RNA–Protein interactions for RNA: ENST00000312521.8

NR1D2-201, Transcript of nuclear receptor subfamily 1 group D member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1D2, Length 5,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D2-201ENST00000312521 EHBP1L1Q8N3D4 1523 aa22.36■■□□□ 1.17
NR1D2-201ENST00000312521 TMPOP42166 694 aaKnown RBP22.36■■□□□ 1.17
NR1D2-201ENST00000312521 SKIDA1Q1XH10 827 aa22.35■■□□□ 1.17
NR1D2-201ENST00000312521 CCDC112Q8NEF3 446 aa22.34■■□□□ 1.17
NR1D2-201ENST00000312521 RAI14Q9P0K7 980 aa22.34■■□□□ 1.17
NR1D2-201ENST00000312521 WASF1Q92558 559 aa22.34■■□□□ 1.17
NR1D2-201ENST00000312521 GRPEL1Q9HAV7 217 aa22.34■■□□□ 1.17
NR1D2-201ENST00000312521 CCDC66A2RUB6 948 aa22.33■■□□□ 1.17
NR1D2-201ENST00000312521 GNAT3A8MTJ3 354 aa22.33■■□□□ 1.17
NR1D2-201ENST00000312521 NUP62CLQ9H1M0 184 aa22.33■■□□□ 1.17
NR1D2-201ENST00000312521 BRPF3Q9ULD4 1205 aa22.33■■□□□ 1.17
NR1D2-201ENST00000312521 SLFN5Q08AF3 891 aa22.33■■□□□ 1.17
NR1D2-201ENST00000312521 CCDC181Q5TID7 509 aa22.33■■□□□ 1.17
NR1D2-201ENST00000312521 LRP2BPQ9P2M1 347 aa22.33■■□□□ 1.17
NR1D2-201ENST00000312521 EFCAB5A4FU69 1503 aa22.33■■□□□ 1.16
NR1D2-201ENST00000312521 NUTM2BA6NNL0 878 aaPredicted RBP22.32■■□□□ 1.16
NR1D2-201ENST00000312521 NUTM2EB1AL46 878 aaPredicted RBP22.32■■□□□ 1.16
NR1D2-201ENST00000312521 NUTM2AQ8IVF1 878 aaPredicted RBP22.32■■□□□ 1.16
NR1D2-201ENST00000312521 TMEM57Q8N5G2 664 aa22.32■■□□□ 1.16
NR1D2-201ENST00000312521 DCAF8L1A6NGE4 600 aa22.32■■□□□ 1.16
NR1D2-201ENST00000312521 RBM5P52756 815 aaKnown RBP eCLIP22.32■■□□□ 1.16
NR1D2-201ENST00000312521 IGHMBP2P38935 993 aaKnown RBP22.31■■□□□ 1.16
NR1D2-201ENST00000312521 NUDT16Q96DE0 195 aaKnown RBP22.31■■□□□ 1.16
NR1D2-201ENST00000312521 SF3B2Q13435 895 aaKnown RBP22.31■■□□□ 1.16
NR1D2-201ENST00000312521 MCM4P33991 863 aa22.31■■□□□ 1.16
NR1D2-201ENST00000312521 LEKR1Q6ZMV7 388 aa22.31■■□□□ 1.16
NR1D2-201ENST00000312521 KCNH5Q8NCM2 988 aa22.31■■□□□ 1.16
NR1D2-201ENST00000312521 TSPYL1Q9H0U9 437 aa22.31■■□□□ 1.16
NR1D2-201ENST00000312521 GOLGA6L10A6NI86 522 aa22.31■■□□□ 1.16
NR1D2-201ENST00000312521 RAPGEF3O95398 923 aa22.31■■□□□ 1.16
NR1D2-201ENST00000312521 KIF1BPQ96EK5 621 aa22.31■■□□□ 1.16
NR1D2-201ENST00000312521 IDH1O75874 414 aaKnown RBP22.3■■□□□ 1.16
NR1D2-201ENST00000312521 NEFHP12036 1026 aa22.3■■□□□ 1.16
NR1D2-201ENST00000312521 SSBP05455 408 aaKnown RBP eCLIP22.3■■□□□ 1.16
NR1D2-201ENST00000312521 IMMTQ16891 758 aaKnown RBP22.3■■□□□ 1.16
NR1D2-201ENST00000312521 UPF3BQ9BZI7 483 aaKnown RBP22.3■■□□□ 1.16
NR1D2-201ENST00000312521 PPP1R1BQ9UD71 204 aaPredicted RBP22.3■■□□□ 1.16
NR1D2-201ENST00000312521 EXOC6BQ9Y2D4 811 aa22.3■■□□□ 1.16
NR1D2-201ENST00000312521 ERLIN1O75477 346 aa22.29■■□□□ 1.16
NR1D2-201ENST00000312521 STARD3NLO95772 234 aa22.29■■□□□ 1.16
NR1D2-201ENST00000312521 GLRX3O76003 335 aaKnown RBP22.29■■□□□ 1.16
NR1D2-201ENST00000312521 ZSCAN29Q8IWY8 852 aaPredicted RBP22.29■■□□□ 1.16
NR1D2-201ENST00000312521 AIDAQ96BJ3 306 aa22.29■■□□□ 1.16
NR1D2-201ENST00000312521 NSD3Q9BZ95 1437 aa22.29■■□□□ 1.16
NR1D2-201ENST00000312521 DUSP27Q5VZP5 1158 aa22.28■■□□□ 1.16
NR1D2-201ENST00000312521 SMTNL1A8MU46 457 aa22.28■■□□□ 1.16
NR1D2-201ENST00000312521 ZC3H6P61129 1189 aaKnown RBP22.28■■□□□ 1.16
NR1D2-201ENST00000312521 MPNDQ8N594 471 aa22.28■■□□□ 1.16
NR1D2-201ENST00000312521 RAB11FIP3O75154 756 aa22.27■■□□□ 1.16
NR1D2-201ENST00000312521 NUTM1Q86Y26 1132 aa22.27■■□□□ 1.16
NR1D2-201ENST00000312521 CASTP20810 708 aaKnown RBP22.26■■□□□ 1.15
NR1D2-201ENST00000312521 U3KPZ7 1027 aaPredicted RBP22.26■■□□□ 1.15
NR1D2-201ENST00000312521 AKAP2Q9Y2D5 859 aa22.26■■□□□ 1.15
NR1D2-201ENST00000312521 DAPK1P53355 1430 aa22.26■■□□□ 1.15
NR1D2-201ENST00000312521 CCDC184Q52MB2 194 aa22.26■■□□□ 1.15
NR1D2-201ENST00000312521 LARP1Q6PKG0 1096 aaKnown RBP22.26■■□□□ 1.15
NR1D2-201ENST00000312521 FAM177A1Q8N128 213 aaPredicted RBP22.26■■□□□ 1.15
NR1D2-201ENST00000312521 FILIP1Q7Z7B0 1213 aa22.25■■□□□ 1.15
NR1D2-201ENST00000312521 MX1P20591 662 aa22.25■■□□□ 1.15
NR1D2-201ENST00000312521 ZRSR2Q15696 482 aaKnown RBP22.25■■□□□ 1.15
NR1D2-201ENST00000312521 CCDC85AQ96PX6 553 aaPredicted RBP22.25■■□□□ 1.15
NR1D2-201ENST00000312521 METTL24Q5JXM2 366 aa22.25■■□□□ 1.15
NR1D2-201ENST00000312521 CEP131Q9UPN4 1083 aa22.25■■□□□ 1.15
NR1D2-201ENST00000312521 HMGB2P26583 209 aaKnown RBP22.25■■□□□ 1.15
NR1D2-201ENST00000312521 ABCF2Q9UG63 623 aa22.25■■□□□ 1.15
NR1D2-201ENST00000312521 POGZQ7Z3K3 1410 aa22.24■■□□□ 1.15
NR1D2-201ENST00000312521 MAP3K11Q16584 847 aa22.24■■□□□ 1.15
NR1D2-201ENST00000312521 DDX11Q96FC9 970 aa22.24■■□□□ 1.15
NR1D2-201ENST00000312521 ZNF76P36508 570 aa22.23■■□□□ 1.15
NR1D2-201ENST00000312521 XPCQ01831 940 aaPredicted RBP22.23■■□□□ 1.15
NR1D2-201ENST00000312521 EIF3JO75822 258 aaKnown RBP22.23■■□□□ 1.15
NR1D2-201ENST00000312521 SEPT7Q16181 437 aaKnown RBP22.23■■□□□ 1.15
NR1D2-201ENST00000312521 ALDH1L2Q3SY69 923 aa22.23■■□□□ 1.15
NR1D2-201ENST00000312521 IQCEQ6IPM2 695 aa22.23■■□□□ 1.15
NR1D2-201ENST00000312521 ANKRD18AQ8IVF6 992 aa22.22■■□□□ 1.15
NR1D2-201ENST00000312521 ZNF287Q9HBT7 754 aa22.22■■□□□ 1.15
NR1D2-201ENST00000312521 IFT140Q96RY7 1462 aa22.22■■□□□ 1.15
NR1D2-201ENST00000312521 MCM10Q7L590 875 aa22.22■■□□□ 1.15
NR1D2-201ENST00000312521 MIS18AQ9NYP9 233 aa22.22■■□□□ 1.15
NR1D2-201ENST00000312521 BICDL1Q6ZP65 573 aa22.22■■□□□ 1.15
NR1D2-201ENST00000312521 THUMPD2Q9BTF0 503 aaKnown RBP22.22■■□□□ 1.15
NR1D2-201ENST00000312521 EIF5P55010 431 aaKnown RBP22.22■■□□□ 1.15
NR1D2-201ENST00000312521 RBM10P98175 930 aaKnown RBP22.22■■□□□ 1.15
NR1D2-201ENST00000312521 ABCC11Q96J66 1382 aa22.21■■□□□ 1.15
NR1D2-201ENST00000312521 EPB41L2O43491 1005 aaKnown RBP22.2■■□□□ 1.14
NR1D2-201ENST00000312521 IFIT1P09914 478 aaKnown RBP22.2■■□□□ 1.14
NR1D2-201ENST00000312521 TAF7Q15545 349 aaPredicted RBP22.2■■□□□ 1.14
NR1D2-201ENST00000312521 TMOD2Q9NZR1 351 aa22.2■■□□□ 1.14
NR1D2-201ENST00000312521 SPINK5Q9NQ38 1064 aaPredicted RBP22.2■■□□□ 1.14
NR1D2-201ENST00000312521 SSH1Q8WYL5 1049 aa22.2■■□□□ 1.14
NR1D2-201ENST00000312521 ZNF652Q9Y2D9 606 aa22.2■■□□□ 1.14
NR1D2-201ENST00000312521 SEPT11Q9NVA2 429 aaKnown RBP22.2■■□□□ 1.14
NR1D2-201ENST00000312521 USP5P45974 858 aa22.19■■□□□ 1.14
NR1D2-201ENST00000312521 FERMT3Q86UX7 667 aa22.19■■□□□ 1.14
NR1D2-201ENST00000312521 PIBF1Q8WXW3 757 aa22.19■■□□□ 1.14
NR1D2-201ENST00000312521 PTCD1O75127 700 aaKnown RBP22.19■■□□□ 1.14
NR1D2-201ENST00000312521 CFAP100Q494V2 611 aa22.19■■□□□ 1.14
NR1D2-201ENST00000312521 PRPF40BQ6NWY9 871 aaKnown RBP22.19■■□□□ 1.14
NR1D2-201ENST00000312521 AMOTQ4VCS5 1084 aa22.19■■□□□ 1.14
NR1D2-201ENST00000312521 PRXQ9BXM0 1461 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms