RNA–Protein interactions for RNA: ENST00000332728.8

LYSMD4-201, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-201ENST00000332728 PHF8Q9UPP1 1060 aa22.83■■□□□ 1.25
LYSMD4-201ENST00000332728 OTUD7AQ8TE49 926 aaPredicted RBP22.83■■□□□ 1.24
LYSMD4-201ENST00000332728 DIP2AQ14689 1571 aa22.83■■□□□ 1.24
LYSMD4-201ENST00000332728 TBC1D32Q96NH3 1257 aa22.82■■□□□ 1.24
LYSMD4-201ENST00000332728 CEP170BQ9Y4F5 1589 aaPredicted RBP22.81■■□□□ 1.24
LYSMD4-201ENST00000332728 DDX17Q92841 729 aaKnown RBP22.81■■□□□ 1.24
LYSMD4-201ENST00000332728 C22orf23Q9BZE7 217 aa22.81■■□□□ 1.24
LYSMD4-201ENST00000332728 FLT4P35916 1363 aa22.81■■□□□ 1.24
LYSMD4-201ENST00000332728 ABCC4O15439 1325 aa22.8■■□□□ 1.24
LYSMD4-201ENST00000332728 TBC1D2Q9BYX2 928 aa22.8■■□□□ 1.24
LYSMD4-201ENST00000332728 API5Q9BZZ5 524 aaKnown RBP22.8■■□□□ 1.24
LYSMD4-201ENST00000332728 FOXD4L1Q9NU39 408 aa22.79■■□□□ 1.24
LYSMD4-201ENST00000332728 TTC21AQ8NDW8 1320 aa22.79■■□□□ 1.24
LYSMD4-201ENST00000332728 SSH2Q76I76 1423 aa22.78■■□□□ 1.24
LYSMD4-201ENST00000332728 ARXQ96QS3 562 aa22.78■■□□□ 1.24
LYSMD4-201ENST00000332728 USP31Q70CQ4 1352 aa22.78■■□□□ 1.24
LYSMD4-201ENST00000332728 SBNO1A3KN83 1393 aa22.78■■□□□ 1.24
LYSMD4-201ENST00000332728 MSH6P52701 1360 aa22.78■■□□□ 1.24
LYSMD4-201ENST00000332728 EIF2S2P20042 333 aaKnown RBP22.77■■□□□ 1.24
LYSMD4-201ENST00000332728 ARHGAP23Q9P227 1491 aa22.77■■□□□ 1.24
LYSMD4-201ENST00000332728 ANXA1P04083 346 aa22.77■■□□□ 1.23
LYSMD4-201ENST00000332728 TSHZ3Q63HK5 1081 aa22.77■■□□□ 1.23
LYSMD4-201ENST00000332728 IL17REQ8NFR9 667 aa22.76■■□□□ 1.23
LYSMD4-201ENST00000332728 ARHGAP45Q92619 1136 aa22.76■■□□□ 1.23
LYSMD4-201ENST00000332728 NBPF6Q5VWK0 638 aa22.75■■□□□ 1.23
LYSMD4-201ENST00000332728 NBPF4Q96M43 638 aa22.75■■□□□ 1.23
LYSMD4-201ENST00000332728 SLIT1O75093 1534 aa22.75■■□□□ 1.23
LYSMD4-201ENST00000332728 PTCH1Q13635 1447 aa22.75■■□□□ 1.23
LYSMD4-201ENST00000332728 PIK3R4Q99570 1358 aa22.75■■□□□ 1.23
LYSMD4-201ENST00000332728 NRKQ7Z2Y5 1582 aa22.74■■□□□ 1.23
LYSMD4-201ENST00000332728 BECN1Q14457 450 aa22.74■■□□□ 1.23
LYSMD4-201ENST00000332728 LGR6Q9HBX8 967 aa22.74■■□□□ 1.23
LYSMD4-201ENST00000332728 FKBP5Q13451 457 aaPredicted RBP22.74■■□□□ 1.23
LYSMD4-201ENST00000332728 CRB1P82279 1406 aa22.73■■□□□ 1.23
LYSMD4-201ENST00000332728 IGSF1Q8N6C5 1336 aa22.73■■□□□ 1.23
LYSMD4-201ENST00000332728 GNAT3A8MTJ3 354 aa22.72■■□□□ 1.23
LYSMD4-201ENST00000332728 KCNQ3O43525 872 aa22.72■■□□□ 1.23
LYSMD4-201ENST00000332728 RBM42Q9BTD8 480 aaKnown RBP22.72■■□□□ 1.23
LYSMD4-201ENST00000332728 TOPAZ1Q8N9V7 1692 aa22.72■■□□□ 1.23
LYSMD4-201ENST00000332728 BRPF1P55201 1214 aaPredicted RBP22.72■■□□□ 1.23
LYSMD4-201ENST00000332728 MPRIPQ6WCQ1 1025 aa22.71■■□□□ 1.23
LYSMD4-201ENST00000332728 GAS2L2Q8NHY3 880 aa22.71■■□□□ 1.23
LYSMD4-201ENST00000332728 ZC3H6P61129 1189 aaKnown RBP22.7■■□□□ 1.22
LYSMD4-201ENST00000332728 PIK3C2AO00443 1686 aa22.7■■□□□ 1.22
LYSMD4-201ENST00000332728 EXOC6BQ9Y2D4 811 aa22.7■■□□□ 1.22
LYSMD4-201ENST00000332728 ARHGEF10O15013 1369 aa22.69■■□□□ 1.22
LYSMD4-201ENST00000332728 PHAXQ9H814 394 aaKnown RBP22.69■■□□□ 1.22
LYSMD4-201ENST00000332728 CEP85Q6P2H3 762 aa22.68■■□□□ 1.22
LYSMD4-201ENST00000332728 TBC1D9Q6ZT07 1266 aa22.68■■□□□ 1.22
LYSMD4-201ENST00000332728 GCC1Q96CN9 775 aa22.68■■□□□ 1.22
LYSMD4-201ENST00000332728 STK31Q9BXU1 1019 aa22.68■■□□□ 1.22
LYSMD4-201ENST00000332728 GSPT1P15170 499 aaKnown RBP22.68■■□□□ 1.22
LYSMD4-201ENST00000332728 RGS12O14924 1447 aa22.67■■□□□ 1.22
LYSMD4-201ENST00000332728 INTS3Q68E01 1043 aaKnown RBP22.67■■□□□ 1.22
LYSMD4-201ENST00000332728 PROSER2Q86WR7 435 aaPredicted RBP22.67■■□□□ 1.22
LYSMD4-201ENST00000332728 RTN4Q9NQC3 1192 aaKnown RBP22.66■■□□□ 1.22
LYSMD4-201ENST00000332728 VIRMAQ69YN4 1812 aaKnown RBP22.65■■□□□ 1.22
LYSMD4-201ENST00000332728 FLIIQ13045 1269 aa22.65■■□□□ 1.22
LYSMD4-201ENST00000332728 CABLES1Q8TDN4 633 aa22.65■■□□□ 1.22
LYSMD4-201ENST00000332728 PLEKHM2Q8IWE5 1019 aa22.64■■□□□ 1.22
LYSMD4-201ENST00000332728 CD2BP2O95400 341 aaKnown RBP22.63■■□□□ 1.21
LYSMD4-201ENST00000332728 ANKRD44Q8N8A2 993 aa22.63■■□□□ 1.21
LYSMD4-201ENST00000332728 AXIN2Q9Y2T1 843 aa22.63■■□□□ 1.21
LYSMD4-201ENST00000332728 RTL1A6NKG5 1358 aa22.62■■□□□ 1.21
LYSMD4-201ENST00000332728 HDGFL1Q5TGJ6 251 aa22.62■■□□□ 1.21
LYSMD4-201ENST00000332728 PRAMEF22A3QJZ6 481 aa22.62■■□□□ 1.21
LYSMD4-201ENST00000332728 ZNF530Q6P9A1 599 aaPredicted RBP22.62■■□□□ 1.21
LYSMD4-201ENST00000332728 DCTPP1Q9H773 170 aa22.62■■□□□ 1.21
LYSMD4-201ENST00000332728 KDRP35968 1356 aa22.61■■□□□ 1.21
LYSMD4-201ENST00000332728 TAF7Q15545 349 aaPredicted RBP22.61■■□□□ 1.21
LYSMD4-201ENST00000332728 BMP2KLQ5H9B9 411 aa22.61■■□□□ 1.21
LYSMD4-201ENST00000332728 CHMP4BQ9H444 224 aaKnown RBP22.61■■□□□ 1.21
LYSMD4-201ENST00000332728 GCP02774 474 aa22.61■■□□□ 1.21
LYSMD4-201ENST00000332728 PNMA6EA0A0J9YXQ4 647 aa22.6■■□□□ 1.21
LYSMD4-201ENST00000332728 HSPA2P54652 639 aa22.6■■□□□ 1.21
LYSMD4-201ENST00000332728 GZF1Q9H116 711 aaPredicted RBP22.6■■□□□ 1.21
LYSMD4-201ENST00000332728 IP6K1Q92551 441 aa22.6■■□□□ 1.21
LYSMD4-201ENST00000332728 NALCNQ8IZF0 1738 aa22.59■■□□□ 1.21
LYSMD4-201ENST00000332728 USP35Q9P2H5 1018 aa22.59■■□□□ 1.21
LYSMD4-201ENST00000332728 MAP3K5Q99683 1374 aa22.59■■□□□ 1.21
LYSMD4-201ENST00000332728 KIAA0232Q92628 1395 aa22.59■■□□□ 1.21
LYSMD4-201ENST00000332728 LRRFIP2Q9Y608 721 aaKnown RBP22.58■■□□□ 1.21
LYSMD4-201ENST00000332728 HSCBQ8IWL3 235 aa22.58■■□□□ 1.21
LYSMD4-201ENST00000332728 XRN1Q8IZH2 1706 aaKnown RBP22.58■■□□□ 1.2
LYSMD4-201ENST00000332728 GSE1Q14687 1217 aa22.58■■□□□ 1.2
LYSMD4-201ENST00000332728 CCDC30Q5VVM6 783 aa22.58■■□□□ 1.2
LYSMD4-201ENST00000332728 PTPRCP08575 1304 aa22.57■■□□□ 1.2
LYSMD4-201ENST00000332728 ATP10DQ9P241 1426 aa22.57■■□□□ 1.2
LYSMD4-201ENST00000332728 IL27Q8NEV9 243 aa22.57■■□□□ 1.2
LYSMD4-201ENST00000332728 ANTXR1Q9H6X2 564 aa22.57■■□□□ 1.2
LYSMD4-201ENST00000332728 RGPD1P0DJD0 1748 aa22.57■■□□□ 1.2
LYSMD4-201ENST00000332728 KRT28Q7Z3Y7 464 aa22.57■■□□□ 1.2
LYSMD4-201ENST00000332728 IL1RAPL2Q9NP60 686 aa22.57■■□□□ 1.2
LYSMD4-201ENST00000332728 CHPF2Q9P2E5 772 aa22.57■■□□□ 1.2
LYSMD4-201ENST00000332728 CHRNA2Q15822 529 aa22.56■■□□□ 1.2
LYSMD4-201ENST00000332728 FMN2Q9NZ56 1722 aa22.56■■□□□ 1.2
LYSMD4-201ENST00000332728 TEFQ10587 303 aa22.56■■□□□ 1.2
LYSMD4-201ENST00000332728 ANKRD24Q8TF21 1146 aa22.56■■□□□ 1.2
LYSMD4-201ENST00000332728 MAP4K4O95819 1239 aaPredicted RBP22.55■■□□□ 1.2
LYSMD4-201ENST00000332728 HSP90AA1P07900 732 aaKnown RBP22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms