RNA–Protein interactions for RNA: ENST00000323347.14

SMARCD2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2 BASIC

Gene SMARCD2, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-202ENST00000323347 SIRT2Q8IXJ6 389 aa19.87■□□□□ 0.77
SMARCD2-202ENST00000323347 IGSF1Q8N6C5 1336 aa19.87■□□□□ 0.77
SMARCD2-202ENST00000323347 RGS12O14924 1447 aa19.86■□□□□ 0.77
SMARCD2-202ENST00000323347 BMP2KLQ5H9B9 411 aa19.86■□□□□ 0.77
SMARCD2-202ENST00000323347 NGDNQ8NEJ9 315 aaKnown RBP19.85■□□□□ 0.77
SMARCD2-202ENST00000323347 C22orf23Q9BZE7 217 aa19.85■□□□□ 0.77
SMARCD2-202ENST00000323347 RGPD8O14715 1765 aaPredicted RBP19.85■□□□□ 0.77
SMARCD2-202ENST00000323347 HTATSF1O43719 755 aaKnown RBP19.84■□□□□ 0.77
SMARCD2-202ENST00000323347 ANTXR1Q9H6X2 564 aa19.84■□□□□ 0.77
SMARCD2-202ENST00000323347 PTPRCP08575 1304 aa19.84■□□□□ 0.77
SMARCD2-202ENST00000323347 TBC1D2Q9BYX2 928 aa19.84■□□□□ 0.77
SMARCD2-202ENST00000323347 LNPKQ9C0E8 428 aa19.84■□□□□ 0.77
SMARCD2-202ENST00000323347 CEP170BQ9Y4F5 1589 aaPredicted RBP19.83■□□□□ 0.77
SMARCD2-202ENST00000323347 MARF1Q9Y4F3 1742 aaKnown RBP19.83■□□□□ 0.76
SMARCD2-202ENST00000323347 MCM10Q7L590 875 aa19.82■□□□□ 0.76
SMARCD2-202ENST00000323347 RBM25P49756 843 aaKnown RBP19.82■□□□□ 0.76
SMARCD2-202ENST00000323347 MTHFSDQ2M296 383 aaKnown RBP19.81■□□□□ 0.76
SMARCD2-202ENST00000323347 KCNA6P17658 529 aa19.8■□□□□ 0.76
SMARCD2-202ENST00000323347 ANKRD45Q5TZF3 282 aa19.8■□□□□ 0.76
SMARCD2-202ENST00000323347 GAS2L2Q8NHY3 880 aa19.8■□□□□ 0.76
SMARCD2-202ENST00000323347 EYA1Q99502 592 aa19.8■□□□□ 0.76
SMARCD2-202ENST00000323347 DCTPP1Q9H773 170 aa19.8■□□□□ 0.76
SMARCD2-202ENST00000323347 C1orf115Q9H7X2 142 aa19.8■□□□□ 0.76
SMARCD2-202ENST00000323347 LRRC37A3O60309 1634 aa19.79■□□□□ 0.76
SMARCD2-202ENST00000323347 NWD1Q149M9 1564 aa19.79■□□□□ 0.76
SMARCD2-202ENST00000323347 AMPHP49418 695 aa19.78■□□□□ 0.76
SMARCD2-202ENST00000323347 MFAP1P55081 439 aaKnown RBP19.78■□□□□ 0.76
SMARCD2-202ENST00000323347 RPAP2Q8IXW5 612 aaPredicted RBP19.78■□□□□ 0.76
SMARCD2-202ENST00000323347 ANKRD44Q8N8A2 993 aa19.78■□□□□ 0.76
SMARCD2-202ENST00000323347 ATP10DQ9P241 1426 aa19.78■□□□□ 0.76
SMARCD2-202ENST00000323347 FRAT2O75474 233 aaPredicted RBP19.78■□□□□ 0.76
SMARCD2-202ENST00000323347 GSE1Q14687 1217 aa19.78■□□□□ 0.76
SMARCD2-202ENST00000323347 KRT24Q2M2I5 525 aa19.78■□□□□ 0.76
SMARCD2-202ENST00000323347 RTF1Q92541 710 aaKnown RBP19.76■□□□□ 0.75
SMARCD2-202ENST00000323347 BABAM1Q9NWV8 329 aa19.76■□□□□ 0.75
SMARCD2-202ENST00000323347 SOS1Q07889 1333 aaPredicted RBP19.76■□□□□ 0.75
SMARCD2-202ENST00000323347 CHD2O14647 1828 aaKnown RBP19.76■□□□□ 0.75
SMARCD2-202ENST00000323347 RTL1A6NKG5 1358 aa19.76■□□□□ 0.75
SMARCD2-202ENST00000323347 HOXC9P31274 260 aa19.76■□□□□ 0.75
SMARCD2-202ENST00000323347 NLRP6P59044 892 aa19.76■□□□□ 0.75
SMARCD2-202ENST00000323347 FOXO3O43524 673 aa19.74■□□□□ 0.75
SMARCD2-202ENST00000323347 SNX21Q969T3 373 aa19.74■□□□□ 0.75
SMARCD2-202ENST00000323347 ZNF142P52746 1687 aaPredicted RBP19.74■□□□□ 0.75
SMARCD2-202ENST00000323347 EIF5BO60841 1220 aaKnown RBP19.74■□□□□ 0.75
SMARCD2-202ENST00000323347 SOX12O15370 315 aa19.73■□□□□ 0.75
SMARCD2-202ENST00000323347 CEP85Q6P2H3 762 aa19.72■□□□□ 0.75
SMARCD2-202ENST00000323347 TSPYL4Q9UJ04 414 aa19.72■□□□□ 0.75
SMARCD2-202ENST00000323347 SLC4A2P04920 1241 aa19.71■□□□□ 0.75
SMARCD2-202ENST00000323347 PLEKHM2Q8IWE5 1019 aa19.71■□□□□ 0.75
SMARCD2-202ENST00000323347 NCOA3Q9Y6Q9 1424 aa19.71■□□□□ 0.75
SMARCD2-202ENST00000323347 STRCQ7RTU9 1775 aa19.71■□□□□ 0.75
SMARCD2-202ENST00000323347 GNAT3A8MTJ3 354 aa19.7■□□□□ 0.74
SMARCD2-202ENST00000323347 ANKLE2Q86XL3 938 aa19.7■□□□□ 0.74
SMARCD2-202ENST00000323347 MSH6P52701 1360 aa19.7■□□□□ 0.74
SMARCD2-202ENST00000323347 CCT4P50991 539 aaKnown RBP19.7■□□□□ 0.74
SMARCD2-202ENST00000323347 SLKQ9H2G2 1235 aaPredicted RBP19.7■□□□□ 0.74
SMARCD2-202ENST00000323347 ABTB2Q8N961 1025 aa19.69■□□□□ 0.74
SMARCD2-202ENST00000323347 PHF8Q9UPP1 1060 aa19.69■□□□□ 0.74
SMARCD2-202ENST00000323347 TBC1D9Q6ZT07 1266 aa19.68■□□□□ 0.74
SMARCD2-202ENST00000323347 MIS18AQ9NYP9 233 aa19.68■□□□□ 0.74
SMARCD2-202ENST00000323347 MAP3K5Q99683 1374 aa19.68■□□□□ 0.74
SMARCD2-202ENST00000323347 CDC45O75419 566 aa19.67■□□□□ 0.74
SMARCD2-202ENST00000323347 KIF2CQ99661 725 aa19.67■□□□□ 0.74
SMARCD2-202ENST00000323347 PHRF1Q9P1Y6 1649 aaKnown RBP19.67■□□□□ 0.74
SMARCD2-202ENST00000323347 NFAT5O94916 1531 aa19.67■□□□□ 0.74
SMARCD2-202ENST00000323347 MEIS3Q99687 375 aa19.66■□□□□ 0.74
SMARCD2-202ENST00000323347 CHMP5Q9NZZ3 219 aa19.66■□□□□ 0.74
SMARCD2-202ENST00000323347 ADGRL3Q9HAR2 1447 aa19.66■□□□□ 0.74
SMARCD2-202ENST00000323347 GSPT1P15170 499 aaKnown RBP19.66■□□□□ 0.74
SMARCD2-202ENST00000323347 DDIT3P35638 169 aa19.66■□□□□ 0.74
SMARCD2-202ENST00000323347 TTC22Q5TAA0 569 aa19.66■□□□□ 0.74
SMARCD2-202ENST00000323347 G2E3Q7L622 706 aa19.66■□□□□ 0.74
SMARCD2-202ENST00000323347 HSCBQ8IWL3 235 aa19.66■□□□□ 0.74
SMARCD2-202ENST00000323347 IP6K1Q92551 441 aa19.66■□□□□ 0.74
SMARCD2-202ENST00000323347 IL17REQ8NFR9 667 aa19.65■□□□□ 0.74
SMARCD2-202ENST00000323347 CCDC30Q5VVM6 783 aa19.64■□□□□ 0.74
SMARCD2-202ENST00000323347 FAM208AQ9UK61 1670 aaKnown RBP19.64■□□□□ 0.73
SMARCD2-202ENST00000323347 TAF7Q15545 349 aaPredicted RBP19.64■□□□□ 0.73
SMARCD2-202ENST00000323347 HMMRO75330 724 aa19.63■□□□□ 0.73
SMARCD2-202ENST00000323347 STK31Q9BXU1 1019 aa19.63■□□□□ 0.73
SMARCD2-202ENST00000323347 CACNA1FO60840 1977 aa19.63■□□□□ 0.73
SMARCD2-202ENST00000323347 CEMIPQ8WUJ3 1361 aa19.63■□□□□ 0.73
SMARCD2-202ENST00000323347 N4BP2Q86UW6 1770 aaPredicted RBP19.63■□□□□ 0.73
SMARCD2-202ENST00000323347 MED1Q15648 1581 aaPredicted RBP19.62■□□□□ 0.73
SMARCD2-202ENST00000323347 PXDNLA1KZ92 1463 aa19.62■□□□□ 0.73
SMARCD2-202ENST00000323347 LTN1O94822 1766 aa19.62■□□□□ 0.73
SMARCD2-202ENST00000323347 NUTM2GQ5VZR2 741 aa19.61■□□□□ 0.73
SMARCD2-202ENST00000323347 OSBPL3Q9H4L5 887 aa19.61■□□□□ 0.73
SMARCD2-202ENST00000323347 KCNH5Q8NCM2 988 aa19.61■□□□□ 0.73
SMARCD2-202ENST00000323347 SETD1BQ9UPS6 1966 aaKnown RBP19.6■□□□□ 0.73
SMARCD2-202ENST00000323347 FLIIQ13045 1269 aa19.6■□□□□ 0.73
SMARCD2-202ENST00000323347 CIZ1Q9ULV3 898 aaPredicted RBP19.6■□□□□ 0.73
SMARCD2-202ENST00000323347 GNAI2P04899 355 aa19.59■□□□□ 0.73
SMARCD2-202ENST00000323347 NCAPD2Q15021 1401 aa19.59■□□□□ 0.73
SMARCD2-202ENST00000323347 C16orf71Q8IYS4 520 aaPredicted RBP19.59■□□□□ 0.73
SMARCD2-202ENST00000323347 LTBP4Q8N2S1 1624 aa19.59■□□□□ 0.73
SMARCD2-202ENST00000323347 F6X3S4 739 aa19.59■□□□□ 0.73
SMARCD2-202ENST00000323347 GNAI3P08754 354 aa19.58■□□□□ 0.72
SMARCD2-202ENST00000323347 MCM4P33991 863 aa19.58■□□□□ 0.72
SMARCD2-202ENST00000323347 ANO8Q9HCE9 1232 aaPredicted RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms