RNA–Protein interactions for RNA: ENST00000311330.3

CD248-201, Transcript of CD248 molecule, humanhuman

APPRIS P1 BASIC

Gene CD248, Length 2,558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD248-201ENST00000311330 KDRP35968 1356 aa23.19■■□□□ 1.3
CD248-201ENST00000311330 CHD1LQ86WJ1 897 aa23.18■■□□□ 1.3
CD248-201ENST00000311330 ANKRD45Q5TZF3 282 aa23.18■■□□□ 1.3
CD248-201ENST00000311330 UPF2Q9HAU5 1272 aaKnown RBP23.17■■□□□ 1.3
CD248-201ENST00000311330 TSPYL4Q9UJ04 414 aa23.17■■□□□ 1.3
CD248-201ENST00000311330 PLEKHG5O94827 1062 aa23.16■■□□□ 1.3
CD248-201ENST00000311330 USHBP1Q8N6Y0 703 aa23.16■■□□□ 1.3
CD248-201ENST00000311330 TBC1D32Q96NH3 1257 aa23.16■■□□□ 1.3
CD248-201ENST00000311330 CHMP4BQ9H444 224 aaKnown RBP23.16■■□□□ 1.3
CD248-201ENST00000311330 MARF1Q9Y4F3 1742 aaKnown RBP23.16■■□□□ 1.3
CD248-201ENST00000311330 ESCO1Q5FWF5 840 aa23.15■■□□□ 1.3
CD248-201ENST00000311330 KIAA0232Q92628 1395 aa23.15■■□□□ 1.3
CD248-201ENST00000311330 CHD2O14647 1828 aaKnown RBP23.15■■□□□ 1.3
CD248-201ENST00000311330 MFAP1P55081 439 aaKnown RBP23.14■■□□□ 1.3
CD248-201ENST00000311330 ZBTB7CA1YPR0 619 aa23.14■■□□□ 1.29
CD248-201ENST00000311330 SLC4A2P04920 1241 aa23.14■■□□□ 1.29
CD248-201ENST00000311330 GAS2L2Q8NHY3 880 aa23.13■■□□□ 1.29
CD248-201ENST00000311330 RGS12O14924 1447 aa23.13■■□□□ 1.29
CD248-201ENST00000311330 PSME1Q06323 249 aa23.11■■□□□ 1.29
CD248-201ENST00000311330 INTS3Q68E01 1043 aaKnown RBP23.11■■□□□ 1.29
CD248-201ENST00000311330 GCC1Q96CN9 775 aa23.11■■□□□ 1.29
CD248-201ENST00000311330 XPCQ01831 940 aaPredicted RBP23.11■■□□□ 1.29
CD248-201ENST00000311330 G2E3Q7L622 706 aa23.11■■□□□ 1.29
CD248-201ENST00000311330 HAP1P54257 671 aaPredicted RBP23.1■■□□□ 1.29
CD248-201ENST00000311330 NFKBIBQ15653 356 aa23.09■■□□□ 1.29
CD248-201ENST00000311330 GNAT3A8MTJ3 354 aa23.09■■□□□ 1.29
CD248-201ENST00000311330 NWD1Q149M9 1564 aa23.09■■□□□ 1.29
CD248-201ENST00000311330 F6X3S4 739 aa23.07■■□□□ 1.28
CD248-201ENST00000311330 IL17REQ8NFR9 667 aa23.07■■□□□ 1.28
CD248-201ENST00000311330 NECTIN2Q92692 538 aa23.07■■□□□ 1.28
CD248-201ENST00000311330 ORAI2Q96SN7 254 aa23.07■■□□□ 1.28
CD248-201ENST00000311330 ZNF142P52746 1687 aaPredicted RBP23.07■■□□□ 1.28
CD248-201ENST00000311330 C22orf23Q9BZE7 217 aa23.07■■□□□ 1.28
CD248-201ENST00000311330 MSH6P52701 1360 aa23.07■■□□□ 1.28
CD248-201ENST00000311330 BECN1Q14457 450 aa23.06■■□□□ 1.28
CD248-201ENST00000311330 ADGRL3Q9HAR2 1447 aa23.06■■□□□ 1.28
CD248-201ENST00000311330 SETD1BQ9UPS6 1966 aaKnown RBP23.06■■□□□ 1.28
CD248-201ENST00000311330 ADAMTSL3P82987 1691 aa23.06■■□□□ 1.28
CD248-201ENST00000311330 SLC4A10Q6U841 1118 aa23.06■■□□□ 1.28
CD248-201ENST00000311330 MEIS3Q99687 375 aa23.06■■□□□ 1.28
CD248-201ENST00000311330 USP35Q9P2H5 1018 aa23.05■■□□□ 1.28
CD248-201ENST00000311330 KIF24Q5T7B8 1368 aa23.05■■□□□ 1.28
CD248-201ENST00000311330 PTPRCP08575 1304 aa23.05■■□□□ 1.28
CD248-201ENST00000311330 NPHP4O75161 1426 aaPredicted RBP23.05■■□□□ 1.28
CD248-201ENST00000311330 SLKQ9H2G2 1235 aaPredicted RBP23.04■■□□□ 1.28
CD248-201ENST00000311330 NBPF6Q5VWK0 638 aa23.03■■□□□ 1.28
CD248-201ENST00000311330 IP6K1Q92551 441 aa23.03■■□□□ 1.28
CD248-201ENST00000311330 NBPF4Q96M43 638 aa23.03■■□□□ 1.28
CD248-201ENST00000311330 TBC1D2Q9BYX2 928 aa23.03■■□□□ 1.28
CD248-201ENST00000311330 LMOD2Q6P5Q4 547 aa23.03■■□□□ 1.28
CD248-201ENST00000311330 HTATSF1O43719 755 aaKnown RBP23.02■■□□□ 1.28
CD248-201ENST00000311330 MAP3K5Q99683 1374 aa23.02■■□□□ 1.28
CD248-201ENST00000311330 LTN1O94822 1766 aa23.02■■□□□ 1.28
CD248-201ENST00000311330 USP54Q70EL1 1684 aa23.02■■□□□ 1.28
CD248-201ENST00000311330 BMP2KLQ5H9B9 411 aa23.01■■□□□ 1.27
CD248-201ENST00000311330 ATP10DQ9P241 1426 aa23.01■■□□□ 1.27
CD248-201ENST00000311330 APBB1O00213 710 aa23.01■■□□□ 1.27
CD248-201ENST00000311330 CEP85Q6P2H3 762 aa23.01■■□□□ 1.27
CD248-201ENST00000311330 ANKRD44Q8N8A2 993 aa23.01■■□□□ 1.27
CD248-201ENST00000311330 LRRC59Q96AG4 307 aaKnown RBP23.01■■□□□ 1.27
CD248-201ENST00000311330 DCTPP1Q9H773 170 aa23.01■■□□□ 1.27
CD248-201ENST00000311330 C16orf71Q8IYS4 520 aaPredicted RBP23■■□□□ 1.27
CD248-201ENST00000311330 RTL1A6NKG5 1358 aa23■■□□□ 1.27
CD248-201ENST00000311330 FRAT2O75474 233 aaPredicted RBP23■■□□□ 1.27
CD248-201ENST00000311330 SPRYD3Q8NCJ5 442 aa23■■□□□ 1.27
CD248-201ENST00000311330 STK31Q9BXU1 1019 aa22.99■■□□□ 1.27
CD248-201ENST00000311330 NFAT5O94916 1531 aa22.99■■□□□ 1.27
CD248-201ENST00000311330 TAF7Q15545 349 aaPredicted RBP22.98■■□□□ 1.27
CD248-201ENST00000311330 PROSER2Q86WR7 435 aaPredicted RBP22.97■■□□□ 1.27
CD248-201ENST00000311330 RPAP2Q8IXW5 612 aaPredicted RBP22.97■■□□□ 1.27
CD248-201ENST00000311330 SMARCA5O60264 1052 aaPredicted RBP22.96■■□□□ 1.27
CD248-201ENST00000311330 OTUD7AQ8TE49 926 aaPredicted RBP22.96■■□□□ 1.27
CD248-201ENST00000311330 LGR6Q9HBX8 967 aa22.96■■□□□ 1.27
CD248-201ENST00000311330 LRRC37A3O60309 1634 aa22.96■■□□□ 1.27
CD248-201ENST00000311330 PLEKHM2Q8IWE5 1019 aa22.96■■□□□ 1.27
CD248-201ENST00000311330 KCNH5Q8NCM2 988 aa22.96■■□□□ 1.27
CD248-201ENST00000311330 GCP02774 474 aa22.95■■□□□ 1.26
CD248-201ENST00000311330 FLIIQ13045 1269 aa22.95■■□□□ 1.26
CD248-201ENST00000311330 FKBP5Q13451 457 aaPredicted RBP22.95■■□□□ 1.26
CD248-201ENST00000311330 CCDC30Q5VVM6 783 aa22.95■■□□□ 1.26
CD248-201ENST00000311330 TBC1D9Q6ZT07 1266 aa22.95■■□□□ 1.26
CD248-201ENST00000311330 GSPT1P15170 499 aaKnown RBP22.94■■□□□ 1.26
CD248-201ENST00000311330 CCT4P50991 539 aaKnown RBP22.93■■□□□ 1.26
CD248-201ENST00000311330 RGPD2P0DJD1 1756 aa22.92■■□□□ 1.26
CD248-201ENST00000311330 ANTXR1Q9H6X2 564 aa22.92■■□□□ 1.26
CD248-201ENST00000311330 KRT28Q7Z3Y7 464 aa22.9■■□□□ 1.26
CD248-201ENST00000311330 ARHGEF25Q86VW2 580 aa22.9■■□□□ 1.26
CD248-201ENST00000311330 KCNQ3O43525 872 aa22.9■■□□□ 1.26
CD248-201ENST00000311330 ZNF530Q6P9A1 599 aaPredicted RBP22.89■■□□□ 1.25
CD248-201ENST00000311330 MPRIPQ6WCQ1 1025 aa22.89■■□□□ 1.25
CD248-201ENST00000311330 EIF2S2P20042 333 aaKnown RBP22.89■■□□□ 1.25
CD248-201ENST00000311330 RBM25P49756 843 aaKnown RBP22.89■■□□□ 1.25
CD248-201ENST00000311330 HDGFL1Q5TGJ6 251 aa22.89■■□□□ 1.25
CD248-201ENST00000311330 PHAXQ9H814 394 aaKnown RBP22.89■■□□□ 1.25
CD248-201ENST00000311330 AXIN2Q9Y2T1 843 aa22.88■■□□□ 1.25
CD248-201ENST00000311330 CEMIPQ8WUJ3 1361 aa22.87■■□□□ 1.25
CD248-201ENST00000311330 TTC22Q5TAA0 569 aa22.87■■□□□ 1.25
CD248-201ENST00000311330 FAM208AQ9UK61 1670 aaKnown RBP22.87■■□□□ 1.25
CD248-201ENST00000311330 ANKRD24Q8TF21 1146 aa22.87■■□□□ 1.25
CD248-201ENST00000311330 DDX17Q92841 729 aaKnown RBP22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms