RNA–Protein interactions for RNA: ENST00000318220.10

NBPF3-201, Transcript of NBPF member 3, humanhuman

TSL 2

Gene NBPF3, Length 4,401 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-201ENST00000318220 TTC21AQ8NDW8 1320 aa16.11■□□□□ 0.17
NBPF3-201ENST00000318220 WDHD1O75717 1129 aaPredicted RBP16.11■□□□□ 0.17
NBPF3-201ENST00000318220 TRPC5Q9UL62 973 aaPredicted RBP16.11■□□□□ 0.17
NBPF3-201ENST00000318220 NIP7Q9Y221 180 aaKnown RBP eCLIP16.11■□□□□ 0.17
NBPF3-201ENST00000318220 FOSBP53539 338 aa16.11■□□□□ 0.17
NBPF3-201ENST00000318220 CCDC24Q8N4L8 307 aa16.11■□□□□ 0.17
NBPF3-201ENST00000318220 TEX13AQ9BXU3 409 aaPredicted RBP16.11■□□□□ 0.17
NBPF3-201ENST00000318220 CCDC43Q96MW1 224 aaKnown RBP16.1■□□□□ 0.17
NBPF3-201ENST00000318220 BCAR3O75815 825 aa16.1■□□□□ 0.17
NBPF3-201ENST00000318220 IFIT5Q13325 482 aaKnown RBP16.1■□□□□ 0.17
NBPF3-201ENST00000318220 MSL1Q68DK7 614 aa16.1■□□□□ 0.17
NBPF3-201ENST00000318220 IBSPP21815 317 aaPredicted RBP16.1■□□□□ 0.17
NBPF3-201ENST00000318220 RRP1P56182 461 aaKnown RBP16.1■□□□□ 0.17
NBPF3-201ENST00000318220 ST5P78524 1137 aa16.1■□□□□ 0.17
NBPF3-201ENST00000318220 TRIM37O94972 964 aa16.09■□□□□ 0.17
NBPF3-201ENST00000318220 SNRPA1P09661 255 aaKnown RBP16.09■□□□□ 0.17
NBPF3-201ENST00000318220 CHMP4BP1P59074 171 aa16.09■□□□□ 0.17
NBPF3-201ENST00000318220 HSP90AB3PQ58FF7 597 aa16.09■□□□□ 0.17
NBPF3-201ENST00000318220 PTPRKQ15262 1439 aa16.09■□□□□ 0.17
NBPF3-201ENST00000318220 DUOX2Q9NRD8 1548 aa16.08■□□□□ 0.17
NBPF3-201ENST00000318220 H3BQV1 296 aa16.08■□□□□ 0.16
NBPF3-201ENST00000318220 IFFO2Q5TF58 517 aa16.08■□□□□ 0.16
NBPF3-201ENST00000318220 ZNF772Q68DY9 489 aaPredicted RBP16.08■□□□□ 0.16
NBPF3-201ENST00000318220 UBE3BQ7Z3V4 1068 aa16.08■□□□□ 0.16
NBPF3-201ENST00000318220 CERKQ8TCT0 537 aa16.08■□□□□ 0.16
NBPF3-201ENST00000318220 CNKSR2Q8WXI2 1034 aa16.08■□□□□ 0.16
NBPF3-201ENST00000318220 DBF4Q9UBU7 674 aaPredicted RBP16.08■□□□□ 0.16
NBPF3-201ENST00000318220 PDE4CQ08493 712 aa16.08■□□□□ 0.16
NBPF3-201ENST00000318220 CAVIN4Q5BKX8 364 aa16.08■□□□□ 0.16
NBPF3-201ENST00000318220 MAP3K19Q56UN5 1328 aa16.07■□□□□ 0.16
NBPF3-201ENST00000318220 NLRP3Q96P20 1036 aa16.07■□□□□ 0.16
NBPF3-201ENST00000318220 NSFL1CQ9UNZ2 370 aaKnown RBP16.07■□□□□ 0.16
NBPF3-201ENST00000318220 RBM19Q9Y4C8 960 aaKnown RBP16.07■□□□□ 0.16
NBPF3-201ENST00000318220 CCDC184Q52MB2 194 aa16.07■□□□□ 0.16
NBPF3-201ENST00000318220 TRAPPC3LQ5T215 181 aa16.07■□□□□ 0.16
NBPF3-201ENST00000318220 F8W031 263 aaPredicted RBP16.07■□□□□ 0.16
NBPF3-201ENST00000318220 IFIT1P09914 478 aaKnown RBP16.07■□□□□ 0.16
NBPF3-201ENST00000318220 LDHAL6AQ6ZMR3 332 aa16.07■□□□□ 0.16
NBPF3-201ENST00000318220 JDP2Q8WYK2 163 aa16.07■□□□□ 0.16
NBPF3-201ENST00000318220 PPP1R42Q7Z4L9 355 aa16.06■□□□□ 0.16
NBPF3-201ENST00000318220 IQSEC3Q9UPP2 1182 aaPredicted RBP16.06■□□□□ 0.16
NBPF3-201ENST00000318220 NEO1Q92859 1461 aa16.06■□□□□ 0.16
NBPF3-201ENST00000318220 KIF3AQ9Y496 699 aa16.06■□□□□ 0.16
NBPF3-201ENST00000318220 BRD4O60885 1362 aaPredicted RBP16.06■□□□□ 0.16
NBPF3-201ENST00000318220 ATP2B1P20020 1258 aa16.06■□□□□ 0.16
NBPF3-201ENST00000318220 ZBED9Q6R2W3 1325 aa16.06■□□□□ 0.16
NBPF3-201ENST00000318220 MAP4K4O95819 1239 aaPredicted RBP16.05■□□□□ 0.16
NBPF3-201ENST00000318220 CCT4P50991 539 aaKnown RBP16.05■□□□□ 0.16
NBPF3-201ENST00000318220 EIF4A2Q14240 407 aaKnown RBP16.05■□□□□ 0.16
NBPF3-201ENST00000318220 CRACR2BQ8N4Y2 399 aaPredicted RBP16.05■□□□□ 0.16
NBPF3-201ENST00000318220 EYA1Q99502 592 aa16.05■□□□□ 0.16
NBPF3-201ENST00000318220 AACSQ86V21 672 aa16.05■□□□□ 0.16
NBPF3-201ENST00000318220 RNF20Q5VTR2 975 aa16.04■□□□□ 0.16
NBPF3-201ENST00000318220 COPS6Q7L5N1 327 aa16.04■□□□□ 0.16
NBPF3-201ENST00000318220 PI4KAP2A4QPH2 592 aa16.04■□□□□ 0.16
NBPF3-201ENST00000318220 DZIP3Q86Y13 1208 aaKnown RBP16.04■□□□□ 0.16
NBPF3-201ENST00000318220 PI4KAP1Q8N8J0 262 aa16.04■□□□□ 0.16
NBPF3-201ENST00000318220 MPHOSPH10O00566 681 aaKnown RBP16.04■□□□□ 0.16
NBPF3-201ENST00000318220 ZNF408Q9H9D4 720 aa16.04■□□□□ 0.16
NBPF3-201ENST00000318220 SCAF11Q99590 1463 aaKnown RBP16.04■□□□□ 0.16
NBPF3-201ENST00000318220 TRIM29Q14134 588 aa16.03■□□□□ 0.16
NBPF3-201ENST00000318220 TPTE2Q6XPS3 522 aa16.03■□□□□ 0.16
NBPF3-201ENST00000318220 EXOC6BQ9Y2D4 811 aa16.03■□□□□ 0.16
NBPF3-201ENST00000318220 ZFYVE16Q7Z3T8 1539 aa16.03■□□□□ 0.16
NBPF3-201ENST00000318220 DZIP1Q86YF9 867 aaKnown RBP16.03■□□□□ 0.16
NBPF3-201ENST00000318220 GJA3Q9Y6H8 435 aa16.03■□□□□ 0.16
NBPF3-201ENST00000318220 BCS1LQ9Y276 419 aa16.03■□□□□ 0.16
NBPF3-201ENST00000318220 ST18O60284 1047 aa16.02■□□□□ 0.16
NBPF3-201ENST00000318220 ANKRD13DQ6ZTN6 518 aa16.02■□□□□ 0.16
NBPF3-201ENST00000318220 POLKQ9UBT6 870 aa16.02■□□□□ 0.16
NBPF3-201ENST00000318220 KCNQ4P56696 695 aa16.02■□□□□ 0.16
NBPF3-201ENST00000318220 CCDC34Q96HJ3 373 aa16.02■□□□□ 0.16
NBPF3-201ENST00000318220 ANKRD18BA2A2Z9 1011 aa16.02■□□□□ 0.15
NBPF3-201ENST00000318220 ZNF526Q8TF50 670 aaPredicted RBP16.02■□□□□ 0.15
NBPF3-201ENST00000318220 XAGE3Q8WTP9 111 aa16.02■□□□□ 0.15
NBPF3-201ENST00000318220 SLC3A2P08195 630 aaKnown RBP16.01■□□□□ 0.15
NBPF3-201ENST00000318220 DNAAF4Q8WXU2 420 aa16.01■□□□□ 0.15
NBPF3-201ENST00000318220 CDC5LQ99459 802 aaKnown RBP16.01■□□□□ 0.15
NBPF3-201ENST00000318220 IP6K1Q92551 441 aa16.01■□□□□ 0.15
NBPF3-201ENST00000318220 PES1O00541 588 aaKnown RBP16.01■□□□□ 0.15
NBPF3-201ENST00000318220 SLC4A8Q2Y0W8 1093 aa16.01■□□□□ 0.15
NBPF3-201ENST00000318220 OGFOD1Q8N543 542 aa16.01■□□□□ 0.15
NBPF3-201ENST00000318220 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.01■□□□□ 0.15
NBPF3-201ENST00000318220 TDO2P48775 406 aa16.01■□□□□ 0.15
NBPF3-201ENST00000318220 ZC3H12CQ9C0D7 883 aaKnown RBP16■□□□□ 0.15
NBPF3-201ENST00000318220 YTHDC2Q9H6S0 1430 aaKnown RBP16■□□□□ 0.15
NBPF3-201ENST00000318220 RIMBP2O15034 1052 aa16■□□□□ 0.15
NBPF3-201ENST00000318220 REC8O95072 547 aa16■□□□□ 0.15
NBPF3-201ENST00000318220 HOXC9P31274 260 aa16■□□□□ 0.15
NBPF3-201ENST00000318220 HYPKQ9NX55 129 aa16■□□□□ 0.15
NBPF3-201ENST00000318220 ATF7IPQ6VMQ6 1270 aa16■□□□□ 0.15
NBPF3-201ENST00000318220 PIBF1Q8WXW3 757 aa16■□□□□ 0.15
NBPF3-201ENST00000318220 ATF5Q9Y2D1 282 aaPredicted RBP16■□□□□ 0.15
NBPF3-201ENST00000318220 MAP3K2Q9Y2U5 619 aa16■□□□□ 0.15
NBPF3-201ENST00000318220 CDCA7Q9BWT1 371 aaPredicted RBP15.99■□□□□ 0.15
NBPF3-201ENST00000318220 NACAP1Q9BZK3 213 aa15.99■□□□□ 0.15
NBPF3-201ENST00000318220 USP5P45974 858 aa15.99■□□□□ 0.15
NBPF3-201ENST00000318220 ERC1Q8IUD2 1116 aa15.99■□□□□ 0.15
NBPF3-201ENST00000318220 SNRKQ9NRH2 765 aa15.99■□□□□ 0.15
NBPF3-201ENST00000318220 NPHP4O75161 1426 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms