RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 UQCRHP07919 91 aa9.82□□□□□ -0.84
VPS41-202ENST00000310301 HMOX1P09601 288 aa9.82□□□□□ -0.84
VPS41-202ENST00000310301 RIPK4P57078 832 aa9.82□□□□□ -0.84
VPS41-202ENST00000310301 CHRNA2Q15822 529 aa9.82□□□□□ -0.84
VPS41-202ENST00000310301 HOOK1Q9UJC3 728 aaKnown RBP9.82□□□□□ -0.84
VPS41-202ENST00000310301 ELL2O00472 640 aaPredicted RBP9.81□□□□□ -0.84
VPS41-202ENST00000310301 RIC3Q7Z5B4 369 aa9.81□□□□□ -0.84
VPS41-202ENST00000310301 ZKSCAN1P17029 563 aaPredicted RBP9.81□□□□□ -0.84
VPS41-202ENST00000310301 NAP1L1P55209 391 aaKnown RBP9.81□□□□□ -0.84
VPS41-202ENST00000310301 SULT6B1Q6IMI4 303 aa9.81□□□□□ -0.84
VPS41-202ENST00000310301 LTKP29376 864 aa9.81□□□□□ -0.84
VPS41-202ENST00000310301 TRIM29Q14134 588 aa9.81□□□□□ -0.84
VPS41-202ENST00000310301 TSPYL1Q9H0U9 437 aa9.81□□□□□ -0.84
VPS41-202ENST00000310301 C9orf78Q9NZ63 289 aaPredicted RBP9.81□□□□□ -0.84
VPS41-202ENST00000310301 TSPY26PQ9H489 355 aa9.81□□□□□ -0.84
VPS41-202ENST00000310301 BTG4Q9NY30 223 aa9.81□□□□□ -0.84
VPS41-202ENST00000310301 SAMD9LQ8IVG5 1584 aa9.8□□□□□ -0.84
VPS41-202ENST00000310301 IFNL2Q8IZJ0 200 aa9.8□□□□□ -0.84
VPS41-202ENST00000310301 PDILTQ8N807 584 aa9.8□□□□□ -0.84
VPS41-202ENST00000310301 RUFY2Q8WXA3 655 aa9.8□□□□□ -0.84
VPS41-202ENST00000310301 TTC21BQ7Z4L5 1316 aa9.8□□□□□ -0.84
VPS41-202ENST00000310301 AMOTL1Q8IY63 956 aa9.8□□□□□ -0.84
VPS41-202ENST00000310301 ANKRD24Q8TF21 1146 aa9.8□□□□□ -0.84
VPS41-202ENST00000310301 DDX19BQ9UMR2 479 aa9.8□□□□□ -0.84
VPS41-202ENST00000310301 SKIDA1Q1XH10 827 aa9.8□□□□□ -0.84
VPS41-202ENST00000310301 CCDC73Q6ZRK6 1079 aa9.8□□□□□ -0.84
VPS41-202ENST00000310301 RUNDC1Q96C34 613 aa9.8□□□□□ -0.84
VPS41-202ENST00000310301 CAGE1Q8TC20 777 aa9.8□□□□□ -0.84
VPS41-202ENST00000310301 PTPRMP28827 1452 aa9.8□□□□□ -0.84
VPS41-202ENST00000310301 LRRFIP1Q32MZ4 808 aaKnown RBP9.8□□□□□ -0.84
VPS41-202ENST00000310301 INTS3Q68E01 1043 aaKnown RBP9.8□□□□□ -0.84
VPS41-202ENST00000310301 TRIM5Q9C035 493 aa9.8□□□□□ -0.84
VPS41-202ENST00000310301 IL2RBP14784 551 aa9.79□□□□□ -0.84
VPS41-202ENST00000310301 PUS7Q96PZ0 661 aaKnown RBP9.79□□□□□ -0.84
VPS41-202ENST00000310301 ZRANB1Q9UGI0 708 aa9.79□□□□□ -0.84
VPS41-202ENST00000310301 SYNE3Q6ZMZ3 975 aa9.79□□□□□ -0.84
VPS41-202ENST00000310301 ADGRL2O95490 1459 aa9.79□□□□□ -0.84
VPS41-202ENST00000310301 FOSBP53539 338 aa9.79□□□□□ -0.84
VPS41-202ENST00000310301 SHROOM2Q13796 1616 aa9.79□□□□□ -0.84
VPS41-202ENST00000310301 LETM1O95202 739 aaPredicted RBP9.79□□□□□ -0.84
VPS41-202ENST00000310301 ZCRB1Q8TBF4 217 aaKnown RBP9.79□□□□□ -0.84
VPS41-202ENST00000310301 CCDC47Q96A33 483 aaKnown RBP9.79□□□□□ -0.84
VPS41-202ENST00000310301 NAT10Q9H0A0 1025 aaKnown RBP9.79□□□□□ -0.84
VPS41-202ENST00000310301 PZPP20742 1482 aa9.79□□□□□ -0.84
VPS41-202ENST00000310301 WDHD1O75717 1129 aaPredicted RBP9.78□□□□□ -0.84
VPS41-202ENST00000310301 TTLL5Q6EMB2 1281 aa9.78□□□□□ -0.84
VPS41-202ENST00000310301 CPLX2Q6PUV4 134 aaKnown RBP9.78□□□□□ -0.84
VPS41-202ENST00000310301 MPRIPQ6WCQ1 1025 aa9.78□□□□□ -0.84
VPS41-202ENST00000310301 AXDND1Q5T1B0 1012 aaPredicted RBP9.78□□□□□ -0.84
VPS41-202ENST00000310301 TTC37Q6PGP7 1564 aa9.78□□□□□ -0.84
VPS41-202ENST00000310301 DZIP1LQ8IYY4 767 aaKnown RBP9.78□□□□□ -0.84
VPS41-202ENST00000310301 ABCA9Q8IUA7 1624 aa9.78□□□□□ -0.84
VPS41-202ENST00000310301 MAST1Q9Y2H9 1570 aa9.77□□□□□ -0.84
VPS41-202ENST00000310301 CPLX1O14810 134 aa9.77□□□□□ -0.84
VPS41-202ENST00000310301 SPC24Q8NBT2 197 aa9.77□□□□□ -0.84
VPS41-202ENST00000310301 GRPEL1Q9HAV7 217 aa9.77□□□□□ -0.84
VPS41-202ENST00000310301 YTHDC2Q9H6S0 1430 aaKnown RBP9.77□□□□□ -0.84
VPS41-202ENST00000310301 PRPF40AO75400 957 aaKnown RBP9.77□□□□□ -0.85
VPS41-202ENST00000310301 TCP11L2Q8N4U5 519 aa9.77□□□□□ -0.85
VPS41-202ENST00000310301 DIP2BQ9P265 1576 aa9.77□□□□□ -0.85
VPS41-202ENST00000310301 RRS1Q15050 365 aaKnown RBP9.77□□□□□ -0.85
VPS41-202ENST00000310301 C16orf71Q8IYS4 520 aaPredicted RBP9.77□□□□□ -0.85
VPS41-202ENST00000310301 CWC22Q9HCG8 908 aaKnown RBP9.77□□□□□ -0.85
VPS41-202ENST00000310301 ERICH4A6NGS2 130 aa9.77□□□□□ -0.85
VPS41-202ENST00000310301 RFC4P35249 363 aa9.77□□□□□ -0.85
VPS41-202ENST00000310301 NME9Q86XW9 330 aa9.77□□□□□ -0.85
VPS41-202ENST00000310301 APAF1O14727 1248 aa9.77□□□□□ -0.85
VPS41-202ENST00000310301 LNPKQ9C0E8 428 aa9.77□□□□□ -0.85
VPS41-202ENST00000310301 ERVK-7P63135 1459 aa9.76□□□□□ -0.85
VPS41-202ENST00000310301 CCDC30Q5VVM6 783 aa9.76□□□□□ -0.85
VPS41-202ENST00000310301 TAF3Q5VWG9 929 aa9.76□□□□□ -0.85
VPS41-202ENST00000310301 OLFM4Q6UX06 510 aa9.76□□□□□ -0.85
VPS41-202ENST00000310301 MBD3O95983 291 aa9.76□□□□□ -0.85
VPS41-202ENST00000310301 ORAI2Q96SN7 254 aa9.76□□□□□ -0.85
VPS41-202ENST00000310301 DNMT1P26358 1616 aaKnown RBP9.76□□□□□ -0.85
VPS41-202ENST00000310301 GCP02774 474 aa9.76□□□□□ -0.85
VPS41-202ENST00000310301 PRKAR2BP31323 418 aa9.76□□□□□ -0.85
VPS41-202ENST00000310301 TFCP2L1Q9NZI6 479 aa9.76□□□□□ -0.85
VPS41-202ENST00000310301 NSD2O96028 1365 aa9.76□□□□□ -0.85
VPS41-202ENST00000310301 PPIP5K1Q6PFW1 1433 aa9.76□□□□□ -0.85
VPS41-202ENST00000310301 SMC2O95347 1197 aa9.75□□□□□ -0.85
VPS41-202ENST00000310301 RNF20Q5VTR2 975 aa9.75□□□□□ -0.85
VPS41-202ENST00000310301 CABLES1Q8TDN4 633 aa9.75□□□□□ -0.85
VPS41-202ENST00000310301 PRDM10Q9NQV6 1147 aa9.75□□□□□ -0.85
VPS41-202ENST00000310301 PREX2Q70Z35 1606 aa9.75□□□□□ -0.85
VPS41-202ENST00000310301 JCADQ9P266 1359 aa9.75□□□□□ -0.85
VPS41-202ENST00000310301 ARHGEF12Q9NZN5 1544 aa9.75□□□□□ -0.85
VPS41-202ENST00000310301 CCP110O43303 1012 aa9.75□□□□□ -0.85
VPS41-202ENST00000310301 KIAA0754O94854 1291 aa9.75□□□□□ -0.85
VPS41-202ENST00000310301 API5Q9BZZ5 524 aaKnown RBP9.75□□□□□ -0.85
VPS41-202ENST00000310301 CTDP1Q9Y5B0 961 aaPredicted RBP9.75□□□□□ -0.85
VPS41-202ENST00000310301 FKBP5Q13451 457 aaPredicted RBP9.75□□□□□ -0.85
VPS41-202ENST00000310301 CCDC27Q2M243 656 aa9.75□□□□□ -0.85
VPS41-202ENST00000310301 CCDC112Q8NEF3 446 aa9.75□□□□□ -0.85
VPS41-202ENST00000310301 GNAT3A8MTJ3 354 aa9.75□□□□□ -0.85
VPS41-202ENST00000310301 ESPNB1AK53 854 aa9.75□□□□□ -0.85
VPS41-202ENST00000310301 ABCC11Q96J66 1382 aa9.75□□□□□ -0.85
VPS41-202ENST00000310301 APBA3O96018 575 aa9.74□□□□□ -0.85
VPS41-202ENST00000310301 MPNDQ8N594 471 aa9.74□□□□□ -0.85
VPS41-202ENST00000310301 DEF6Q9H4E7 631 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms