RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 DUOX2Q9NRD8 1548 aa4.47□□□□□ -1.69
GEN1-201ENST00000317402 PPARDQ03181 441 aa4.47□□□□□ -1.69
GEN1-201ENST00000317402 FBXO3Q9UK99 471 aa4.47□□□□□ -1.69
GEN1-201ENST00000317402 KNSTRNQ9Y448 316 aa4.47□□□□□ -1.69
GEN1-201ENST00000317402 FAM43AQ8N2R8 423 aa4.47□□□□□ -1.69
GEN1-201ENST00000317402 CABLES1Q8TDN4 633 aa4.47□□□□□ -1.69
GEN1-201ENST00000317402 GOLGA6L3A6NEY3 463 aa4.46□□□□□ -1.69
GEN1-201ENST00000317402 SETQ01105 290 aaPredicted RBP4.46□□□□□ -1.69
GEN1-201ENST00000317402 TAF3Q5VWG9 929 aa4.46□□□□□ -1.69
GEN1-201ENST00000317402 ARHGAP5Q13017 1502 aa4.46□□□□□ -1.69
GEN1-201ENST00000317402 RPRD2Q5VT52 1461 aaKnown RBP4.46□□□□□ -1.69
GEN1-201ENST00000317402 MAP7D2Q96T17 732 aa4.46□□□□□ -1.7
GEN1-201ENST00000317402 IDI1Q13907 227 aa4.46□□□□□ -1.7
GEN1-201ENST00000317402 UNC5CLQ8IV45 518 aa4.46□□□□□ -1.7
GEN1-201ENST00000317402 MYO16Q9Y6X6 1858 aa4.46□□□□□ -1.7
GEN1-201ENST00000317402 TPM2P07951 284 aa4.46□□□□□ -1.7
GEN1-201ENST00000317402 GOLGA6L1Q8N7Z2 621 aa4.46□□□□□ -1.7
GEN1-201ENST00000317402 TRIM35Q9UPQ4 493 aa4.46□□□□□ -1.7
GEN1-201ENST00000317402 ARFGEF3Q5TH69 2177 aa4.46□□□□□ -1.7
GEN1-201ENST00000317402 RTEL1-TNFRSF6BF6WH68 1400 aa4.46□□□□□ -1.7
GEN1-201ENST00000317402 ZRSR1Q15695 479 aaKnown RBP4.46□□□□□ -1.7
GEN1-201ENST00000317402 C9orf84Q5VXU9 1444 aa4.46□□□□□ -1.7
GEN1-201ENST00000317402 LRPPRCP42704 1394 aaKnown RBP4.46□□□□□ -1.7
GEN1-201ENST00000317402 SSH1Q8WYL5 1049 aa4.46□□□□□ -1.7
GEN1-201ENST00000317402 PALD1Q9ULE6 856 aa4.46□□□□□ -1.7
GEN1-201ENST00000317402 PRDM15P57071 1507 aaPredicted RBP4.46□□□□□ -1.7
GEN1-201ENST00000317402 NKX2-3Q8TAU0 364 aa4.45□□□□□ -1.7
GEN1-201ENST00000317402 ASCC3Q8N3C0 2202 aaKnown RBP4.45□□□□□ -1.7
GEN1-201ENST00000317402 SLC4A10Q6U841 1118 aa4.45□□□□□ -1.7
GEN1-201ENST00000317402 CACNA1IQ9P0X4 2223 aa4.45□□□□□ -1.7
GEN1-201ENST00000317402 TDRD6O60522 2096 aaKnown RBP4.45□□□□□ -1.7
GEN1-201ENST00000317402 CENPFP49454 3210 aa4.45□□□□□ -1.7
GEN1-201ENST00000317402 AKAP11Q9UKA4 1901 aa4.45□□□□□ -1.7
GEN1-201ENST00000317402 SYCP2Q9BX26 1530 aa4.45□□□□□ -1.7
GEN1-201ENST00000317402 GSPT1P15170 499 aaKnown RBP4.45□□□□□ -1.7
GEN1-201ENST00000317402 TMF1P82094 1093 aa4.45□□□□□ -1.7
GEN1-201ENST00000317402 WDR81Q562E7 1941 aa4.45□□□□□ -1.7
GEN1-201ENST00000317402 RARSP54136 660 aaKnown RBP4.45□□□□□ -1.7
GEN1-201ENST00000317402 KIF2CQ99661 725 aa4.45□□□□□ -1.7
GEN1-201ENST00000317402 SYNMO15061 1565 aa4.45□□□□□ -1.7
GEN1-201ENST00000317402 EDC3Q96F86 508 aaKnown RBP4.45□□□□□ -1.7
GEN1-201ENST00000317402 TMX1Q9H3N1 280 aa4.45□□□□□ -1.7
GEN1-201ENST00000317402 CHD2O14647 1828 aaKnown RBP4.45□□□□□ -1.7
GEN1-201ENST00000317402 GADD45BO75293 160 aaPredicted RBP4.45□□□□□ -1.7
GEN1-201ENST00000317402 KLHDC4Q8TBB5 520 aa4.45□□□□□ -1.7
GEN1-201ENST00000317402 LRRC59Q96AG4 307 aaKnown RBP4.45□□□□□ -1.7
GEN1-201ENST00000317402 DEPDC5O75140 1603 aa4.45□□□□□ -1.7
GEN1-201ENST00000317402 TET1Q8NFU7 2136 aa4.45□□□□□ -1.7
GEN1-201ENST00000317402 GPIHBP1Q8IV16 184 aa4.45□□□□□ -1.7
GEN1-201ENST00000317402 ZHX1Q9UKY1 873 aaPredicted RBP4.45□□□□□ -1.7
GEN1-201ENST00000317402 KDM5AP29375 1690 aaKnown RBP4.44□□□□□ -1.7
GEN1-201ENST00000317402 GOLGA2Q08379 1002 aa4.44□□□□□ -1.7
GEN1-201ENST00000317402 LARGE1O95461 756 aa4.44□□□□□ -1.7
GEN1-201ENST00000317402 AP5Z1O43299 807 aa4.44□□□□□ -1.7
GEN1-201ENST00000317402 MS4A1P11836 297 aa4.44□□□□□ -1.7
GEN1-201ENST00000317402 TRIM27P14373 513 aa4.44□□□□□ -1.7
GEN1-201ENST00000317402 CDK19Q9BWU1 502 aa4.44□□□□□ -1.7
GEN1-201ENST00000317402 NOS1P29475 1434 aa4.44□□□□□ -1.7
GEN1-201ENST00000317402 MTERF4Q7Z6M4 381 aaKnown RBP4.44□□□□□ -1.7
GEN1-201ENST00000317402 PLCD4Q9BRC7 762 aa4.44□□□□□ -1.7
GEN1-201ENST00000317402 RNF17Q9BXT8 1623 aaKnown RBP4.44□□□□□ -1.7
GEN1-201ENST00000317402 MBD5Q9P267 1494 aa4.44□□□□□ -1.7
GEN1-201ENST00000317402 AAMPQ13685 434 aa4.44□□□□□ -1.7
GEN1-201ENST00000317402 IL1RAPL2Q9NP60 686 aa4.44□□□□□ -1.7
GEN1-201ENST00000317402 KANK1Q14678 1352 aa4.44□□□□□ -1.7
GEN1-201ENST00000317402 MYLKQ15746 1914 aa4.44□□□□□ -1.7
GEN1-201ENST00000317402 CCDC66A2RUB6 948 aa4.44□□□□□ -1.7
GEN1-201ENST00000317402 CCDC27Q2M243 656 aa4.44□□□□□ -1.7
GEN1-201ENST00000317402 HSP90AB3PQ58FF7 597 aa4.44□□□□□ -1.7
GEN1-201ENST00000317402 ANKRD45Q5TZF3 282 aa4.44□□□□□ -1.7
GEN1-201ENST00000317402 ZNF692Q9BU19 519 aaPredicted RBP4.44□□□□□ -1.7
GEN1-201ENST00000317402 ANTXR1Q9H6X2 564 aa4.43□□□□□ -1.7
GEN1-201ENST00000317402 NUTM1Q86Y26 1132 aa4.43□□□□□ -1.7
GEN1-201ENST00000317402 SPHKAPQ2M3C7 1700 aa4.43□□□□□ -1.7
GEN1-201ENST00000317402 EIF2S2P20042 333 aaKnown RBP4.43□□□□□ -1.7
GEN1-201ENST00000317402 WWC3Q9ULE0 1092 aa4.43□□□□□ -1.7
GEN1-201ENST00000317402 RALGAPBQ86X10 1494 aa4.43□□□□□ -1.7
GEN1-201ENST00000317402 CCDC144AA2RUR9 1427 aa4.43□□□□□ -1.7
GEN1-201ENST00000317402 YEATS2Q9ULM3 1422 aa4.43□□□□□ -1.7
GEN1-201ENST00000317402 PHF3Q92576 2039 aaKnown RBP4.43□□□□□ -1.7
GEN1-201ENST00000317402 MEX3CQ5U5Q3 659 aaKnown RBP4.43□□□□□ -1.7
GEN1-201ENST00000317402 CCDC85AQ96PX6 553 aaPredicted RBP4.43□□□□□ -1.7
GEN1-201ENST00000317402 ABCC10Q5T3U5 1492 aa4.43□□□□□ -1.7
GEN1-201ENST00000317402 CDC42BPBQ9Y5S2 1711 aa4.43□□□□□ -1.7
GEN1-201ENST00000317402 KDM5CP41229 1560 aa4.43□□□□□ -1.7
GEN1-201ENST00000317402 KCNQ4P56696 695 aa4.43□□□□□ -1.7
GEN1-201ENST00000317402 ABCA9Q8IUA7 1624 aa4.43□□□□□ -1.7
GEN1-201ENST00000317402 MROH1Q8NDA8 1641 aa4.43□□□□□ -1.7
GEN1-201ENST00000317402 HSPA2P54652 639 aa4.43□□□□□ -1.7
GEN1-201ENST00000317402 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.43□□□□□ -1.7
GEN1-201ENST00000317402 PSMD1Q99460 953 aa4.43□□□□□ -1.7
GEN1-201ENST00000317402 FAM193AP78312 1265 aa4.42□□□□□ -1.7
GEN1-201ENST00000317402 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.42□□□□□ -1.7
GEN1-201ENST00000317402 ZNF521Q96K83 1311 aa4.42□□□□□ -1.7
GEN1-201ENST00000317402 PARD3Q8TEW0 1356 aa4.42□□□□□ -1.7
GEN1-201ENST00000317402 CNPY4Q8N129 248 aa4.42□□□□□ -1.7
GEN1-201ENST00000317402 CCDC34Q96HJ3 373 aa4.42□□□□□ -1.7
GEN1-201ENST00000317402 ZNF330Q9Y3S2 320 aaPredicted RBP4.42□□□□□ -1.7
GEN1-201ENST00000317402 CD109Q6YHK3 1445 aa4.42□□□□□ -1.7
GEN1-201ENST00000317402 PCNX2A6NKB5 2137 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms