RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 MSH6P52701 1360 aa31.5■■■□□ 2.63
HOXB3-201ENST00000311626 F6X3S4 739 aa31.5■■■□□ 2.63
HOXB3-201ENST00000311626 L1TD1Q5T7N2 865 aaKnown RBP31.5■■■□□ 2.63
HOXB3-201ENST00000311626 NCOA3Q9Y6Q9 1424 aa31.49■■■□□ 2.63
HOXB3-201ENST00000311626 SLC4A10Q6U841 1118 aa31.49■■■□□ 2.63
HOXB3-201ENST00000311626 G2E3Q7L622 706 aa31.49■■■□□ 2.63
HOXB3-201ENST00000311626 RGS12O14924 1447 aa31.49■■■□□ 2.63
HOXB3-201ENST00000311626 ADAMTS13Q76LX8 1427 aa31.49■■■□□ 2.63
HOXB3-201ENST00000311626 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.48■■■□□ 2.63
HOXB3-201ENST00000311626 CEP85Q6P2H3 762 aa31.48■■■□□ 2.63
HOXB3-201ENST00000311626 ANKRD44Q8N8A2 993 aa31.48■■■□□ 2.63
HOXB3-201ENST00000311626 MTHFSDQ2M296 383 aaKnown RBP31.47■■■□□ 2.63
HOXB3-201ENST00000311626 MAP3K19Q56UN5 1328 aa31.47■■■□□ 2.63
HOXB3-201ENST00000311626 GAS2L2Q8NHY3 880 aa31.47■■■□□ 2.63
HOXB3-201ENST00000311626 TTC22Q5TAA0 569 aa31.46■■■□□ 2.63
HOXB3-201ENST00000311626 PEAK1Q9H792 1746 aa31.45■■■□□ 2.62
HOXB3-201ENST00000311626 PLEKHG3A1L390 1219 aa31.45■■■□□ 2.62
HOXB3-201ENST00000311626 K7ELQ4 463 aaPredicted RBP31.45■■■□□ 2.62
HOXB3-201ENST00000311626 NUTM2GQ5VZR2 741 aa31.45■■■□□ 2.62
HOXB3-201ENST00000311626 NECTIN2Q92692 538 aa31.45■■■□□ 2.62
HOXB3-201ENST00000311626 OVOS2A0A0J9YW53 1432 aa31.44■■■□□ 2.62
HOXB3-201ENST00000311626 OVOS2Q6IE36 1432 aa31.44■■■□□ 2.62
HOXB3-201ENST00000311626 ATP10DQ9P241 1426 aa31.44■■■□□ 2.62
HOXB3-201ENST00000311626 USP6P35125 1406 aa31.44■■■□□ 2.62
HOXB3-201ENST00000311626 FSD2A1L4K1 749 aa31.43■■■□□ 2.62
HOXB3-201ENST00000311626 TSPYL4Q9UJ04 414 aa31.43■■■□□ 2.62
HOXB3-201ENST00000311626 RTL1A6NKG5 1358 aa31.42■■■□□ 2.62
HOXB3-201ENST00000311626 PTPRUQ92729 1446 aa31.41■■■□□ 2.62
HOXB3-201ENST00000311626 DDX11L8A8MPP1 907 aa31.4■■■□□ 2.62
HOXB3-201ENST00000311626 SSFA2P28290 1259 aa31.4■■■□□ 2.62
HOXB3-201ENST00000311626 AMOTL2Q9Y2J4 779 aa31.4■■■□□ 2.62
HOXB3-201ENST00000311626 RIMS1Q86UR5 1692 aaKnown RBP31.4■■■□□ 2.62
HOXB3-201ENST00000311626 NRKQ7Z2Y5 1582 aa31.4■■■□□ 2.62
HOXB3-201ENST00000311626 SDSP20132 328 aa31.4■■■□□ 2.62
HOXB3-201ENST00000311626 RAB3GAP1Q15042 981 aa31.4■■■□□ 2.62
HOXB3-201ENST00000311626 NGDNQ8NEJ9 315 aaKnown RBP31.4■■■□□ 2.62
HOXB3-201ENST00000311626 RRAGDQ9NQL2 400 aaPredicted RBP31.4■■■□□ 2.62
HOXB3-201ENST00000311626 CRB1P82279 1406 aa31.39■■■□□ 2.62
HOXB3-201ENST00000311626 FAM43AQ8N2R8 423 aa31.39■■■□□ 2.62
HOXB3-201ENST00000311626 RTF1Q92541 710 aaKnown RBP31.39■■■□□ 2.62
HOXB3-201ENST00000311626 RPAP2Q8IXW5 612 aaPredicted RBP31.39■■■□□ 2.62
HOXB3-201ENST00000311626 KIF24Q5T7B8 1368 aa31.38■■■□□ 2.61
HOXB3-201ENST00000311626 AMPHP49418 695 aa31.37■■■□□ 2.61
HOXB3-201ENST00000311626 TSHZ3Q63HK5 1081 aa31.37■■■□□ 2.61
HOXB3-201ENST00000311626 EYA1Q99502 592 aa31.37■■■□□ 2.61
HOXB3-201ENST00000311626 UBR1Q8IWV7 1749 aa31.37■■■□□ 2.61
HOXB3-201ENST00000311626 KIAA0232Q92628 1395 aa31.35■■■□□ 2.61
HOXB3-201ENST00000311626 USP26Q9BXU7 913 aa31.35■■■□□ 2.61
HOXB3-201ENST00000311626 PTPRCP08575 1304 aa31.34■■■□□ 2.61
HOXB3-201ENST00000311626 LTV1Q96GA3 475 aaPredicted RBP31.34■■■□□ 2.61
HOXB3-201ENST00000311626 CIZ1Q9ULV3 898 aaPredicted RBP31.33■■■□□ 2.61
HOXB3-201ENST00000311626 GBP4Q96PP9 640 aa31.32■■■□□ 2.6
HOXB3-201ENST00000311626 HAP1P54257 671 aaPredicted RBP31.32■■■□□ 2.6
HOXB3-201ENST00000311626 USP31Q70CQ4 1352 aa31.32■■■□□ 2.6
HOXB3-201ENST00000311626 EXOC6BQ9Y2D4 811 aa31.31■■■□□ 2.6
HOXB3-201ENST00000311626 PLEKHG1Q9ULL1 1385 aa31.3■■■□□ 2.6
HOXB3-201ENST00000311626 GAS2L3Q86XJ1 694 aa31.3■■■□□ 2.6
HOXB3-201ENST00000311626 AK9Q5TCS8 1911 aa31.29■■■□□ 2.6
HOXB3-201ENST00000311626 NLRP6P59044 892 aa31.28■■■□□ 2.6
HOXB3-201ENST00000311626 EID1Q9Y6B2 187 aa31.28■■■□□ 2.6
HOXB3-201ENST00000311626 CEP170BQ9Y4F5 1589 aaPredicted RBP31.27■■■□□ 2.6
HOXB3-201ENST00000311626 GRPEL1Q9HAV7 217 aa31.27■■■□□ 2.6
HOXB3-201ENST00000311626 SSH2Q76I76 1423 aa31.27■■■□□ 2.6
HOXB3-201ENST00000311626 TOPAZ1Q8N9V7 1692 aa31.26■■■□□ 2.59
HOXB3-201ENST00000311626 ARHGEF10O15013 1369 aa31.26■■■□□ 2.59
HOXB3-201ENST00000311626 PKP1Q13835 747 aa31.26■■■□□ 2.59
HOXB3-201ENST00000311626 RABEP1Q15276 862 aa31.26■■■□□ 2.59
HOXB3-201ENST00000311626 FLT4P35916 1363 aa31.25■■■□□ 2.59
HOXB3-201ENST00000311626 RGPD1P0DJD0 1748 aa31.25■■■□□ 2.59
HOXB3-201ENST00000311626 USHBP1Q8N6Y0 703 aa31.24■■■□□ 2.59
HOXB3-201ENST00000311626 FKBP5Q13451 457 aaPredicted RBP31.24■■■□□ 2.59
HOXB3-201ENST00000311626 KIF13AQ9H1H9 1805 aa31.23■■■□□ 2.59
HOXB3-201ENST00000311626 MRE11P49959 708 aa31.23■■■□□ 2.59
HOXB3-201ENST00000311626 SBNO1A3KN83 1393 aa31.23■■■□□ 2.59
HOXB3-201ENST00000311626 STK31Q9BXU1 1019 aa31.22■■■□□ 2.59
HOXB3-201ENST00000311626 C14orf37Q86TY3 774 aa31.22■■■□□ 2.59
HOXB3-201ENST00000311626 RGPD8O14715 1765 aaPredicted RBP31.22■■■□□ 2.59
HOXB3-201ENST00000311626 HMMRO75330 724 aa31.21■■■□□ 2.59
HOXB3-201ENST00000311626 PDE1AP54750 535 aa31.21■■■□□ 2.59
HOXB3-201ENST00000311626 TTC21AQ8NDW8 1320 aa31.21■■■□□ 2.59
HOXB3-201ENST00000311626 PNMA6EA0A0J9YXQ4 647 aa31.21■■■□□ 2.59
HOXB3-201ENST00000311626 EIF5BO60841 1220 aaKnown RBP31.21■■■□□ 2.59
HOXB3-201ENST00000311626 ZGPATQ8N5A5 531 aaKnown RBP31.21■■■□□ 2.59
HOXB3-201ENST00000311626 NALCNQ8IZF0 1738 aa31.2■■■□□ 2.59
HOXB3-201ENST00000311626 CCT4P50991 539 aaKnown RBP31.2■■■□□ 2.59
HOXB3-201ENST00000311626 CASC1Q6TDU7 716 aa31.2■■■□□ 2.59
HOXB3-201ENST00000311626 IGSF1Q8N6C5 1336 aa31.2■■■□□ 2.58
HOXB3-201ENST00000311626 FLIIQ13045 1269 aa31.2■■■□□ 2.58
HOXB3-201ENST00000311626 BAG4O95429 457 aaKnown RBP31.19■■■□□ 2.58
HOXB3-201ENST00000311626 GNAI2P04899 355 aa31.19■■■□□ 2.58
HOXB3-201ENST00000311626 RBM33Q96EV2 1170 aaKnown RBP31.19■■■□□ 2.58
HOXB3-201ENST00000311626 CHAMP1Q96JM3 812 aa31.18■■■□□ 2.58
HOXB3-201ENST00000311626 PLEKHG5O94827 1062 aa31.18■■■□□ 2.58
HOXB3-201ENST00000311626 IL17REQ8NFR9 667 aa31.17■■■□□ 2.58
HOXB3-201ENST00000311626 MCTP1Q6DN14 999 aa31.16■■■□□ 2.58
HOXB3-201ENST00000311626 GNAT3A8MTJ3 354 aa31.15■■■□□ 2.58
HOXB3-201ENST00000311626 HOXC9P31274 260 aa31.15■■■□□ 2.58
HOXB3-201ENST00000311626 KDRP35968 1356 aa31.15■■■□□ 2.58
HOXB3-201ENST00000311626 ERC2O15083 957 aa31.14■■■□□ 2.58
HOXB3-201ENST00000311626 FOXD4L5Q5VV16 416 aaPredicted RBP31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms