RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 MFAP1P55081 439 aaKnown RBP18.3■□□□□ 0.52
TPM3-206ENST00000330188 AMPHP49418 695 aa18.29■□□□□ 0.52
TPM3-206ENST00000330188 ANKRD45Q5TZF3 282 aa18.29■□□□□ 0.52
TPM3-206ENST00000330188 INTS3Q68E01 1043 aaKnown RBP18.29■□□□□ 0.52
TPM3-206ENST00000330188 EYA1Q99502 592 aa18.29■□□□□ 0.52
TPM3-206ENST00000330188 C22orf23Q9BZE7 217 aa18.29■□□□□ 0.52
TPM3-206ENST00000330188 FOXO3O43524 673 aa18.29■□□□□ 0.52
TPM3-206ENST00000330188 TBC1D2Q9BYX2 928 aa18.29■□□□□ 0.52
TPM3-206ENST00000330188 NLRP6P59044 892 aa18.28■□□□□ 0.52
TPM3-206ENST00000330188 BCL11AQ9H165 835 aa18.28■□□□□ 0.52
TPM3-206ENST00000330188 CHD2O14647 1828 aaKnown RBP18.28■□□□□ 0.52
TPM3-206ENST00000330188 LRRC37A3O60309 1634 aa18.27■□□□□ 0.52
TPM3-206ENST00000330188 FRAT2O75474 233 aaPredicted RBP18.26■□□□□ 0.51
TPM3-206ENST00000330188 BMP2KLQ5H9B9 411 aa18.26■□□□□ 0.51
TPM3-206ENST00000330188 NWD1Q149M9 1564 aa18.26■□□□□ 0.51
TPM3-206ENST00000330188 RTF1Q92541 710 aaKnown RBP18.26■□□□□ 0.51
TPM3-206ENST00000330188 DNAJC5Q9H3Z4 198 aa18.26■□□□□ 0.51
TPM3-206ENST00000330188 PTPRCP08575 1304 aa18.26■□□□□ 0.51
TPM3-206ENST00000330188 GAS2L2Q8NHY3 880 aa18.25■□□□□ 0.51
TPM3-206ENST00000330188 HOXC9P31274 260 aa18.25■□□□□ 0.51
TPM3-206ENST00000330188 ANTXR1Q9H6X2 564 aa18.25■□□□□ 0.51
TPM3-206ENST00000330188 MIS18AQ9NYP9 233 aa18.25■□□□□ 0.51
TPM3-206ENST00000330188 ZNF142P52746 1687 aaPredicted RBP18.25■□□□□ 0.51
TPM3-206ENST00000330188 ATP10DQ9P241 1426 aa18.24■□□□□ 0.51
TPM3-206ENST00000330188 NUTM2GQ5VZR2 741 aa18.24■□□□□ 0.51
TPM3-206ENST00000330188 SLKQ9H2G2 1235 aaPredicted RBP18.24■□□□□ 0.51
TPM3-206ENST00000330188 TSPYL4Q9UJ04 414 aa18.23■□□□□ 0.51
TPM3-206ENST00000330188 MSH6P52701 1360 aa18.23■□□□□ 0.51
TPM3-206ENST00000330188 TRHP20396 242 aaPredicted RBP18.23■□□□□ 0.51
TPM3-206ENST00000330188 HTATSF1O43719 755 aaKnown RBP18.22■□□□□ 0.51
TPM3-206ENST00000330188 ABTB2Q8N961 1025 aa18.22■□□□□ 0.51
TPM3-206ENST00000330188 DCTPP1Q9H773 170 aa18.22■□□□□ 0.51
TPM3-206ENST00000330188 SLC4A2P04920 1241 aa18.21■□□□□ 0.51
TPM3-206ENST00000330188 ANKRD44Q8N8A2 993 aa18.21■□□□□ 0.51
TPM3-206ENST00000330188 LTN1O94822 1766 aa18.21■□□□□ 0.51
TPM3-206ENST00000330188 RBM25P49756 843 aaKnown RBP18.2■□□□□ 0.5
TPM3-206ENST00000330188 RTL1A6NKG5 1358 aa18.2■□□□□ 0.5
TPM3-206ENST00000330188 GSE1Q14687 1217 aa18.2■□□□□ 0.5
TPM3-206ENST00000330188 ANKLE2Q86XL3 938 aa18.19■□□□□ 0.5
TPM3-206ENST00000330188 PHF8Q9UPP1 1060 aa18.19■□□□□ 0.5
TPM3-206ENST00000330188 FAM208AQ9UK61 1670 aaKnown RBP18.19■□□□□ 0.5
TPM3-206ENST00000330188 CEP85Q6P2H3 762 aa18.19■□□□□ 0.5
TPM3-206ENST00000330188 RPAP2Q8IXW5 612 aaPredicted RBP18.19■□□□□ 0.5
TPM3-206ENST00000330188 MEIS3Q99687 375 aa18.18■□□□□ 0.5
TPM3-206ENST00000330188 GNAT3A8MTJ3 354 aa18.17■□□□□ 0.5
TPM3-206ENST00000330188 G2E3Q7L622 706 aa18.17■□□□□ 0.5
TPM3-206ENST00000330188 MAP3K5Q99683 1374 aa18.17■□□□□ 0.5
TPM3-206ENST00000330188 NFAT5O94916 1531 aa18.16■□□□□ 0.5
TPM3-206ENST00000330188 TBC1D9Q6ZT07 1266 aa18.16■□□□□ 0.5
TPM3-206ENST00000330188 PLEKHM2Q8IWE5 1019 aa18.16■□□□□ 0.5
TPM3-206ENST00000330188 LTV1Q96GA3 475 aaPredicted RBP18.16■□□□□ 0.5
TPM3-206ENST00000330188 ADGRL3Q9HAR2 1447 aa18.15■□□□□ 0.5
TPM3-206ENST00000330188 GSPT1P15170 499 aaKnown RBP18.15■□□□□ 0.5
TPM3-206ENST00000330188 C14orf37Q86TY3 774 aa18.15■□□□□ 0.5
TPM3-206ENST00000330188 ADAMTSL3P82987 1691 aa18.15■□□□□ 0.5
TPM3-206ENST00000330188 IL17REQ8NFR9 667 aa18.14■□□□□ 0.5
TPM3-206ENST00000330188 RBM33Q96EV2 1170 aaKnown RBP18.14■□□□□ 0.5
TPM3-206ENST00000330188 CACNA1FO60840 1977 aa18.14■□□□□ 0.49
TPM3-206ENST00000330188 F6X3S4 739 aa18.13■□□□□ 0.49
TPM3-206ENST00000330188 CCT4P50991 539 aaKnown RBP18.13■□□□□ 0.49
TPM3-206ENST00000330188 HSCBQ8IWL3 235 aa18.13■□□□□ 0.49
TPM3-206ENST00000330188 SPRYD3Q8NCJ5 442 aa18.13■□□□□ 0.49
TPM3-206ENST00000330188 STK31Q9BXU1 1019 aa18.13■□□□□ 0.49
TPM3-206ENST00000330188 CDC45O75419 566 aa18.12■□□□□ 0.49
TPM3-206ENST00000330188 SLC4A10Q6U841 1118 aa18.12■□□□□ 0.49
TPM3-206ENST00000330188 C16orf71Q8IYS4 520 aaPredicted RBP18.12■□□□□ 0.49
TPM3-206ENST00000330188 USHBP1Q8N6Y0 703 aa18.12■□□□□ 0.49
TPM3-206ENST00000330188 IP6K1Q92551 441 aa18.12■□□□□ 0.49
TPM3-206ENST00000330188 SNX21Q969T3 373 aa18.12■□□□□ 0.49
TPM3-206ENST00000330188 N4BP2Q86UW6 1770 aaPredicted RBP18.12■□□□□ 0.49
TPM3-206ENST00000330188 PHRF1Q9P1Y6 1649 aaKnown RBP18.12■□□□□ 0.49
TPM3-206ENST00000330188 TTC22Q5TAA0 569 aa18.11■□□□□ 0.49
TPM3-206ENST00000330188 KIF2CQ99661 725 aa18.11■□□□□ 0.49
TPM3-206ENST00000330188 BABAM1Q9NWV8 329 aa18.11■□□□□ 0.49
TPM3-206ENST00000330188 SETD1BQ9UPS6 1966 aaKnown RBP18.11■□□□□ 0.49
TPM3-206ENST00000330188 CCDC30Q5VVM6 783 aa18.11■□□□□ 0.49
TPM3-206ENST00000330188 NCOA3Q9Y6Q9 1424 aa18.11■□□□□ 0.49
TPM3-206ENST00000330188 SOS1Q07889 1333 aaPredicted RBP18.11■□□□□ 0.49
TPM3-206ENST00000330188 TAF7Q15545 349 aaPredicted RBP18.1■□□□□ 0.49
TPM3-206ENST00000330188 FLIIQ13045 1269 aa18.1■□□□□ 0.49
TPM3-206ENST00000330188 RGPD2P0DJD1 1756 aa18.09■□□□□ 0.49
TPM3-206ENST00000330188 ESCO1Q5FWF5 840 aa18.09■□□□□ 0.49
TPM3-206ENST00000330188 OTUD7AQ8TE49 926 aaPredicted RBP18.09■□□□□ 0.49
TPM3-206ENST00000330188 SMARCA5O60264 1052 aaPredicted RBP18.08■□□□□ 0.49
TPM3-206ENST00000330188 PSME1Q06323 249 aa18.08■□□□□ 0.49
TPM3-206ENST00000330188 CHMP5Q9NZZ3 219 aa18.08■□□□□ 0.49
TPM3-206ENST00000330188 MED1Q15648 1581 aaPredicted RBP18.08■□□□□ 0.49
TPM3-206ENST00000330188 NPHP4O75161 1426 aaPredicted RBP18.08■□□□□ 0.48
TPM3-206ENST00000330188 HMMRO75330 724 aa18.08■□□□□ 0.48
TPM3-206ENST00000330188 CEMIPQ8WUJ3 1361 aa18.07■□□□□ 0.48
TPM3-206ENST00000330188 FKBP5Q13451 457 aaPredicted RBP18.07■□□□□ 0.48
TPM3-206ENST00000330188 NBPF6Q5VWK0 638 aa18.07■□□□□ 0.48
TPM3-206ENST00000330188 KCNH5Q8NCM2 988 aa18.07■□□□□ 0.48
TPM3-206ENST00000330188 NECTIN2Q92692 538 aa18.07■□□□□ 0.48
TPM3-206ENST00000330188 NBPF4Q96M43 638 aa18.07■□□□□ 0.48
TPM3-206ENST00000330188 PXDNLA1KZ92 1463 aa18.05■□□□□ 0.48
TPM3-206ENST00000330188 APBB1O00213 710 aa18.05■□□□□ 0.48
TPM3-206ENST00000330188 GNAI2P04899 355 aa18.05■□□□□ 0.48
TPM3-206ENST00000330188 KDM3BQ7LBC6 1761 aa18.05■□□□□ 0.48
TPM3-206ENST00000330188 LMO7Q8WWI1 1683 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms