RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.82□□□□□ -0.68
CLK1-201ENST00000321356 SKOR2Q2VWA4 1001 aaPredicted RBP10.81□□□□□ -0.68
CLK1-201ENST00000321356 TTC22Q5TAA0 569 aa10.81□□□□□ -0.68
CLK1-201ENST00000321356 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.81□□□□□ -0.68
CLK1-201ENST00000321356 UBR1Q8IWV7 1749 aa10.81□□□□□ -0.68
CLK1-201ENST00000321356 AEBP1Q8IUX7 1158 aa10.81□□□□□ -0.68
CLK1-201ENST00000321356 RPAP2Q8IXW5 612 aaPredicted RBP10.81□□□□□ -0.68
CLK1-201ENST00000321356 RBM42Q9BTD8 480 aaKnown RBP10.81□□□□□ -0.68
CLK1-201ENST00000321356 GRPEL1Q9HAV7 217 aa10.81□□□□□ -0.68
CLK1-201ENST00000321356 RTL1A6NKG5 1358 aa10.8□□□□□ -0.68
CLK1-201ENST00000321356 GAS2L2Q8NHY3 880 aa10.8□□□□□ -0.68
CLK1-201ENST00000321356 PTPRCP08575 1304 aa10.8□□□□□ -0.68
CLK1-201ENST00000321356 TTC21BQ7Z4L5 1316 aa10.8□□□□□ -0.68
CLK1-201ENST00000321356 USP31Q70CQ4 1352 aa10.79□□□□□ -0.68
CLK1-201ENST00000321356 ROBO2Q9HCK4 1378 aa10.79□□□□□ -0.68
CLK1-201ENST00000321356 CRB1P82279 1406 aa10.79□□□□□ -0.68
CLK1-201ENST00000321356 RABEP1Q15276 862 aa10.79□□□□□ -0.68
CLK1-201ENST00000321356 SULT6B1Q6IMI4 303 aa10.79□□□□□ -0.68
CLK1-201ENST00000321356 CEP85Q6P2H3 762 aa10.79□□□□□ -0.68
CLK1-201ENST00000321356 FMN2Q9NZ56 1722 aa10.79□□□□□ -0.68
CLK1-201ENST00000321356 MSH6P52701 1360 aa10.79□□□□□ -0.68
CLK1-201ENST00000321356 USP6P35125 1406 aa10.79□□□□□ -0.68
CLK1-201ENST00000321356 ADAMTS13Q76LX8 1427 aa10.79□□□□□ -0.68
CLK1-201ENST00000321356 HDGFP51858 240 aaKnown RBP10.78□□□□□ -0.68
CLK1-201ENST00000321356 KRT24Q2M2I5 525 aa10.78□□□□□ -0.68
CLK1-201ENST00000321356 CYB5RLQ6IPT4 315 aa10.78□□□□□ -0.68
CLK1-201ENST00000321356 TMEM2Q9UHN6 1383 aa10.78□□□□□ -0.68
CLK1-201ENST00000321356 SSH2Q76I76 1423 aa10.78□□□□□ -0.68
CLK1-201ENST00000321356 PLEKHG3A1L390 1219 aa10.78□□□□□ -0.68
CLK1-201ENST00000321356 ARXQ96QS3 562 aa10.78□□□□□ -0.68
CLK1-201ENST00000321356 USP26Q9BXU7 913 aa10.78□□□□□ -0.68
CLK1-201ENST00000321356 HSP90AA1P07900 732 aaKnown RBP10.77□□□□□ -0.69
CLK1-201ENST00000321356 C16orf71Q8IYS4 520 aaPredicted RBP10.77□□□□□ -0.69
CLK1-201ENST00000321356 ARHGEF10O15013 1369 aa10.77□□□□□ -0.69
CLK1-201ENST00000321356 TNRQ92752 1358 aa10.77□□□□□ -0.69
CLK1-201ENST00000321356 IBTKQ9P2D0 1353 aaPredicted RBP10.77□□□□□ -0.69
CLK1-201ENST00000321356 SSFA2P28290 1259 aa10.76□□□□□ -0.69
CLK1-201ENST00000321356 CLCN1P35523 988 aa10.76□□□□□ -0.69
CLK1-201ENST00000321356 MLECQ14165 292 aa10.76□□□□□ -0.69
CLK1-201ENST00000321356 MCM10Q7L590 875 aa10.76□□□□□ -0.69
CLK1-201ENST00000321356 GAS2L3Q86XJ1 694 aa10.76□□□□□ -0.69
CLK1-201ENST00000321356 OTUD7AQ8TE49 926 aaPredicted RBP10.76□□□□□ -0.69
CLK1-201ENST00000321356 ACEP12821 1306 aa10.76□□□□□ -0.69
CLK1-201ENST00000321356 TUBGCP6Q96RT7 1819 aa10.76□□□□□ -0.69
CLK1-201ENST00000321356 SDSP20132 328 aa10.76□□□□□ -0.69
CLK1-201ENST00000321356 PPP4R3CPQ6ZMV5 832 aa10.76□□□□□ -0.69
CLK1-201ENST00000321356 MEIS3Q99687 375 aa10.76□□□□□ -0.69
CLK1-201ENST00000321356 KDRP35968 1356 aa10.76□□□□□ -0.69
CLK1-201ENST00000321356 LRRC37A3O60309 1634 aa10.76□□□□□ -0.69
CLK1-201ENST00000321356 CYP2E1P05181 493 aaPredicted RBP10.75□□□□□ -0.69
CLK1-201ENST00000321356 FOXD4L1Q9NU39 408 aa10.75□□□□□ -0.69
CLK1-201ENST00000321356 N4BP2Q86UW6 1770 aaPredicted RBP10.75□□□□□ -0.69
CLK1-201ENST00000321356 PLEKHG1Q9ULL1 1385 aa10.74□□□□□ -0.69
CLK1-201ENST00000321356 BAG4O95429 457 aaKnown RBP10.74□□□□□ -0.69
CLK1-201ENST00000321356 HSP90AB2PQ58FF8 381 aa10.74□□□□□ -0.69
CLK1-201ENST00000321356 OSBPL3Q9H4L5 887 aa10.74□□□□□ -0.69
CLK1-201ENST00000321356 AK9Q5TCS8 1911 aa10.74□□□□□ -0.69
CLK1-201ENST00000321356 RIMS1Q86UR5 1692 aaKnown RBP10.74□□□□□ -0.69
CLK1-201ENST00000321356 GOLGA6L22H0YM25 854 aa10.74□□□□□ -0.69
CLK1-201ENST00000321356 KLHL40Q2TBA0 621 aa10.74□□□□□ -0.69
CLK1-201ENST00000321356 FAM208AQ9UK61 1670 aaKnown RBP10.74□□□□□ -0.69
CLK1-201ENST00000321356 SMARCA5O60264 1052 aaPredicted RBP10.73□□□□□ -0.69
CLK1-201ENST00000321356 SLC4A2P04920 1241 aa10.73□□□□□ -0.69
CLK1-201ENST00000321356 NUCB2P80303 420 aa10.73□□□□□ -0.69
CLK1-201ENST00000321356 CASC1Q6TDU7 716 aa10.73□□□□□ -0.69
CLK1-201ENST00000321356 XRN1Q8IZH2 1706 aaKnown RBP10.73□□□□□ -0.69
CLK1-201ENST00000321356 MAP3K19Q56UN5 1328 aa10.72□□□□□ -0.69
CLK1-201ENST00000321356 TTC21AQ8NDW8 1320 aa10.72□□□□□ -0.69
CLK1-201ENST00000321356 HMMRO75330 724 aa10.72□□□□□ -0.69
CLK1-201ENST00000321356 PTPRUQ92729 1446 aa10.72□□□□□ -0.69
CLK1-201ENST00000321356 SBNO1A3KN83 1393 aa10.72□□□□□ -0.69
CLK1-201ENST00000321356 FLT4P35916 1363 aa10.72□□□□□ -0.69
CLK1-201ENST00000321356 SALL3Q9BXA9 1300 aa10.72□□□□□ -0.69
CLK1-201ENST00000321356 KIF13AQ9H1H9 1805 aa10.72□□□□□ -0.69
CLK1-201ENST00000321356 REC8O95072 547 aa10.72□□□□□ -0.69
CLK1-201ENST00000321356 CCT4P50991 539 aaKnown RBP10.72□□□□□ -0.69
CLK1-201ENST00000321356 ESF1Q9H501 851 aaKnown RBP10.72□□□□□ -0.69
CLK1-201ENST00000321356 CWC22Q9HCG8 908 aaKnown RBP10.72□□□□□ -0.69
CLK1-201ENST00000321356 CACNA1FO60840 1977 aa10.72□□□□□ -0.69
CLK1-201ENST00000321356 IGSF1Q8N6C5 1336 aa10.71□□□□□ -0.69
CLK1-201ENST00000321356 MTHFSDQ2M296 383 aaKnown RBP10.71□□□□□ -0.69
CLK1-201ENST00000321356 G2E3Q7L622 706 aa10.71□□□□□ -0.69
CLK1-201ENST00000321356 CEP170BQ9Y4F5 1589 aaPredicted RBP10.71□□□□□ -0.7
CLK1-201ENST00000321356 ERBB4Q15303 1308 aa10.71□□□□□ -0.7
CLK1-201ENST00000321356 PIK3C2AO00443 1686 aa10.7□□□□□ -0.7
CLK1-201ENST00000321356 ESPNB1AK53 854 aa10.7□□□□□ -0.7
CLK1-201ENST00000321356 ERC2O15083 957 aa10.7□□□□□ -0.7
CLK1-201ENST00000321356 ST18O60284 1047 aa10.7□□□□□ -0.7
CLK1-201ENST00000321356 PDE1AP54750 535 aa10.7□□□□□ -0.7
CLK1-201ENST00000321356 USP54Q70EL1 1684 aa10.7□□□□□ -0.7
CLK1-201ENST00000321356 FOXO3O43524 673 aa10.7□□□□□ -0.7
CLK1-201ENST00000321356 PPP1R9BQ96SB3 815 aa10.7□□□□□ -0.7
CLK1-201ENST00000321356 LMBRD1Q9NUN5 540 aa10.7□□□□□ -0.7
CLK1-201ENST00000321356 TSPYL4Q9UJ04 414 aa10.7□□□□□ -0.7
CLK1-201ENST00000321356 DDX49Q9Y6V7 483 aaKnown RBP10.7□□□□□ -0.7
CLK1-201ENST00000321356 MARF1Q9Y4F3 1742 aaKnown RBP10.69□□□□□ -0.7
CLK1-201ENST00000321356 HTATSF1O43719 755 aaKnown RBP10.69□□□□□ -0.7
CLK1-201ENST00000321356 LTKP29376 864 aa10.69□□□□□ -0.7
CLK1-201ENST00000321356 ZNF445P59923 1031 aa10.69□□□□□ -0.7
CLK1-201ENST00000321356 MIS18AQ9NYP9 233 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms