RNA–Protein interactions for RNA: ENST00000332556.4

LAMP1-201, Transcript of lysosomal associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMP1, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-201ENST00000332556 XRCC6P12956 609 aaKnown RBP eCLIP23.8■■□□□ 1.4
LAMP1-201ENST00000332556 OTUD7AQ8TE49 926 aaPredicted RBP23.8■■□□□ 1.4
LAMP1-201ENST00000332556 FOXD4L1Q9NU39 408 aa23.8■■□□□ 1.4
LAMP1-201ENST00000332556 KNDC1Q76NI1 1749 aa23.79■■□□□ 1.4
LAMP1-201ENST00000332556 SMARCA5O60264 1052 aaPredicted RBP23.79■■□□□ 1.4
LAMP1-201ENST00000332556 EYA1Q99502 592 aa23.79■■□□□ 1.4
LAMP1-201ENST00000332556 SLC4A2P04920 1241 aa23.79■■□□□ 1.4
LAMP1-201ENST00000332556 MCM4P33991 863 aa23.79■■□□□ 1.4
LAMP1-201ENST00000332556 PTCH1Q13635 1447 aa23.79■■□□□ 1.4
LAMP1-201ENST00000332556 CHL1O00533 1208 aa23.77■■□□□ 1.4
LAMP1-201ENST00000332556 BRPF1P55201 1214 aaPredicted RBP23.77■■□□□ 1.4
LAMP1-201ENST00000332556 MEIS3Q99687 375 aa23.77■■□□□ 1.4
LAMP1-201ENST00000332556 GOLGA6L3A6NEY3 463 aa23.77■■□□□ 1.39
LAMP1-201ENST00000332556 ARHGAP45Q92619 1136 aa23.77■■□□□ 1.39
LAMP1-201ENST00000332556 RBM42Q9BTD8 480 aaKnown RBP23.77■■□□□ 1.39
LAMP1-201ENST00000332556 ZNF428Q96B54 188 aa23.76■■□□□ 1.39
LAMP1-201ENST00000332556 TSPYL4Q9UJ04 414 aa23.76■■□□□ 1.39
LAMP1-201ENST00000332556 API5Q9BZZ5 524 aaKnown RBP23.75■■□□□ 1.39
LAMP1-201ENST00000332556 MSH6P52701 1360 aa23.73■■□□□ 1.39
LAMP1-201ENST00000332556 RTF1Q92541 710 aaKnown RBP23.73■■□□□ 1.39
LAMP1-201ENST00000332556 ABTB2Q8N961 1025 aa23.73■■□□□ 1.39
LAMP1-201ENST00000332556 NRKQ7Z2Y5 1582 aa23.72■■□□□ 1.39
LAMP1-201ENST00000332556 XPCQ01831 940 aaPredicted RBP23.72■■□□□ 1.39
LAMP1-201ENST00000332556 TBC1D9Q6ZT07 1266 aa23.72■■□□□ 1.39
LAMP1-201ENST00000332556 TRAK2O60296 914 aa23.71■■□□□ 1.39
LAMP1-201ENST00000332556 CD2BP2O95400 341 aaKnown RBP23.71■■□□□ 1.39
LAMP1-201ENST00000332556 GSPT1P15170 499 aaKnown RBP23.71■■□□□ 1.39
LAMP1-201ENST00000332556 PIK3R4Q99570 1358 aa23.71■■□□□ 1.39
LAMP1-201ENST00000332556 SETD1BQ9UPS6 1966 aaKnown RBP23.71■■□□□ 1.39
LAMP1-201ENST00000332556 CEP170BQ9Y4F5 1589 aaPredicted RBP23.71■■□□□ 1.39
LAMP1-201ENST00000332556 GCC1Q96CN9 775 aa23.71■■□□□ 1.39
LAMP1-201ENST00000332556 CHMP5Q9NZZ3 219 aa23.7■■□□□ 1.39
LAMP1-201ENST00000332556 TBX22Q9Y458 520 aa23.7■■□□□ 1.39
LAMP1-201ENST00000332556 THEMISQ8N1K5 641 aaPredicted RBP23.7■■□□□ 1.38
LAMP1-201ENST00000332556 FSD2A1L4K1 749 aa23.69■■□□□ 1.38
LAMP1-201ENST00000332556 RGS12O14924 1447 aa23.69■■□□□ 1.38
LAMP1-201ENST00000332556 TSHZ3Q63HK5 1081 aa23.68■■□□□ 1.38
LAMP1-201ENST00000332556 SSH2Q76I76 1423 aa23.68■■□□□ 1.38
LAMP1-201ENST00000332556 CRB1P82279 1406 aa23.68■■□□□ 1.38
LAMP1-201ENST00000332556 TOPAZ1Q8N9V7 1692 aa23.68■■□□□ 1.38
LAMP1-201ENST00000332556 USP31Q70CQ4 1352 aa23.68■■□□□ 1.38
LAMP1-201ENST00000332556 BMP2KLQ5H9B9 411 aa23.67■■□□□ 1.38
LAMP1-201ENST00000332556 DIP2AQ14689 1571 aa23.66■■□□□ 1.38
LAMP1-201ENST00000332556 CEP85Q6P2H3 762 aa23.66■■□□□ 1.38
LAMP1-201ENST00000332556 PLEKHM2Q8IWE5 1019 aa23.66■■□□□ 1.38
LAMP1-201ENST00000332556 HSCBQ8IWL3 235 aa23.66■■□□□ 1.38
LAMP1-201ENST00000332556 UBE2Q2Q8WVN8 375 aa23.66■■□□□ 1.38
LAMP1-201ENST00000332556 HOXC9P31274 260 aa23.66■■□□□ 1.38
LAMP1-201ENST00000332556 FLT4P35916 1363 aa23.65■■□□□ 1.38
LAMP1-201ENST00000332556 INTS3Q68E01 1043 aaKnown RBP23.65■■□□□ 1.38
LAMP1-201ENST00000332556 SBNO1A3KN83 1393 aa23.64■■□□□ 1.37
LAMP1-201ENST00000332556 KIF2CQ99661 725 aa23.64■■□□□ 1.37
LAMP1-201ENST00000332556 LMOD2Q6P5Q4 547 aa23.62■■□□□ 1.37
LAMP1-201ENST00000332556 DCTPP1Q9H773 170 aa23.62■■□□□ 1.37
LAMP1-201ENST00000332556 TTC21AQ8NDW8 1320 aa23.62■■□□□ 1.37
LAMP1-201ENST00000332556 IL17REQ8NFR9 667 aa23.61■■□□□ 1.37
LAMP1-201ENST00000332556 EXOC6BQ9Y2D4 811 aa23.61■■□□□ 1.37
LAMP1-201ENST00000332556 RTL1A6NKG5 1358 aa23.61■■□□□ 1.37
LAMP1-201ENST00000332556 ANKRD44Q8N8A2 993 aa23.61■■□□□ 1.37
LAMP1-201ENST00000332556 ATP10DQ9P241 1426 aa23.6■■□□□ 1.37
LAMP1-201ENST00000332556 NAP1L5Q96NT1 182 aaPredicted RBP23.6■■□□□ 1.37
LAMP1-201ENST00000332556 IGSF1Q8N6C5 1336 aa23.6■■□□□ 1.37
LAMP1-201ENST00000332556 CHMP4BQ9H444 224 aaKnown RBP23.6■■□□□ 1.37
LAMP1-201ENST00000332556 PIK3C2AO00443 1686 aa23.6■■□□□ 1.37
LAMP1-201ENST00000332556 FKBP5Q13451 457 aaPredicted RBP23.59■■□□□ 1.37
LAMP1-201ENST00000332556 LRRC59Q96AG4 307 aaKnown RBP23.59■■□□□ 1.37
LAMP1-201ENST00000332556 ESCO1Q5FWF5 840 aa23.59■■□□□ 1.37
LAMP1-201ENST00000332556 ARHGEF10O15013 1369 aa23.59■■□□□ 1.37
LAMP1-201ENST00000332556 RBM25P49756 843 aaKnown RBP23.58■■□□□ 1.37
LAMP1-201ENST00000332556 HSP90AB1P08238 724 aaKnown RBP23.58■■□□□ 1.37
LAMP1-201ENST00000332556 RGPD1P0DJD0 1748 aa23.58■■□□□ 1.37
LAMP1-201ENST00000332556 FER1L4A9Z1Z3 1794 aa23.58■■□□□ 1.36
LAMP1-201ENST00000332556 NALCNQ8IZF0 1738 aa23.58■■□□□ 1.36
LAMP1-201ENST00000332556 ANXA1P04083 346 aa23.57■■□□□ 1.36
LAMP1-201ENST00000332556 EIF2S2P20042 333 aaKnown RBP23.57■■□□□ 1.36
LAMP1-201ENST00000332556 ARHGAP23Q9P227 1491 aa23.57■■□□□ 1.36
LAMP1-201ENST00000332556 GNAT3A8MTJ3 354 aa23.56■■□□□ 1.36
LAMP1-201ENST00000332556 GAS2L2Q8NHY3 880 aa23.56■■□□□ 1.36
LAMP1-201ENST00000332556 PHAXQ9H814 394 aaKnown RBP23.56■■□□□ 1.36
LAMP1-201ENST00000332556 GRPEL1Q9HAV7 217 aa23.56■■□□□ 1.36
LAMP1-201ENST00000332556 LGR6Q9HBX8 967 aa23.56■■□□□ 1.36
LAMP1-201ENST00000332556 SLIT1O75093 1534 aa23.56■■□□□ 1.36
LAMP1-201ENST00000332556 KIAA0232Q92628 1395 aa23.55■■□□□ 1.36
LAMP1-201ENST00000332556 TTC22Q5TAA0 569 aa23.55■■□□□ 1.36
LAMP1-201ENST00000332556 TNPO1Q92973 898 aaKnown RBP23.55■■□□□ 1.36
LAMP1-201ENST00000332556 PHF8Q9UPP1 1060 aa23.55■■□□□ 1.36
LAMP1-201ENST00000332556 KCNQ3O43525 872 aa23.55■■□□□ 1.36
LAMP1-201ENST00000332556 CDC45O75419 566 aa23.55■■□□□ 1.36
LAMP1-201ENST00000332556 HSP90AA1P07900 732 aaKnown RBP23.55■■□□□ 1.36
LAMP1-201ENST00000332556 SDSP20132 328 aa23.55■■□□□ 1.36
LAMP1-201ENST00000332556 MRE11P49959 708 aa23.55■■□□□ 1.36
LAMP1-201ENST00000332556 FLIIQ13045 1269 aa23.54■■□□□ 1.36
LAMP1-201ENST00000332556 NBPF6Q5VWK0 638 aa23.54■■□□□ 1.36
LAMP1-201ENST00000332556 NBPF4Q96M43 638 aa23.54■■□□□ 1.36
LAMP1-201ENST00000332556 STK31Q9BXU1 1019 aa23.54■■□□□ 1.36
LAMP1-201ENST00000332556 FMN2Q9NZ56 1722 aa23.53■■□□□ 1.36
LAMP1-201ENST00000332556 PNMA6EA0A0J9YXQ4 647 aa23.53■■□□□ 1.36
LAMP1-201ENST00000332556 DDX11L8A8MPP1 907 aa23.53■■□□□ 1.36
LAMP1-201ENST00000332556 ORAI2Q96SN7 254 aa23.53■■□□□ 1.36
LAMP1-201ENST00000332556 PTPRCP08575 1304 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms