RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 NUTM2GQ5VZR2 741 aa18.74■□□□□ 0.59
CHFR-202ENST00000315585 HOXC9P31274 260 aa18.74■□□□□ 0.59
CHFR-202ENST00000315585 MRPL50Q8N5N7 158 aaKnown RBP18.74■□□□□ 0.59
CHFR-202ENST00000315585 C1orf167Q5SNV9 1468 aa18.74■□□□□ 0.59
CHFR-202ENST00000315585 GSE1Q14687 1217 aa18.73■□□□□ 0.59
CHFR-202ENST00000315585 KDRP35968 1356 aa18.73■□□□□ 0.59
CHFR-202ENST00000315585 IGSF1Q8N6C5 1336 aa18.73■□□□□ 0.59
CHFR-202ENST00000315585 NUCB1Q02818 461 aa18.73■□□□□ 0.59
CHFR-202ENST00000315585 TWISTNBQ3B726 338 aaPredicted RBP18.73■□□□□ 0.59
CHFR-202ENST00000315585 AEBP1Q8IUX7 1158 aa18.73■□□□□ 0.59
CHFR-202ENST00000315585 ORAI2Q96SN7 254 aa18.73■□□□□ 0.59
CHFR-202ENST00000315585 TMEM94Q12767 1356 aa18.73■□□□□ 0.59
CHFR-202ENST00000315585 MBIPQ9NS73 344 aa18.72■□□□□ 0.59
CHFR-202ENST00000315585 DLG5Q8TDM6 1919 aa18.72■□□□□ 0.59
CHFR-202ENST00000315585 ZBTB7BO15156 539 aaPredicted RBP18.71■□□□□ 0.59
CHFR-202ENST00000315585 FOXO3O43524 673 aa18.71■□□□□ 0.59
CHFR-202ENST00000315585 CADPS2Q86UW7 1296 aa18.71■□□□□ 0.59
CHFR-202ENST00000315585 HSPA2P54652 639 aa18.7■□□□□ 0.58
CHFR-202ENST00000315585 CHD1LQ86WJ1 897 aa18.7■□□□□ 0.58
CHFR-202ENST00000315585 C22orf23Q9BZE7 217 aa18.7■□□□□ 0.58
CHFR-202ENST00000315585 KRT28Q7Z3Y7 464 aa18.69■□□□□ 0.58
CHFR-202ENST00000315585 GAS2L2Q8NHY3 880 aa18.69■□□□□ 0.58
CHFR-202ENST00000315585 IP6K1Q92551 441 aa18.69■□□□□ 0.58
CHFR-202ENST00000315585 EYA1Q99502 592 aa18.69■□□□□ 0.58
CHFR-202ENST00000315585 NFAT5O94916 1531 aa18.69■□□□□ 0.58
CHFR-202ENST00000315585 KDM4FA0A1W2PPD8 638 aa18.69■□□□□ 0.58
CHFR-202ENST00000315585 ABCC4O15439 1325 aa18.68■□□□□ 0.58
CHFR-202ENST00000315585 MSH6P52701 1360 aa18.68■□□□□ 0.58
CHFR-202ENST00000315585 LTN1O94822 1766 aa18.68■□□□□ 0.58
CHFR-202ENST00000315585 LMTK3Q96Q04 1460 aa18.67■□□□□ 0.58
CHFR-202ENST00000315585 MST1RQ04912 1400 aa18.67■□□□□ 0.58
CHFR-202ENST00000315585 STRCP1A6NGW2 1772 aa18.67■□□□□ 0.58
CHFR-202ENST00000315585 PHRF1Q9P1Y6 1649 aaKnown RBP18.67■□□□□ 0.58
CHFR-202ENST00000315585 RTF1Q92541 710 aaKnown RBP18.66■□□□□ 0.58
CHFR-202ENST00000315585 THUMPD2Q9BTF0 503 aaKnown RBP18.66■□□□□ 0.58
CHFR-202ENST00000315585 SLIT3O75094 1523 aa18.66■□□□□ 0.58
CHFR-202ENST00000315585 HTATSF1O43719 755 aaKnown RBP18.66■□□□□ 0.58
CHFR-202ENST00000315585 BMP2KLQ5H9B9 411 aa18.66■□□□□ 0.58
CHFR-202ENST00000315585 TRPM3Q9HCF6 1732 aaPredicted RBP18.66■□□□□ 0.58
CHFR-202ENST00000315585 TSPYL6Q8N831 410 aa18.65■□□□□ 0.58
CHFR-202ENST00000315585 KIAA0232Q92628 1395 aa18.64■□□□□ 0.58
CHFR-202ENST00000315585 MFAP1P55081 439 aaKnown RBP18.64■□□□□ 0.57
CHFR-202ENST00000315585 FAM83GA6ND36 823 aa18.63■□□□□ 0.57
CHFR-202ENST00000315585 FRAT2O75474 233 aaPredicted RBP18.63■□□□□ 0.57
CHFR-202ENST00000315585 GCP02774 474 aa18.63■□□□□ 0.57
CHFR-202ENST00000315585 LMOD2Q6P5Q4 547 aa18.63■□□□□ 0.57
CHFR-202ENST00000315585 TBC1D2Q9BYX2 928 aa18.63■□□□□ 0.57
CHFR-202ENST00000315585 NPHP3Q7Z494 1330 aa18.62■□□□□ 0.57
CHFR-202ENST00000315585 MTHFSDQ2M296 383 aaKnown RBP18.62■□□□□ 0.57
CHFR-202ENST00000315585 ANKRD45Q5TZF3 282 aa18.62■□□□□ 0.57
CHFR-202ENST00000315585 C8orf58Q8NAV2 365 aa18.62■□□□□ 0.57
CHFR-202ENST00000315585 LNPKQ9C0E8 428 aa18.62■□□□□ 0.57
CHFR-202ENST00000315585 ELL2O00472 640 aaPredicted RBP18.62■□□□□ 0.57
CHFR-202ENST00000315585 CHL1O00533 1208 aa18.62■□□□□ 0.57
CHFR-202ENST00000315585 XPCQ01831 940 aaPredicted RBP18.62■□□□□ 0.57
CHFR-202ENST00000315585 PTPRCP08575 1304 aa18.61■□□□□ 0.57
CHFR-202ENST00000315585 DCTN1Q14203 1278 aa18.61■□□□□ 0.57
CHFR-202ENST00000315585 LTV1Q96GA3 475 aaPredicted RBP18.61■□□□□ 0.57
CHFR-202ENST00000315585 ARHGEF25Q86VW2 580 aa18.61■□□□□ 0.57
CHFR-202ENST00000315585 HSCBQ8IWL3 235 aa18.61■□□□□ 0.57
CHFR-202ENST00000315585 STRCQ7RTU9 1775 aa18.6■□□□□ 0.57
CHFR-202ENST00000315585 RBM25P49756 843 aaKnown RBP18.6■□□□□ 0.57
CHFR-202ENST00000315585 INTS3Q68E01 1043 aaKnown RBP18.6■□□□□ 0.57
CHFR-202ENST00000315585 ANTXR1Q9H6X2 564 aa18.6■□□□□ 0.57
CHFR-202ENST00000315585 MCM10Q7L590 875 aa18.59■□□□□ 0.57
CHFR-202ENST00000315585 SLKQ9H2G2 1235 aaPredicted RBP18.59■□□□□ 0.57
CHFR-202ENST00000315585 ALS2Q96Q42 1657 aa18.59■□□□□ 0.57
CHFR-202ENST00000315585 GNAT3A8MTJ3 354 aa18.58■□□□□ 0.57
CHFR-202ENST00000315585 RPAP2Q8IXW5 612 aaPredicted RBP18.58■□□□□ 0.57
CHFR-202ENST00000315585 ZBTB7CA1YPR0 619 aa18.58■□□□□ 0.56
CHFR-202ENST00000315585 CRB1P82279 1406 aa18.57■□□□□ 0.56
CHFR-202ENST00000315585 SNX21Q969T3 373 aa18.57■□□□□ 0.56
CHFR-202ENST00000315585 CHMP5Q9NZZ3 219 aa18.57■□□□□ 0.56
CHFR-202ENST00000315585 MAP3K5Q99683 1374 aa18.56■□□□□ 0.56
CHFR-202ENST00000315585 BABAM1Q9NWV8 329 aa18.55■□□□□ 0.56
CHFR-202ENST00000315585 DCTPP1Q9H773 170 aa18.54■□□□□ 0.56
CHFR-202ENST00000315585 TNS3Q68CZ2 1445 aa18.54■□□□□ 0.56
CHFR-202ENST00000315585 NBPF6Q5VWK0 638 aa18.53■□□□□ 0.56
CHFR-202ENST00000315585 NBPF4Q96M43 638 aa18.53■□□□□ 0.56
CHFR-202ENST00000315585 XIRP1Q702N8 1843 aaKnown RBP18.53■□□□□ 0.56
CHFR-202ENST00000315585 C1orf115Q9H7X2 142 aa18.53■□□□□ 0.56
CHFR-202ENST00000315585 TSPYL4Q9UJ04 414 aa18.53■□□□□ 0.56
CHFR-202ENST00000315585 SOS1Q07889 1333 aaPredicted RBP18.53■□□□□ 0.56
CHFR-202ENST00000315585 AMOTQ4VCS5 1084 aa18.52■□□□□ 0.56
CHFR-202ENST00000315585 PLEKHO1Q53GL0 409 aaPredicted RBP18.52■□□□□ 0.55
CHFR-202ENST00000315585 SIRT2Q8IXJ6 389 aa18.52■□□□□ 0.55
CHFR-202ENST00000315585 ANKRD44Q8N8A2 993 aa18.52■□□□□ 0.55
CHFR-202ENST00000315585 ANKRD24Q8TF21 1146 aa18.52■□□□□ 0.55
CHFR-202ENST00000315585 LRRC37A3O60309 1634 aa18.51■□□□□ 0.55
CHFR-202ENST00000315585 HMMRO75330 724 aa18.51■□□□□ 0.55
CHFR-202ENST00000315585 CDC45O75419 566 aa18.51■□□□□ 0.55
CHFR-202ENST00000315585 USHBP1Q8N6Y0 703 aa18.51■□□□□ 0.55
CHFR-202ENST00000315585 NCAPD2Q15021 1401 aa18.51■□□□□ 0.55
CHFR-202ENST00000315585 PXDNQ92626 1479 aa18.5■□□□□ 0.55
CHFR-202ENST00000315585 MED1Q15648 1581 aaPredicted RBP18.5■□□□□ 0.55
CHFR-202ENST00000315585 ABCC6O95255 1503 aa18.5■□□□□ 0.55
CHFR-202ENST00000315585 SPATA31A3Q5VYP0 1347 aa18.5■□□□□ 0.55
CHFR-202ENST00000315585 CCT4P50991 539 aaKnown RBP18.49■□□□□ 0.55
CHFR-202ENST00000315585 CASC1Q6TDU7 716 aa18.49■□□□□ 0.55
CHFR-202ENST00000315585 CIZ1Q9ULV3 898 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms