■□□□ 1.64
SPNS1-203ENST00000334536 SULT6B1Q6IMI4 303 aa25.32■■□□□ 1.64
SPNS1-203ENST00000334536 NALCNQ8IZF0 1738 aa25.32■■□□□ 1.64
SPNS1-203ENST00000334536 RAB3GAP1Q15042 981 aa25.31■■□□□ 1.64
SPNS1-203ENST00000334536 PDLIM2Q96JY6 352 aa25.31■■□□□ 1.64
SPNS1-203ENST00000334536 C1orf115Q9H7X2 142 aa25.31■■□□□ 1.64
SPNS1-203ENST00000334536 DCTN1Q14203 1278 aa25.29■■□□□ 1.64
SPNS1-203ENST00000334536 TNPO1Q92973 898 aaKnown RBP25.29■■□□□ 1.64
SPNS1-203ENST00000334536 CLEC17AQ6ZS10 378 aa25.29■■□□□ 1.64
SPNS1-203ENST00000334536 ZKSCAN5Q9Y2L8 839 aa25.29■■□□□ 1.64
SPNS1-203ENST00000334536 RGPD1P0DJD0 1748 aa25.28■■□□□ 1.64
SPNS1-203ENST00000334536 PLPPR3Q6T4P5 718 aa25.28■■□□□ 1.64
SPNS1-203ENST00000334536 AEBP1Q8IUX7 1158 aa25.28■■□□□ 1.64
SPNS1-203ENST00000334536 SSH2Q76I76 1423 aa25.28■■□□□ 1.64
SPNS1-203ENST00000334536 ZNF445P59923 1031 aa25.27■■□□□ 1.64
SPNS1-203ENST00000334536 TTC21AQ8NDW8 1320 aa25.27■■□□□ 1.64
SPNS1-203ENST00000334536 DCTPP1Q9H773 170 aa25.27■■□□□ 1.64
SPNS1-203ENST00000334536 PRDM10Q9NQV6 1147 aa25.27■■□□□ 1.64
SPNS1-203ENST00000334536 KLHL40Q2TBA0 621 aa25.26■■□□□ 1.63
SPNS1-203ENST00000334536 PTPRCP08575 1304 aa25.26■■□□□ 1.63
SPNS1-203ENST00000334536 ARHGEF10O15013 1369 aa25.26■■□□□ 1.63
SPNS1-203ENST00000334536 GOLGA6L22H0YM25 854 aa25.25■■□□□ 1.63
SPNS1-203ENST00000334536 LTKP29376 864 aa25.25■■□□□ 1.63
SPNS1-203ENST00000334536 PEAK1Q9H792 1746 aa25.25■■□□□ 1.63
SPNS1-203ENST00000334536 RPAP2Q8IXW5 612 aaPredicted RBP25.24■■□□□ 1.63
SPNS1-203ENST00000334536 SPRYD3Q8NCJ5 442 aa25.24■■□□□ 1.63
SPNS1-203ENST00000334536 TBC1D9Q6ZT07 1266 aa25.23■■□□□ 1.63
SPNS1-203ENST00000334536 ANKRD44Q8N8A2 993 aa25.23■■□□□ 1.63
SPNS1-203ENST00000334536 TMEM51Q9NW97 253 aa25.23■■□□□ 1.63
SPNS1-203ENST00000334536 RGS12O14924 1447 aa25.23■■□□□ 1.63
SPNS1-203ENST00000334536 CDC45O75419 566 aa25.22■■□□□ 1.63
SPNS1-203ENST00000334536 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.22■■□□□ 1.63
SPNS1-203ENST00000334536 EID1Q9Y6B2 187 aa25.22■■□□□ 1.63
SPNS1-203ENST00000334536 PTPRUQ92729 1446 aa25.22■■□□□ 1.63
SPNS1-203ENST00000334536 CRB1P82279 1406 aa25.22■■□□□ 1.63
SPNS1-203ENST00000334536 HSP90AB1P08238 724 aaKnown RBP25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms