RNA–Protein interactions for RNA: ENST00000311191.10

LRCH1-201, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRCH1, Length 4,710 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-201ENST00000311191 KIF1BO60333 1816 aa21.93■■□□□ 1.1
LRCH1-201ENST00000311191 NEUROD6Q96NK8 337 aa21.93■■□□□ 1.1
LRCH1-201ENST00000311191 RIMS1Q86UR5 1692 aaKnown RBP21.92■■□□□ 1.1
LRCH1-201ENST00000311191 GNL2Q13823 731 aaKnown RBP21.92■■□□□ 1.1
LRCH1-201ENST00000311191 TCERG1O14776 1098 aaKnown RBP21.92■■□□□ 1.1
LRCH1-201ENST00000311191 PHF14O94880 888 aa21.92■■□□□ 1.1
LRCH1-201ENST00000311191 MFAP1P55081 439 aaKnown RBP21.92■■□□□ 1.1
LRCH1-201ENST00000311191 SETDB2Q96T68 719 aa21.92■■□□□ 1.1
LRCH1-201ENST00000311191 KRT27Q7Z3Y8 459 aa21.91■■□□□ 1.1
LRCH1-201ENST00000311191 FBXO41Q8TF61 875 aa21.91■■□□□ 1.1
LRCH1-201ENST00000311191 SBNO2Q9Y2G9 1366 aa21.91■■□□□ 1.1
LRCH1-201ENST00000311191 PLIN1O60240 522 aa21.91■■□□□ 1.1
LRCH1-201ENST00000311191 CCDC158Q5M9N0 1113 aa21.91■■□□□ 1.1
LRCH1-201ENST00000311191 EXOSC9Q06265 439 aaKnown RBP21.9■■□□□ 1.1
LRCH1-201ENST00000311191 TRAPPC3LQ5T215 181 aa21.9■■□□□ 1.1
LRCH1-201ENST00000311191 A0A1W2PP64 1363 aa21.9■■□□□ 1.1
LRCH1-201ENST00000311191 DDX46Q7L014 1031 aaKnown RBP21.9■■□□□ 1.1
LRCH1-201ENST00000311191 CLASRPQ8N2M8 674 aaKnown RBP21.9■■□□□ 1.1
LRCH1-201ENST00000311191 NBPF6Q5VWK0 638 aa21.89■■□□□ 1.1
LRCH1-201ENST00000311191 NBPF5PQ86XG9 351 aaPredicted RBP21.89■■□□□ 1.1
LRCH1-201ENST00000311191 NBPF4Q96M43 638 aa21.89■■□□□ 1.1
LRCH1-201ENST00000311191 MAP3K19Q56UN5 1328 aa21.89■■□□□ 1.1
LRCH1-201ENST00000311191 SYNE3Q6ZMZ3 975 aa21.89■■□□□ 1.1
LRCH1-201ENST00000311191 CDC5LQ99459 802 aaKnown RBP21.89■■□□□ 1.1
LRCH1-201ENST00000311191 ZRANB1Q9UGI0 708 aa21.89■■□□□ 1.1
LRCH1-201ENST00000311191 KIF3AQ9Y496 699 aa21.89■■□□□ 1.1
LRCH1-201ENST00000311191 DIAPH3Q9NSV4 1193 aa21.89■■□□□ 1.09
LRCH1-201ENST00000311191 ASXL1Q8IXJ9 1541 aa21.89■■□□□ 1.09
LRCH1-201ENST00000311191 C16orf71Q8IYS4 520 aaPredicted RBP21.89■■□□□ 1.09
LRCH1-201ENST00000311191 TRMT112Q9UI30 125 aaKnown RBP21.89■■□□□ 1.09
LRCH1-201ENST00000311191 KDM4FA0A1W2PPD8 638 aa21.88■■□□□ 1.09
LRCH1-201ENST00000311191 NCOA3Q9Y6Q9 1424 aa21.88■■□□□ 1.09
LRCH1-201ENST00000311191 GNAI2P04899 355 aa21.88■■□□□ 1.09
LRCH1-201ENST00000311191 ZC3H13Q5T200 1668 aaKnown RBP21.88■■□□□ 1.09
LRCH1-201ENST00000311191 DUSP27Q5VZP5 1158 aa21.88■■□□□ 1.09
LRCH1-201ENST00000311191 SETD1BQ9UPS6 1966 aaKnown RBP21.88■■□□□ 1.09
LRCH1-201ENST00000311191 CDC42BPBQ9Y5S2 1711 aa21.88■■□□□ 1.09
LRCH1-201ENST00000311191 SLC3A2P08195 630 aaKnown RBP21.88■■□□□ 1.09
LRCH1-201ENST00000311191 B4GALNT3Q6L9W6 998 aa21.87■■□□□ 1.09
LRCH1-201ENST00000311191 POLR3AO14802 1390 aaPredicted RBP21.87■■□□□ 1.09
LRCH1-201ENST00000311191 CAMSAP1Q5T5Y3 1602 aa21.87■■□□□ 1.09
LRCH1-201ENST00000311191 MCM10Q7L590 875 aa21.87■■□□□ 1.09
LRCH1-201ENST00000311191 EIF4A2Q14240 407 aaKnown RBP21.87■■□□□ 1.09
LRCH1-201ENST00000311191 CEP126Q9P2H0 1117 aa21.87■■□□□ 1.09
LRCH1-201ENST00000311191 IQGAP3Q86VI3 1631 aa21.86■■□□□ 1.09
LRCH1-201ENST00000311191 ROBO2Q9HCK4 1378 aa21.86■■□□□ 1.09
LRCH1-201ENST00000311191 CLTCQ00610 1675 aaKnown RBP21.86■■□□□ 1.09
LRCH1-201ENST00000311191 CCDC27Q2M243 656 aa21.86■■□□□ 1.09
LRCH1-201ENST00000311191 CCAR1Q8IX12 1150 aaKnown RBP21.86■■□□□ 1.09
LRCH1-201ENST00000311191 INO80Q9ULG1 1556 aaPredicted RBP21.86■■□□□ 1.09
LRCH1-201ENST00000311191 ZNF622Q969S3 477 aaKnown RBP eCLIP21.86■■□□□ 1.09
LRCH1-201ENST00000311191 CARD10Q9BWT7 1032 aa21.85■■□□□ 1.09
LRCH1-201ENST00000311191 TRDNQ13061 729 aa21.85■■□□□ 1.09
LRCH1-201ENST00000311191 TPTE2Q6XPS3 522 aa21.85■■□□□ 1.09
LRCH1-201ENST00000311191 AFF2P51816 1311 aa21.85■■□□□ 1.09
LRCH1-201ENST00000311191 DDX17Q92841 729 aaKnown RBP21.84■■□□□ 1.09
LRCH1-201ENST00000311191 POLKQ9UBT6 870 aa21.84■■□□□ 1.09
LRCH1-201ENST00000311191 APPP05067 770 aa21.84■■□□□ 1.09
LRCH1-201ENST00000311191 SPATA31A3Q5VYP0 1347 aa21.84■■□□□ 1.09
LRCH1-201ENST00000311191 CPLX2Q6PUV4 134 aaKnown RBP21.84■■□□□ 1.09
LRCH1-201ENST00000311191 SLF2Q8IX21 1173 aa21.84■■□□□ 1.09
LRCH1-201ENST00000311191 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.84■■□□□ 1.09
LRCH1-201ENST00000311191 ZSCAN25Q6NSZ9 544 aa21.82■■□□□ 1.08
LRCH1-201ENST00000311191 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.82■■□□□ 1.08
LRCH1-201ENST00000311191 CAVIN4Q5BKX8 364 aa21.82■■□□□ 1.08
LRCH1-201ENST00000311191 SOS1Q07889 1333 aaPredicted RBP21.82■■□□□ 1.08
LRCH1-201ENST00000311191 PLA2R1Q13018 1463 aa21.82■■□□□ 1.08
LRCH1-201ENST00000311191 IFIT1P09914 478 aaKnown RBP21.82■■□□□ 1.08
LRCH1-201ENST00000311191 CCDC87Q9NVE4 849 aa21.82■■□□□ 1.08
LRCH1-201ENST00000311191 AKAP2Q9Y2D5 859 aa21.82■■□□□ 1.08
LRCH1-201ENST00000311191 SPATA31E1Q6ZUB1 1445 aa21.82■■□□□ 1.08
LRCH1-201ENST00000311191 CEP170BQ9Y4F5 1589 aaPredicted RBP21.81■■□□□ 1.08
LRCH1-201ENST00000311191 RBM5P52756 815 aaKnown RBP eCLIP21.81■■□□□ 1.08
LRCH1-201ENST00000311191 AKAP17AQ02040 695 aaKnown RBP21.81■■□□□ 1.08
LRCH1-201ENST00000311191 WASHC4Q2M389 1173 aa21.81■■□□□ 1.08
LRCH1-201ENST00000311191 ANKRD45Q5TZF3 282 aa21.81■■□□□ 1.08
LRCH1-201ENST00000311191 NLRP3Q96P20 1036 aa21.81■■□□□ 1.08
LRCH1-201ENST00000311191 ANKIB1Q9P2G1 1089 aa21.81■■□□□ 1.08
LRCH1-201ENST00000311191 BABAM1Q9NWV8 329 aa21.8■■□□□ 1.08
LRCH1-201ENST00000311191 TTC39AQ5SRH9 613 aa21.8■■□□□ 1.08
LRCH1-201ENST00000311191 TESK2Q96S53 571 aa21.8■■□□□ 1.08
LRCH1-201ENST00000311191 RTL1A6NKG5 1358 aa21.79■■□□□ 1.08
LRCH1-201ENST00000311191 MAP3K5Q99683 1374 aa21.79■■□□□ 1.08
LRCH1-201ENST00000311191 PLEKHH1Q9ULM0 1364 aa21.79■■□□□ 1.08
LRCH1-201ENST00000311191 IL16Q14005 1332 aa21.79■■□□□ 1.08
LRCH1-201ENST00000311191 ABCA6Q8N139 1617 aa21.79■■□□□ 1.08
LRCH1-201ENST00000311191 KIF24Q5T7B8 1368 aa21.79■■□□□ 1.08
LRCH1-201ENST00000311191 ERVV-2B6SEH9 535 aa21.79■■□□□ 1.08
LRCH1-201ENST00000311191 GNPATO15228 680 aa21.79■■□□□ 1.08
LRCH1-201ENST00000311191 EYA1Q99502 592 aa21.79■■□□□ 1.08
LRCH1-201ENST00000311191 ERICH2A1L162 156 aa21.79■■□□□ 1.08
LRCH1-201ENST00000311191 HSPA1LP34931 641 aa21.79■■□□□ 1.08
LRCH1-201ENST00000311191 CCDC34Q96HJ3 373 aa21.79■■□□□ 1.08
LRCH1-201ENST00000311191 SURF6O75683 361 aaKnown RBP21.78■■□□□ 1.08
LRCH1-201ENST00000311191 UNC13BO14795 1591 aa21.78■■□□□ 1.08
LRCH1-201ENST00000311191 ANKRD18BA2A2Z9 1011 aa21.78■■□□□ 1.08
LRCH1-201ENST00000311191 RNF20Q5VTR2 975 aa21.78■■□□□ 1.08
LRCH1-201ENST00000311191 IFIT5Q13325 482 aaKnown RBP21.78■■□□□ 1.08
LRCH1-201ENST00000311191 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.78■■□□□ 1.081e-6■■□□□ 14.1
LRCH1-201ENST00000311191 HIP1O00291 1037 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms