RNA–Protein interactions for RNA: ENST00000317668.8

PROM2-202, Transcript of prominin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PROM2, Length 3,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2-202ENST00000317668 A0A1W2PP64 1363 aa12.82□□□□□ -0.36
PROM2-202ENST00000317668 PRPF40AO75400 957 aaKnown RBP12.82□□□□□ -0.36
PROM2-202ENST00000317668 NEK4P51957 841 aa12.82□□□□□ -0.36
PROM2-202ENST00000317668 AAMPQ13685 434 aa12.82□□□□□ -0.36
PROM2-202ENST00000317668 ABCA9Q8IUA7 1624 aa12.82□□□□□ -0.36
PROM2-202ENST00000317668 GOLGA6L4A6NEF3 574 aa12.82□□□□□ -0.36
PROM2-202ENST00000317668 NUCB1Q02818 461 aa12.82□□□□□ -0.36
PROM2-202ENST00000317668 TRIM35Q9UPQ4 493 aa12.82□□□□□ -0.36
PROM2-202ENST00000317668 NPC1L1Q9UHC9 1359 aa12.82□□□□□ -0.36
PROM2-202ENST00000317668 RAB3GAP1Q15042 981 aa12.82□□□□□ -0.36
PROM2-202ENST00000317668 MPRIPQ6WCQ1 1025 aa12.82□□□□□ -0.36
PROM2-202ENST00000317668 POLKQ9UBT6 870 aa12.82□□□□□ -0.36
PROM2-202ENST00000317668 ST18O60284 1047 aa12.81□□□□□ -0.36
PROM2-202ENST00000317668 TTC5Q8N0Z6 440 aa12.81□□□□□ -0.36
PROM2-202ENST00000317668 C8orf58Q8NAV2 365 aa12.81□□□□□ -0.36
PROM2-202ENST00000317668 ZNF335Q9H4Z2 1342 aaPredicted RBP12.81□□□□□ -0.36
PROM2-202ENST00000317668 FAM177BA6PVY3 158 aa12.81□□□□□ -0.36
PROM2-202ENST00000317668 PTCD1O75127 700 aaKnown RBP12.81□□□□□ -0.36
PROM2-202ENST00000317668 NFE2L2Q16236 605 aa12.81□□□□□ -0.36
PROM2-202ENST00000317668 UPF3BQ9BZI7 483 aaKnown RBP12.81□□□□□ -0.36
PROM2-202ENST00000317668 KDM4AO75164 1064 aa12.81□□□□□ -0.36
PROM2-202ENST00000317668 SKOR2Q2VWA4 1001 aaPredicted RBP12.81□□□□□ -0.36
PROM2-202ENST00000317668 BAG4O95429 457 aaKnown RBP12.8□□□□□ -0.36
PROM2-202ENST00000317668 CCDC27Q2M243 656 aa12.8□□□□□ -0.36
PROM2-202ENST00000317668 SIL1Q9H173 461 aa12.8□□□□□ -0.36
PROM2-202ENST00000317668 MBIPQ9NS73 344 aa12.8□□□□□ -0.36
PROM2-202ENST00000317668 FCHSD2O94868 740 aa12.8□□□□□ -0.36
PROM2-202ENST00000317668 NGLY1Q96IV0 654 aa12.8□□□□□ -0.36
PROM2-202ENST00000317668 MADDQ8WXG6 1647 aa12.79□□□□□ -0.36
PROM2-202ENST00000317668 SYNMO15061 1565 aa12.79□□□□□ -0.36
PROM2-202ENST00000317668 CLTCL1P53675 1640 aa12.79□□□□□ -0.36
PROM2-202ENST00000317668 MSH6P52701 1360 aa12.79□□□□□ -0.36
PROM2-202ENST00000317668 ABCC3O15438 1527 aa12.78□□□□□ -0.36
PROM2-202ENST00000317668 RBM25P49756 843 aaKnown RBP12.78□□□□□ -0.36
PROM2-202ENST00000317668 NUTM1Q86Y26 1132 aa12.78□□□□□ -0.36
PROM2-202ENST00000317668 FBXW7Q969H0 707 aa12.78□□□□□ -0.36
PROM2-202ENST00000317668 ZSCAN30Q86W11 494 aa12.78□□□□□ -0.36
PROM2-202ENST00000317668 JARID2Q92833 1246 aaPredicted RBP12.78□□□□□ -0.36
PROM2-202ENST00000317668 LAMC1P11047 1609 aa12.78□□□□□ -0.36
PROM2-202ENST00000317668 ROBO2Q9HCK4 1378 aa12.78□□□□□ -0.36
PROM2-202ENST00000317668 ZGPATQ8N5A5 531 aaKnown RBP12.78□□□□□ -0.36
PROM2-202ENST00000317668 OTUD7AQ8TE49 926 aaPredicted RBP12.78□□□□□ -0.36
PROM2-202ENST00000317668 PTPRTO14522 1441 aa12.77□□□□□ -0.36
PROM2-202ENST00000317668 CDC45O75419 566 aa12.77□□□□□ -0.36
PROM2-202ENST00000317668 TATP17735 454 aaPredicted RBP12.77□□□□□ -0.36
PROM2-202ENST00000317668 CCDC173Q0VFZ6 552 aa12.77□□□□□ -0.36
PROM2-202ENST00000317668 HDGFL1Q5TGJ6 251 aa12.77□□□□□ -0.36
PROM2-202ENST00000317668 PHF23Q9BUL5 403 aaPredicted RBP12.77□□□□□ -0.36
PROM2-202ENST00000317668 GCP02774 474 aa12.77□□□□□ -0.37
PROM2-202ENST00000317668 KIF2CQ99661 725 aa12.77□□□□□ -0.37
PROM2-202ENST00000317668 TRPM2O94759 1503 aa12.77□□□□□ -0.37
PROM2-202ENST00000317668 UBTFL1P0CB47 393 aaPredicted RBP12.77□□□□□ -0.37
PROM2-202ENST00000317668 SNX21Q969T3 373 aa12.76□□□□□ -0.37
PROM2-202ENST00000317668 TULP1O00294 542 aaPredicted RBP12.76□□□□□ -0.37
PROM2-202ENST00000317668 PRIM1P49642 420 aaKnown RBP12.76□□□□□ -0.37
PROM2-202ENST00000317668 BMP2KLQ5H9B9 411 aa12.76□□□□□ -0.37
PROM2-202ENST00000317668 SYCE3A1L190 88 aa12.76□□□□□ -0.37
PROM2-202ENST00000317668 PPFIA3O75145 1194 aa12.76□□□□□ -0.37
PROM2-202ENST00000317668 MYL6BP14649 208 aa12.76□□□□□ -0.37
PROM2-202ENST00000317668 PLEKHO1Q53GL0 409 aaPredicted RBP12.76□□□□□ -0.37
PROM2-202ENST00000317668 DRC7Q8IY82 874 aa12.76□□□□□ -0.37
PROM2-202ENST00000317668 CIZ1Q9ULV3 898 aaPredicted RBP12.76□□□□□ -0.37
PROM2-202ENST00000317668 VPS37CA5D8V6 355 aaPredicted RBP12.75□□□□□ -0.37
PROM2-202ENST00000317668 HSP90B1P14625 803 aaKnown RBP12.75□□□□□ -0.37
PROM2-202ENST00000317668 MEIS3Q99687 375 aa12.75□□□□□ -0.37
PROM2-202ENST00000317668 RBSNQ9H1K0 784 aa12.75□□□□□ -0.37
PROM2-202ENST00000317668 PRDM10Q9NQV6 1147 aa12.75□□□□□ -0.37
PROM2-202ENST00000317668 ANKRD36BQ8N2N9 1353 aa12.75□□□□□ -0.37
PROM2-202ENST00000317668 MAP3K19Q56UN5 1328 aa12.75□□□□□ -0.37
PROM2-202ENST00000317668 KCNH5Q8NCM2 988 aa12.75□□□□□ -0.37
PROM2-202ENST00000317668 CCDC85AQ96PX6 553 aaPredicted RBP12.75□□□□□ -0.37
PROM2-202ENST00000317668 SLAIN2Q9P270 581 aa12.75□□□□□ -0.37
PROM2-202ENST00000317668 INTS3Q68E01 1043 aaKnown RBP12.75□□□□□ -0.37
PROM2-202ENST00000317668 ANKRD24Q8TF21 1146 aa12.75□□□□□ -0.37
PROM2-202ENST00000317668 DIAPH3Q9NSV4 1193 aa12.75□□□□□ -0.37
PROM2-202ENST00000317668 LMTK3Q96Q04 1460 aa12.74□□□□□ -0.37
PROM2-202ENST00000317668 GTF2E1P29083 439 aaPredicted RBP12.74□□□□□ -0.37
PROM2-202ENST00000317668 EIF4A2Q14240 407 aaKnown RBP12.74□□□□□ -0.37
PROM2-202ENST00000317668 ZSCAN23Q3MJ62 389 aa12.74□□□□□ -0.37
PROM2-202ENST00000317668 GORABQ5T7V8 394 aa12.74□□□□□ -0.37
PROM2-202ENST00000317668 C8orf37Q96NL8 207 aa12.74□□□□□ -0.37
PROM2-202ENST00000317668 PRR36Q9H6K5 1346 aa12.74□□□□□ -0.37
PROM2-202ENST00000317668 TPM2P07951 284 aa12.74□□□□□ -0.37
PROM2-202ENST00000317668 PIP4K2AP48426 406 aaPredicted RBP12.74□□□□□ -0.37
PROM2-202ENST00000317668 RNF17Q9BXT8 1623 aaKnown RBP12.74□□□□□ -0.37
PROM2-202ENST00000317668 CFAP74Q9C0B2 1584 aa12.74□□□□□ -0.37
PROM2-202ENST00000317668 GDPD2Q9HCC8 539 aa12.74□□□□□ -0.37
PROM2-202ENST00000317668 TMEM94Q12767 1356 aa12.73□□□□□ -0.37
PROM2-202ENST00000317668 REC8O95072 547 aa12.73□□□□□ -0.37
PROM2-202ENST00000317668 SPHKAPQ2M3C7 1700 aa12.73□□□□□ -0.37
PROM2-202ENST00000317668 KDM5AP29375 1690 aaKnown RBP12.73□□□□□ -0.37
PROM2-202ENST00000317668 UQCRHLA0A096LP55 91 aa12.73□□□□□ -0.37
PROM2-202ENST00000317668 ZBTB7BO15156 539 aaPredicted RBP12.73□□□□□ -0.37
PROM2-202ENST00000317668 UQCRHP07919 91 aa12.73□□□□□ -0.37
PROM2-202ENST00000317668 KLHL40Q2TBA0 621 aa12.73□□□□□ -0.37
PROM2-202ENST00000317668 SIRT2Q8IXJ6 389 aa12.73□□□□□ -0.37
PROM2-202ENST00000317668 DIP2BQ9P265 1576 aa12.73□□□□□ -0.37
PROM2-202ENST00000317668 IQGAP1P46940 1657 aa12.72□□□□□ -0.37
PROM2-202ENST00000317668 IFIT2P09913 472 aaKnown RBP12.72□□□□□ -0.37
PROM2-202ENST00000317668 GSPT1P15170 499 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms