RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 TCP11L2Q8N4U5 519 aa10.44□□□□□ -0.74
COL6A5-202ENST00000312481 GOLGA6L10A6NI86 522 aa10.43□□□□□ -0.74
COL6A5-202ENST00000312481 ABCC1P33527 1531 aa10.43□□□□□ -0.74
COL6A5-202ENST00000312481 TULP1O00294 542 aaPredicted RBP10.43□□□□□ -0.74
COL6A5-202ENST00000312481 KLHL40Q2TBA0 621 aa10.43□□□□□ -0.74
COL6A5-202ENST00000312481 INCENPQ9NQS7 918 aa10.43□□□□□ -0.74
COL6A5-202ENST00000312481 CGNQ9P2M7 1197 aaKnown RBP10.43□□□□□ -0.74
COL6A5-202ENST00000312481 CCDC196A0A1B0GTZ2 297 aa10.43□□□□□ -0.74
COL6A5-202ENST00000312481 ZC3H13Q5T200 1668 aaKnown RBP10.42□□□□□ -0.74
COL6A5-202ENST00000312481 TCHHQ07283 1943 aa10.42□□□□□ -0.74
COL6A5-202ENST00000312481 TRPM1Q7Z4N2 1603 aa10.42□□□□□ -0.74
COL6A5-202ENST00000312481 BMP15O95972 392 aa10.42□□□□□ -0.74
COL6A5-202ENST00000312481 DNAAF4Q8WXU2 420 aa10.42□□□□□ -0.74
COL6A5-202ENST00000312481 TARBP1Q13395 1621 aaKnown RBP10.42□□□□□ -0.74
COL6A5-202ENST00000312481 TUBB2AQ13885 445 aa10.42□□□□□ -0.74
COL6A5-202ENST00000312481 TUBB2BQ9BVA1 445 aa10.42□□□□□ -0.74
COL6A5-202ENST00000312481 FGFR1OPO95684 399 aaKnown RBP10.42□□□□□ -0.74
COL6A5-202ENST00000312481 CEP170Q5SW79 1584 aa10.41□□□□□ -0.74
COL6A5-202ENST00000312481 KANK3Q6NY19 840 aa10.41□□□□□ -0.74
COL6A5-202ENST00000312481 ZNF287Q9HBT7 754 aa10.41□□□□□ -0.74
COL6A5-202ENST00000312481 NSD3Q9BZ95 1437 aa10.41□□□□□ -0.74
COL6A5-202ENST00000312481 TRIM22Q8IYM9 498 aa10.41□□□□□ -0.74
COL6A5-202ENST00000312481 ANO2Q9NQ90 1003 aa10.41□□□□□ -0.74
COL6A5-202ENST00000312481 ADAMTS8Q9UP79 889 aa10.41□□□□□ -0.74
COL6A5-202ENST00000312481 INTS4Q96HW7 963 aaKnown RBP10.41□□□□□ -0.74
COL6A5-202ENST00000312481 DDX19AQ9NUU7 478 aaKnown RBP10.41□□□□□ -0.74
COL6A5-202ENST00000312481 TBC1D2BQ9UPU7 963 aa10.41□□□□□ -0.74
COL6A5-202ENST00000312481 V9GYY5 206 aaPredicted RBP10.41□□□□□ -0.74
COL6A5-202ENST00000312481 GLRX3O76003 335 aaKnown RBP10.41□□□□□ -0.74
COL6A5-202ENST00000312481 GOLGA6L10A0A0M3HER8 536 aa10.41□□□□□ -0.74
COL6A5-202ENST00000312481 KIF18AQ8NI77 898 aa10.4□□□□□ -0.74
COL6A5-202ENST00000312481 CLCN1P35523 988 aa10.4□□□□□ -0.74
COL6A5-202ENST00000312481 SDF4Q9BRK5 362 aa10.4□□□□□ -0.74
COL6A5-202ENST00000312481 AOX1Q06278 1338 aa10.4□□□□□ -0.74
COL6A5-202ENST00000312481 IBTKQ9P2D0 1353 aaPredicted RBP10.4□□□□□ -0.74
COL6A5-202ENST00000312481 IMMTQ16891 758 aaKnown RBP10.4□□□□□ -0.74
COL6A5-202ENST00000312481 PPP4R3BQ5MIZ7 849 aa10.4□□□□□ -0.74
COL6A5-202ENST00000312481 OSCARQ8IYS5 282 aa10.4□□□□□ -0.74
COL6A5-202ENST00000312481 RILPL2Q969X0 211 aa10.4□□□□□ -0.74
COL6A5-202ENST00000312481 SMC2O95347 1197 aa10.4□□□□□ -0.74
COL6A5-202ENST00000312481 FKBP5Q13451 457 aaPredicted RBP10.4□□□□□ -0.74
COL6A5-202ENST00000312481 ZSCAN16Q9H4T2 348 aaPredicted RBP10.4□□□□□ -0.74
COL6A5-202ENST00000312481 CCDC171Q6TFL3 1326 aa10.4□□□□□ -0.74
COL6A5-202ENST00000312481 MCTP1Q6DN14 999 aa10.4□□□□□ -0.74
COL6A5-202ENST00000312481 RTN4Q9NQC3 1192 aaKnown RBP10.4□□□□□ -0.74
COL6A5-202ENST00000312481 NEURL4Q96JN8 1562 aa10.4□□□□□ -0.74
COL6A5-202ENST00000312481 PLEKHO1Q53GL0 409 aaPredicted RBP10.4□□□□□ -0.75
COL6A5-202ENST00000312481 ANKRD18AQ8IVF6 992 aa10.4□□□□□ -0.75
COL6A5-202ENST00000312481 NUP153P49790 1475 aaKnown RBP10.4□□□□□ -0.75
COL6A5-202ENST00000312481 RNF123Q5XPI4 1314 aa10.4□□□□□ -0.75
COL6A5-202ENST00000312481 NFE2L2Q16236 605 aa10.39□□□□□ -0.75
COL6A5-202ENST00000312481 PRDM15P57071 1507 aaPredicted RBP10.39□□□□□ -0.75
COL6A5-202ENST00000312481 FANCAO15360 1455 aa10.39□□□□□ -0.75
COL6A5-202ENST00000312481 ARHGAP31Q2M1Z3 1444 aa10.39□□□□□ -0.75
COL6A5-202ENST00000312481 RTL1A6NKG5 1358 aa10.39□□□□□ -0.75
COL6A5-202ENST00000312481 AMOTQ4VCS5 1084 aa10.39□□□□□ -0.75
COL6A5-202ENST00000312481 SLC4A10Q6U841 1118 aa10.39□□□□□ -0.75
COL6A5-202ENST00000312481 TRIM5Q9C035 493 aa10.39□□□□□ -0.75
COL6A5-202ENST00000312481 GNL3LQ9NVN8 582 aaKnown RBP10.39□□□□□ -0.75
COL6A5-202ENST00000312481 U3KPZ7 1027 aaPredicted RBP10.39□□□□□ -0.75
COL6A5-202ENST00000312481 USP25Q9UHP3 1055 aa10.39□□□□□ -0.75
COL6A5-202ENST00000312481 SYCP2Q9BX26 1530 aa10.39□□□□□ -0.75
COL6A5-202ENST00000312481 MAP3K11Q16584 847 aa10.39□□□□□ -0.75
COL6A5-202ENST00000312481 NACAP1Q9BZK3 213 aa10.39□□□□□ -0.75
COL6A5-202ENST00000312481 TRAK1Q9UPV9 953 aa10.39□□□□□ -0.75
COL6A5-202ENST00000312481 PLCH2O75038 1416 aa10.39□□□□□ -0.75
COL6A5-202ENST00000312481 MTHFSP49914 203 aa10.39□□□□□ -0.75
COL6A5-202ENST00000312481 SSH2Q76I76 1423 aa10.39□□□□□ -0.75
COL6A5-202ENST00000312481 FILIP1Q7Z7B0 1213 aa10.39□□□□□ -0.75
COL6A5-202ENST00000312481 KCNH5Q8NCM2 988 aa10.38□□□□□ -0.75
COL6A5-202ENST00000312481 TBC1D32Q96NH3 1257 aa10.38□□□□□ -0.75
COL6A5-202ENST00000312481 TRPM2O94759 1503 aa10.38□□□□□ -0.75
COL6A5-202ENST00000312481 PSME1Q06323 249 aa10.38□□□□□ -0.75
COL6A5-202ENST00000312481 ATP7AQ04656 1500 aa10.38□□□□□ -0.75
COL6A5-202ENST00000312481 MYOM2P54296 1465 aa10.38□□□□□ -0.75
COL6A5-202ENST00000312481 KIF1BPQ96EK5 621 aa10.38□□□□□ -0.75
COL6A5-202ENST00000312481 TSPYL4Q9UJ04 414 aa10.38□□□□□ -0.75
COL6A5-202ENST00000312481 DEF6Q9H4E7 631 aa10.38□□□□□ -0.75
COL6A5-202ENST00000312481 KIF20AO95235 890 aa10.37□□□□□ -0.75
COL6A5-202ENST00000312481 DNAI2Q9GZS0 605 aa10.37□□□□□ -0.75
COL6A5-202ENST00000312481 SETBP1Q9Y6X0 1596 aa10.37□□□□□ -0.75
COL6A5-202ENST00000312481 TWISTNBQ3B726 338 aaPredicted RBP10.37□□□□□ -0.75
COL6A5-202ENST00000312481 LUZP1Q86V48 1076 aa10.37□□□□□ -0.75
COL6A5-202ENST00000312481 MAP2P11137 1827 aaKnown RBP10.37□□□□□ -0.75
COL6A5-202ENST00000312481 MICALCLQ6ZW33 695 aa10.37□□□□□ -0.75
COL6A5-202ENST00000312481 ANO10Q9NW15 660 aa10.37□□□□□ -0.75
COL6A5-202ENST00000312481 UBE2HP62256 183 aa10.37□□□□□ -0.75
COL6A5-202ENST00000312481 CCDC150Q8NCX0 1101 aa10.37□□□□□ -0.75
COL6A5-202ENST00000312481 STK26Q9P289 416 aa10.37□□□□□ -0.75
COL6A5-202ENST00000312481 KIAA0754O94854 1291 aa10.36□□□□□ -0.75
COL6A5-202ENST00000312481 IVLP07476 585 aa10.36□□□□□ -0.75
COL6A5-202ENST00000312481 TNMDQ9H2S6 317 aa10.36□□□□□ -0.75
COL6A5-202ENST00000312481 MAGEC2Q9UBF1 373 aaPredicted RBP10.36□□□□□ -0.75
COL6A5-202ENST00000312481 ATP10AO60312 1499 aa10.36□□□□□ -0.75
COL6A5-202ENST00000312481 SAMD9LQ8IVG5 1584 aa10.36□□□□□ -0.75
COL6A5-202ENST00000312481 TTC21AQ8NDW8 1320 aa10.36□□□□□ -0.75
COL6A5-202ENST00000312481 TMED8Q6PL24 325 aaPredicted RBP10.36□□□□□ -0.75
COL6A5-202ENST00000312481 TCEAL9Q9UHQ7 104 aa10.36□□□□□ -0.75
COL6A5-202ENST00000312481 GOLIM4O00461 696 aa10.36□□□□□ -0.75
COL6A5-202ENST00000312481 FEZ1Q99689 392 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms