RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 ADGBQ8N7X0 1667 aa13.39□□□□□ -0.27
TOP3A-201ENST00000321105 GNL2Q13823 731 aaKnown RBP13.39□□□□□ -0.27
TOP3A-201ENST00000321105 ZKSCAN1P17029 563 aaPredicted RBP13.39□□□□□ -0.27
TOP3A-201ENST00000321105 STK11IPQ8N1F8 1099 aa13.39□□□□□ -0.27
TOP3A-201ENST00000321105 MRPL50Q8N5N7 158 aaKnown RBP13.39□□□□□ -0.27
TOP3A-201ENST00000321105 BCORL1Q5H9F3 1711 aa13.39□□□□□ -0.27
TOP3A-201ENST00000321105 AACSQ86V21 672 aa13.39□□□□□ -0.27
TOP3A-201ENST00000321105 RPAP2Q8IXW5 612 aaPredicted RBP13.39□□□□□ -0.27
TOP3A-201ENST00000321105 ERVK-7P63135 1459 aa13.39□□□□□ -0.27
TOP3A-201ENST00000321105 CCDC8Q9H0W5 538 aaPredicted RBP13.38□□□□□ -0.27
TOP3A-201ENST00000321105 CHPF2Q9P2E5 772 aa13.38□□□□□ -0.27
TOP3A-201ENST00000321105 WASHC4Q2M389 1173 aa13.38□□□□□ -0.27
TOP3A-201ENST00000321105 OTUD7AQ8TE49 926 aaPredicted RBP13.38□□□□□ -0.27
TOP3A-201ENST00000321105 PHAXQ9H814 394 aaKnown RBP13.38□□□□□ -0.27
TOP3A-201ENST00000321105 DTNBO60941 627 aa13.37□□□□□ -0.27
TOP3A-201ENST00000321105 RNF214Q8ND24 703 aa13.37□□□□□ -0.27
TOP3A-201ENST00000321105 EIF2AK4Q9P2K8 1649 aaKnown RBP13.37□□□□□ -0.27
TOP3A-201ENST00000321105 MPNDQ8N594 471 aa13.37□□□□□ -0.27
TOP3A-201ENST00000321105 RNF123Q5XPI4 1314 aa13.37□□□□□ -0.27
TOP3A-201ENST00000321105 PREX2Q70Z35 1606 aa13.37□□□□□ -0.27
TOP3A-201ENST00000321105 GCP02774 474 aa13.37□□□□□ -0.27
TOP3A-201ENST00000321105 TBC1D9Q6ZT07 1266 aa13.37□□□□□ -0.27
TOP3A-201ENST00000321105 TRAK2O60296 914 aa13.36□□□□□ -0.27
TOP3A-201ENST00000321105 ZBTB3Q9H5J0 574 aa13.36□□□□□ -0.27
TOP3A-201ENST00000321105 LGR6Q9HBX8 967 aa13.36□□□□□ -0.27
TOP3A-201ENST00000321105 SPG7Q9UQ90 795 aa13.36□□□□□ -0.27
TOP3A-201ENST00000321105 MYD88Q99836 296 aa13.36□□□□□ -0.27
TOP3A-201ENST00000321105 NINLQ9Y2I6 1382 aa13.36□□□□□ -0.27
TOP3A-201ENST00000321105 ERC2O15083 957 aa13.36□□□□□ -0.27
TOP3A-201ENST00000321105 STK3Q13188 491 aa13.36□□□□□ -0.27
TOP3A-201ENST00000321105 RUFY2Q8WXA3 655 aa13.36□□□□□ -0.27
TOP3A-201ENST00000321105 BOLA2Q9H3K6 86 aa13.36□□□□□ -0.27
TOP3A-201ENST00000321105 ZBTB40Q9NUA8 1239 aa13.36□□□□□ -0.27
TOP3A-201ENST00000321105 TSPOAP1O95153 1857 aa13.36□□□□□ -0.27
TOP3A-201ENST00000321105 DDX11L8A8MPP1 907 aa13.35□□□□□ -0.27
TOP3A-201ENST00000321105 PPFIA3O75145 1194 aa13.35□□□□□ -0.27
TOP3A-201ENST00000321105 DRC7Q8IY82 874 aa13.35□□□□□ -0.27
TOP3A-201ENST00000321105 AEBP2Q6ZN18 517 aaPredicted RBP13.35□□□□□ -0.27
TOP3A-201ENST00000321105 HSP90AB4PQ58FF6 505 aa13.35□□□□□ -0.27
TOP3A-201ENST00000321105 PPP1R42Q7Z4L9 355 aa13.35□□□□□ -0.27
TOP3A-201ENST00000321105 DNAAF4Q8WXU2 420 aa13.35□□□□□ -0.27
TOP3A-201ENST00000321105 FBXW7Q969H0 707 aa13.35□□□□□ -0.27
TOP3A-201ENST00000321105 MAP3K2Q9Y2U5 619 aa13.35□□□□□ -0.27
TOP3A-201ENST00000321105 CNTROBQ8N137 903 aa13.34□□□□□ -0.27
TOP3A-201ENST00000321105 CHMP4CQ96CF2 233 aa13.34□□□□□ -0.27
TOP3A-201ENST00000321105 PRPF40AO75400 957 aaKnown RBP13.34□□□□□ -0.27
TOP3A-201ENST00000321105 KDM5DQ9BY66 1539 aa13.34□□□□□ -0.27
TOP3A-201ENST00000321105 MX1P20591 662 aa13.34□□□□□ -0.27
TOP3A-201ENST00000321105 TBX22Q9Y458 520 aa13.34□□□□□ -0.27
TOP3A-201ENST00000321105 HOXC9P31274 260 aa13.34□□□□□ -0.27
TOP3A-201ENST00000321105 NFATC2IPQ8NCF5 419 aa13.34□□□□□ -0.27
TOP3A-201ENST00000321105 H3BQV1 296 aa13.33□□□□□ -0.28
TOP3A-201ENST00000321105 CWF19L2Q2TBE0 894 aaKnown RBP13.33□□□□□ -0.28
TOP3A-201ENST00000321105 IFFO2Q5TF58 517 aa13.33□□□□□ -0.28
TOP3A-201ENST00000321105 CAVIN1Q6NZI2 390 aaKnown RBP13.33□□□□□ -0.28
TOP3A-201ENST00000321105 FAM184AQ8NB25 1140 aa13.33□□□□□ -0.28
TOP3A-201ENST00000321105 PRR36Q9H6K5 1346 aa13.33□□□□□ -0.28
TOP3A-201ENST00000321105 MSNP26038 577 aaKnown RBP13.33□□□□□ -0.28
TOP3A-201ENST00000321105 FKBP4Q02790 459 aaKnown RBP eCLIP13.33□□□□□ -0.28
TOP3A-201ENST00000321105 PA2G4Q9UQ80 394 aaKnown RBP13.33□□□□□ -0.28
TOP3A-201ENST00000321105 GPTP24298 496 aa13.33□□□□□ -0.28
TOP3A-201ENST00000321105 SMC3Q9UQE7 1217 aa13.33□□□□□ -0.28
TOP3A-201ENST00000321105 IL16Q14005 1332 aa13.33□□□□□ -0.28
TOP3A-201ENST00000321105 NPC1L1Q9UHC9 1359 aa13.32□□□□□ -0.28
TOP3A-201ENST00000321105 NBPF6Q5VWK0 638 aa13.32□□□□□ -0.28
TOP3A-201ENST00000321105 UBE3BQ7Z3V4 1068 aa13.32□□□□□ -0.28
TOP3A-201ENST00000321105 NBPF4Q96M43 638 aa13.32□□□□□ -0.28
TOP3A-201ENST00000321105 PUS7Q96PZ0 661 aaKnown RBP13.32□□□□□ -0.28
TOP3A-201ENST00000321105 TMEM2Q9UHN6 1383 aa13.31□□□□□ -0.28
TOP3A-201ENST00000321105 K7ELQ4 463 aaPredicted RBP13.31□□□□□ -0.28
TOP3A-201ENST00000321105 NUCB1Q02818 461 aa13.31□□□□□ -0.28
TOP3A-201ENST00000321105 BICDL1Q6ZP65 573 aa13.31□□□□□ -0.28
TOP3A-201ENST00000321105 ZFYVE16Q7Z3T8 1539 aa13.31□□□□□ -0.28
TOP3A-201ENST00000321105 ZBTB7BO15156 539 aaPredicted RBP13.31□□□□□ -0.28
TOP3A-201ENST00000321105 KCNQ3O43525 872 aa13.31□□□□□ -0.28
TOP3A-201ENST00000321105 CEBPZQ03701 1054 aaKnown RBP13.31□□□□□ -0.28
TOP3A-201ENST00000321105 DBF4Q9UBU7 674 aaPredicted RBP13.31□□□□□ -0.28
TOP3A-201ENST00000321105 CDC42BPBQ9Y5S2 1711 aa13.3□□□□□ -0.28
TOP3A-201ENST00000321105 SDSP20132 328 aa13.3□□□□□ -0.28
TOP3A-201ENST00000321105 MTMR7Q9Y216 660 aa13.3□□□□□ -0.28
TOP3A-201ENST00000321105 FIBPO43427 364 aa13.3□□□□□ -0.28
TOP3A-201ENST00000321105 TBC1D32Q96NH3 1257 aa13.3□□□□□ -0.28
TOP3A-201ENST00000321105 BLMP54132 1417 aaPredicted RBP13.3□□□□□ -0.28
TOP3A-201ENST00000321105 A0A087WZG4 1122 aa13.3□□□□□ -0.28
TOP3A-201ENST00000321105 HDAC1Q13547 482 aaPredicted RBP13.3□□□□□ -0.28
TOP3A-201ENST00000321105 RABEP1Q15276 862 aa13.3□□□□□ -0.28
TOP3A-201ENST00000321105 KDM2BQ8NHM5 1336 aa13.3□□□□□ -0.28
TOP3A-201ENST00000321105 COPS6Q7L5N1 327 aa13.29□□□□□ -0.28
TOP3A-201ENST00000321105 ROBO2Q9HCK4 1378 aa13.29□□□□□ -0.28
TOP3A-201ENST00000321105 ZNF521Q96K83 1311 aa13.29□□□□□ -0.28
TOP3A-201ENST00000321105 FLT4P35916 1363 aa13.29□□□□□ -0.28
TOP3A-201ENST00000321105 VPS37DQ86XT2 251 aa13.29□□□□□ -0.28
TOP3A-201ENST00000321105 TCEANC2Q96MN5 208 aa13.29□□□□□ -0.28
TOP3A-201ENST00000321105 PLEKHF1Q96S99 279 aa13.29□□□□□ -0.28
TOP3A-201ENST00000321105 MCM4P33991 863 aa13.29□□□□□ -0.28
TOP3A-201ENST00000321105 SF3A1Q15459 793 aaKnown RBP13.29□□□□□ -0.28
TOP3A-201ENST00000321105 NEO1Q92859 1461 aa13.28□□□□□ -0.28
TOP3A-201ENST00000321105 AMOTQ4VCS5 1084 aa13.28□□□□□ -0.28
TOP3A-201ENST00000321105 TTC21AQ8NDW8 1320 aa13.28□□□□□ -0.28
TOP3A-201ENST00000321105 FERMT3Q86UX7 667 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms