RNA–Protein interactions for RNA: ENST00000324616.9

C12orf40-201, Transcript of chromosome 12 open reading frame 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C12orf40, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf40-201ENST00000324616 RGPD2P0DJD1 1756 aa13.58□□□□□ -0.23
C12orf40-201ENST00000324616 KIAA0232Q92628 1395 aa13.58□□□□□ -0.24
C12orf40-201ENST00000324616 MIS18AQ9NYP9 233 aa13.58□□□□□ -0.24
C12orf40-201ENST00000324616 RGS12O14924 1447 aa13.58□□□□□ -0.24
C12orf40-201ENST00000324616 NPHP4O75161 1426 aaPredicted RBP13.58□□□□□ -0.24
C12orf40-201ENST00000324616 NFAT5O94916 1531 aa13.58□□□□□ -0.24
C12orf40-201ENST00000324616 C14orf37Q86TY3 774 aa13.57□□□□□ -0.24
C12orf40-201ENST00000324616 API5Q9BZZ5 524 aaKnown RBP13.56□□□□□ -0.24
C12orf40-201ENST00000324616 NUCB1Q02818 461 aa13.55□□□□□ -0.24
C12orf40-201ENST00000324616 SIRT2Q8IXJ6 389 aa13.55□□□□□ -0.24
C12orf40-201ENST00000324616 ESCO1Q5FWF5 840 aa13.55□□□□□ -0.24
C12orf40-201ENST00000324616 RTF1Q92541 710 aaKnown RBP13.55□□□□□ -0.24
C12orf40-201ENST00000324616 LTV1Q96GA3 475 aaPredicted RBP13.55□□□□□ -0.24
C12orf40-201ENST00000324616 GAS2L2Q8NHY3 880 aa13.54□□□□□ -0.24
C12orf40-201ENST00000324616 FAM208AQ9UK61 1670 aaKnown RBP13.54□□□□□ -0.24
C12orf40-201ENST00000324616 PHRF1Q9P1Y6 1649 aaKnown RBP13.54□□□□□ -0.24
C12orf40-201ENST00000324616 LNPKQ9C0E8 428 aa13.54□□□□□ -0.24
C12orf40-201ENST00000324616 CHMP4BQ9H444 224 aaKnown RBP13.54□□□□□ -0.24
C12orf40-201ENST00000324616 RTL1A6NKG5 1358 aa13.54□□□□□ -0.24
C12orf40-201ENST00000324616 TSPYL4Q9UJ04 414 aa13.53□□□□□ -0.24
C12orf40-201ENST00000324616 HAP1P54257 671 aaPredicted RBP13.53□□□□□ -0.24
C12orf40-201ENST00000324616 INTS3Q68E01 1043 aaKnown RBP13.53□□□□□ -0.24
C12orf40-201ENST00000324616 CHD1LQ86WJ1 897 aa13.53□□□□□ -0.24
C12orf40-201ENST00000324616 CACNA1FO60840 1977 aa13.53□□□□□ -0.24
C12orf40-201ENST00000324616 PSME1Q06323 249 aa13.52□□□□□ -0.24
C12orf40-201ENST00000324616 USHBP1Q8N6Y0 703 aa13.52□□□□□ -0.24
C12orf40-201ENST00000324616 MSH6P52701 1360 aa13.52□□□□□ -0.25
C12orf40-201ENST00000324616 ORAI2Q96SN7 254 aa13.52□□□□□ -0.25
C12orf40-201ENST00000324616 TRPM3Q9HCF6 1732 aaPredicted RBP13.52□□□□□ -0.25
C12orf40-201ENST00000324616 TBC1D32Q96NH3 1257 aa13.51□□□□□ -0.25
C12orf40-201ENST00000324616 GNAT3A8MTJ3 354 aa13.51□□□□□ -0.25
C12orf40-201ENST00000324616 GCC1Q96CN9 775 aa13.51□□□□□ -0.25
C12orf40-201ENST00000324616 DAXXQ9UER7 740 aaPredicted RBP13.51□□□□□ -0.25
C12orf40-201ENST00000324616 HTATSF1O43719 755 aaKnown RBP13.5□□□□□ -0.25
C12orf40-201ENST00000324616 SLC4A2P04920 1241 aa13.5□□□□□ -0.25
C12orf40-201ENST00000324616 IP6K1Q92551 441 aa13.5□□□□□ -0.25
C12orf40-201ENST00000324616 PTPRCP08575 1304 aa13.5□□□□□ -0.25
C12orf40-201ENST00000324616 MAP3K5Q99683 1374 aa13.5□□□□□ -0.25
C12orf40-201ENST00000324616 ATP10DQ9P241 1426 aa13.5□□□□□ -0.25
C12orf40-201ENST00000324616 XPCQ01831 940 aaPredicted RBP13.5□□□□□ -0.25
C12orf40-201ENST00000324616 ANKRD45Q5TZF3 282 aa13.5□□□□□ -0.25
C12orf40-201ENST00000324616 IL17REQ8NFR9 667 aa13.5□□□□□ -0.25
C12orf40-201ENST00000324616 G2E3Q7L622 706 aa13.49□□□□□ -0.25
C12orf40-201ENST00000324616 RGPD5Q99666 1765 aa13.49□□□□□ -0.25
C12orf40-201ENST00000324616 NBPF6Q5VWK0 638 aa13.49□□□□□ -0.25
C12orf40-201ENST00000324616 NBPF4Q96M43 638 aa13.49□□□□□ -0.25
C12orf40-201ENST00000324616 UPF2Q9HAU5 1272 aaKnown RBP13.49□□□□□ -0.25
C12orf40-201ENST00000324616 SLIT3O75094 1523 aa13.48□□□□□ -0.25
C12orf40-201ENST00000324616 STRCP1A6NGW2 1772 aa13.48□□□□□ -0.25
C12orf40-201ENST00000324616 LMO7Q8WWI1 1683 aa13.47□□□□□ -0.25
C12orf40-201ENST00000324616 ZBTB7CA1YPR0 619 aa13.47□□□□□ -0.25
C12orf40-201ENST00000324616 N4BP2Q86UW6 1770 aaPredicted RBP13.47□□□□□ -0.25
C12orf40-201ENST00000324616 RTL5Q5HYW3 569 aaPredicted RBP13.47□□□□□ -0.25
C12orf40-201ENST00000324616 KCNH5Q8NCM2 988 aa13.47□□□□□ -0.25
C12orf40-201ENST00000324616 KIF1AQ12756 1690 aa13.46□□□□□ -0.25
C12orf40-201ENST00000324616 MEIS3Q99687 375 aa13.46□□□□□ -0.25
C12orf40-201ENST00000324616 KDM3BQ7LBC6 1761 aa13.46□□□□□ -0.25
C12orf40-201ENST00000324616 MED1Q15648 1581 aaPredicted RBP13.46□□□□□ -0.25
C12orf40-201ENST00000324616 F6X3S4 739 aa13.46□□□□□ -0.26
C12orf40-201ENST00000324616 PLEKHG5O94827 1062 aa13.46□□□□□ -0.26
C12orf40-201ENST00000324616 MFAP1P55081 439 aaKnown RBP13.46□□□□□ -0.26
C12orf40-201ENST00000324616 PROSER2Q86WR7 435 aaPredicted RBP13.45□□□□□ -0.26
C12orf40-201ENST00000324616 LRRC59Q96AG4 307 aaKnown RBP13.45□□□□□ -0.26
C12orf40-201ENST00000324616 GCP02774 474 aa13.45□□□□□ -0.26
C12orf40-201ENST00000324616 ANKRD44Q8N8A2 993 aa13.45□□□□□ -0.26
C12orf40-201ENST00000324616 DCTPP1Q9H773 170 aa13.45□□□□□ -0.26
C12orf40-201ENST00000324616 ALS2Q96Q42 1657 aa13.45□□□□□ -0.26
C12orf40-201ENST00000324616 CEMIPQ8WUJ3 1361 aa13.45□□□□□ -0.26
C12orf40-201ENST00000324616 C1orf167Q5SNV9 1468 aa13.44□□□□□ -0.26
C12orf40-201ENST00000324616 TAF7Q15545 349 aaPredicted RBP13.44□□□□□ -0.26
C12orf40-201ENST00000324616 BMP2KLQ5H9B9 411 aa13.44□□□□□ -0.26
C12orf40-201ENST00000324616 CEP85Q6P2H3 762 aa13.44□□□□□ -0.26
C12orf40-201ENST00000324616 CAMTA1Q9Y6Y1 1673 aa13.44□□□□□ -0.26
C12orf40-201ENST00000324616 DEKP35659 375 aaKnown RBP13.43□□□□□ -0.26
C12orf40-201ENST00000324616 SLC4A10Q6U841 1118 aa13.43□□□□□ -0.26
C12orf40-201ENST00000324616 ARHGEF25Q86VW2 580 aa13.43□□□□□ -0.26
C12orf40-201ENST00000324616 NECTIN2Q92692 538 aa13.43□□□□□ -0.26
C12orf40-201ENST00000324616 C22orf23Q9BZE7 217 aa13.43□□□□□ -0.26
C12orf40-201ENST00000324616 LMOD2Q6P5Q4 547 aa13.43□□□□□ -0.26
C12orf40-201ENST00000324616 RPAP2Q8IXW5 612 aaPredicted RBP13.43□□□□□ -0.26
C12orf40-201ENST00000324616 STK31Q9BXU1 1019 aa13.43□□□□□ -0.26
C12orf40-201ENST00000324616 LGR6Q9HBX8 967 aa13.43□□□□□ -0.26
C12orf40-201ENST00000324616 USP35Q9P2H5 1018 aa13.43□□□□□ -0.26
C12orf40-201ENST00000324616 NCAPD2Q15021 1401 aa13.42□□□□□ -0.26
C12orf40-201ENST00000324616 BECN1Q14457 450 aa13.42□□□□□ -0.26
C12orf40-201ENST00000324616 NFKBIBQ15653 356 aa13.42□□□□□ -0.26
C12orf40-201ENST00000324616 FLIIQ13045 1269 aa13.42□□□□□ -0.26
C12orf40-201ENST00000324616 CCDC30Q5VVM6 783 aa13.42□□□□□ -0.26
C12orf40-201ENST00000324616 KRT28Q7Z3Y7 464 aa13.42□□□□□ -0.26
C12orf40-201ENST00000324616 TBC1D2Q9BYX2 928 aa13.42□□□□□ -0.26
C12orf40-201ENST00000324616 BABAM1Q9NWV8 329 aa13.42□□□□□ -0.26
C12orf40-201ENST00000324616 PXDNQ92626 1479 aa13.42□□□□□ -0.26
C12orf40-201ENST00000324616 C19orf44Q9H6X5 657 aa13.41□□□□□ -0.26
C12orf40-201ENST00000324616 CCT4P50991 539 aaKnown RBP13.4□□□□□ -0.26
C12orf40-201ENST00000324616 PLEKHM2Q8IWE5 1019 aa13.4□□□□□ -0.26
C12orf40-201ENST00000324616 AXIN2Q9Y2T1 843 aa13.4□□□□□ -0.26
C12orf40-201ENST00000324616 FKBP5Q13451 457 aaPredicted RBP13.4□□□□□ -0.26
C12orf40-201ENST00000324616 C16orf71Q8IYS4 520 aaPredicted RBP13.4□□□□□ -0.26
C12orf40-201ENST00000324616 SIPA1L3O60292 1781 aaPredicted RBP13.4□□□□□ -0.26
C12orf40-201ENST00000324616 CRYBG1Q9Y4K1 1723 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms