RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 ALDH1L2Q3SY69 923 aa11.23□□□□□ -0.61
XCR1-201ENST00000309285 C22orf23Q9BZE7 217 aa11.23□□□□□ -0.61
XCR1-201ENST00000309285 ABCA6Q8N139 1617 aa11.23□□□□□ -0.61
XCR1-201ENST00000309285 RILPL2Q969X0 211 aa11.23□□□□□ -0.61
XCR1-201ENST00000309285 MBIPQ9NS73 344 aa11.23□□□□□ -0.61
XCR1-201ENST00000309285 TRIM35Q9UPQ4 493 aa11.23□□□□□ -0.61
XCR1-201ENST00000309285 ARHGAP31Q2M1Z3 1444 aa11.23□□□□□ -0.61
XCR1-201ENST00000309285 LAMC1P11047 1609 aa11.23□□□□□ -0.61
XCR1-201ENST00000309285 CCAR2Q8N163 923 aaKnown RBP11.22□□□□□ -0.61
XCR1-201ENST00000309285 RAD21O60216 631 aa11.22□□□□□ -0.61
XCR1-201ENST00000309285 MARCH6O60337 910 aa11.22□□□□□ -0.61
XCR1-201ENST00000309285 XPCQ01831 940 aaPredicted RBP11.22□□□□□ -0.61
XCR1-201ENST00000309285 ADGRB3O60242 1522 aa11.22□□□□□ -0.61
XCR1-201ENST00000309285 C1orf141Q5JVX7 400 aa11.22□□□□□ -0.61
XCR1-201ENST00000309285 LMTK2Q8IWU2 1503 aa11.21□□□□□ -0.61
XCR1-201ENST00000309285 KDM2BQ8NHM5 1336 aa11.21□□□□□ -0.61
XCR1-201ENST00000309285 CBX1P83916 185 aa11.21□□□□□ -0.61
XCR1-201ENST00000309285 CCDC173Q0VFZ6 552 aa11.21□□□□□ -0.61
XCR1-201ENST00000309285 GPS2Q13227 327 aa11.21□□□□□ -0.61
XCR1-201ENST00000309285 DIAPH3Q9NSV4 1193 aa11.21□□□□□ -0.61
XCR1-201ENST00000309285 PRM3Q9NNZ6 103 aa11.21□□□□□ -0.62
XCR1-201ENST00000309285 CCDC39Q9UFE4 941 aa11.21□□□□□ -0.62
XCR1-201ENST00000309285 METP08581 1390 aa11.21□□□□□ -0.62
XCR1-201ENST00000309285 LTKP29376 864 aa11.21□□□□□ -0.62
XCR1-201ENST00000309285 CGNQ9P2M7 1197 aaKnown RBP11.21□□□□□ -0.62
XCR1-201ENST00000309285 MCTP1Q6DN14 999 aa11.2□□□□□ -0.62
XCR1-201ENST00000309285 TSPYL6Q8N831 410 aa11.2□□□□□ -0.62
XCR1-201ENST00000309285 EIF4A2Q14240 407 aaKnown RBP11.2□□□□□ -0.62
XCR1-201ENST00000309285 MPNDQ8N594 471 aa11.2□□□□□ -0.62
XCR1-201ENST00000309285 PROSER2Q86WR7 435 aaPredicted RBP11.2□□□□□ -0.62
XCR1-201ENST00000309285 CHD1LQ86WJ1 897 aa11.2□□□□□ -0.62
XCR1-201ENST00000309285 C8orf34Q49A92 452 aa11.19□□□□□ -0.62
XCR1-201ENST00000309285 NOM1Q5C9Z4 860 aaKnown RBP11.19□□□□□ -0.62
XCR1-201ENST00000309285 GCC1Q96CN9 775 aa11.19□□□□□ -0.62
XCR1-201ENST00000309285 SF3A1Q15459 793 aaKnown RBP11.19□□□□□ -0.62
XCR1-201ENST00000309285 ST18O60284 1047 aa11.19□□□□□ -0.62
XCR1-201ENST00000309285 ZFYVE9O95405 1425 aa11.19□□□□□ -0.62
XCR1-201ENST00000309285 HMGN5P82970 282 aaKnown RBP11.19□□□□□ -0.62
XCR1-201ENST00000309285 C8orf58Q8NAV2 365 aa11.19□□□□□ -0.62
XCR1-201ENST00000309285 TMEM2Q9UHN6 1383 aa11.18□□□□□ -0.62
XCR1-201ENST00000309285 KLHL34Q8N239 644 aa11.18□□□□□ -0.62
XCR1-201ENST00000309285 IL13P35225 146 aa11.18□□□□□ -0.62
XCR1-201ENST00000309285 TTC5Q8N0Z6 440 aa11.18□□□□□ -0.62
XCR1-201ENST00000309285 USHBP1Q8N6Y0 703 aa11.18□□□□□ -0.62
XCR1-201ENST00000309285 PHF8Q9UPP1 1060 aa11.18□□□□□ -0.62
XCR1-201ENST00000309285 PATL2C9JE40 543 aaKnown RBP11.18□□□□□ -0.62
XCR1-201ENST00000309285 PES1O00541 588 aaKnown RBP11.18□□□□□ -0.62
XCR1-201ENST00000309285 FOXO3O43524 673 aa11.18□□□□□ -0.62
XCR1-201ENST00000309285 CCDC30Q5VVM6 783 aa11.18□□□□□ -0.62
XCR1-201ENST00000309285 CAVIN1Q6NZI2 390 aaKnown RBP11.18□□□□□ -0.62
XCR1-201ENST00000309285 ERICH4A6NGS2 130 aa11.17□□□□□ -0.62
XCR1-201ENST00000309285 EDC4Q6P2E9 1401 aaKnown RBP11.17□□□□□ -0.62
XCR1-201ENST00000309285 VAMP4O75379 141 aa11.17□□□□□ -0.62
XCR1-201ENST00000309285 KCNA6P17658 529 aa11.17□□□□□ -0.62
XCR1-201ENST00000309285 C9orf78Q9NZ63 289 aaPredicted RBP11.17□□□□□ -0.62
XCR1-201ENST00000309285 CCDC34Q96HJ3 373 aa11.17□□□□□ -0.62
XCR1-201ENST00000309285 KRT24Q2M2I5 525 aa11.17□□□□□ -0.62
XCR1-201ENST00000309285 PLEKHF1Q96S99 279 aa11.17□□□□□ -0.62
XCR1-201ENST00000309285 VWDEQ8N2E2 1590 aa11.16□□□□□ -0.62
XCR1-201ENST00000309285 ATF3P18847 181 aa11.16□□□□□ -0.62
XCR1-201ENST00000309285 HDGFL1Q5TGJ6 251 aa11.16□□□□□ -0.62
XCR1-201ENST00000309285 NLRP2Q9NX02 1062 aa11.16□□□□□ -0.62
XCR1-201ENST00000309285 NEFHP12036 1026 aa11.16□□□□□ -0.62
XCR1-201ENST00000309285 MEX3CQ5U5Q3 659 aaKnown RBP11.16□□□□□ -0.62
XCR1-201ENST00000309285 PLCD3Q8N3E9 789 aa11.16□□□□□ -0.62
XCR1-201ENST00000309285 TBX22Q9Y458 520 aa11.16□□□□□ -0.62
XCR1-201ENST00000309285 DIP2CQ9Y2E4 1556 aa11.16□□□□□ -0.62
XCR1-201ENST00000309285 GLI2P10070 1586 aa11.16□□□□□ -0.62
XCR1-201ENST00000309285 IQGAP1P46940 1657 aa11.15□□□□□ -0.62
XCR1-201ENST00000309285 GNAT3A8MTJ3 354 aa11.15□□□□□ -0.62
XCR1-201ENST00000309285 NEXNQ0ZGT2 675 aa11.15□□□□□ -0.62
XCR1-201ENST00000309285 ZSCAN30Q86W11 494 aa11.15□□□□□ -0.62
XCR1-201ENST00000309285 F6X3S4 739 aa11.15□□□□□ -0.62
XCR1-201ENST00000309285 TRERF1Q96PN7 1200 aa11.15□□□□□ -0.62
XCR1-201ENST00000309285 TAF3Q5VWG9 929 aa11.15□□□□□ -0.62
XCR1-201ENST00000309285 ZNF530Q6P9A1 599 aaPredicted RBP11.15□□□□□ -0.62
XCR1-201ENST00000309285 AEBP2Q6ZN18 517 aaPredicted RBP11.15□□□□□ -0.62
XCR1-201ENST00000309285 DEPDC5O75140 1603 aa11.15□□□□□ -0.62
XCR1-201ENST00000309285 MAP3K19Q56UN5 1328 aa11.15□□□□□ -0.63
XCR1-201ENST00000309285 TPM4P67936 248 aa11.14□□□□□ -0.63
XCR1-201ENST00000309285 HDAC1Q13547 482 aaPredicted RBP11.14□□□□□ -0.63
XCR1-201ENST00000309285 RAPGEF4Q8WZA2 1011 aa11.14□□□□□ -0.63
XCR1-201ENST00000309285 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.14□□□□□ -0.63
XCR1-201ENST00000309285 MCM4P33991 863 aa11.14□□□□□ -0.63
XCR1-201ENST00000309285 SAMD1Q6SPF0 538 aaPredicted RBP11.14□□□□□ -0.63
XCR1-201ENST00000309285 SETBP1Q9Y6X0 1596 aa11.14□□□□□ -0.63
XCR1-201ENST00000309285 UBTFL1P0CB47 393 aaPredicted RBP11.14□□□□□ -0.63
XCR1-201ENST00000309285 MRPL50Q8N5N7 158 aaKnown RBP11.14□□□□□ -0.63
XCR1-201ENST00000309285 CDC45O75419 566 aa11.14□□□□□ -0.63
XCR1-201ENST00000309285 GNAI3P08754 354 aa11.14□□□□□ -0.63
XCR1-201ENST00000309285 ZBTB40Q9NUA8 1239 aa11.14□□□□□ -0.63
XCR1-201ENST00000309285 TTC21AQ8NDW8 1320 aa11.13□□□□□ -0.63
XCR1-201ENST00000309285 SEC24BO95487 1268 aa11.13□□□□□ -0.63
XCR1-201ENST00000309285 FBXW7Q969H0 707 aa11.13□□□□□ -0.63
XCR1-201ENST00000309285 PLEKHO1Q53GL0 409 aaPredicted RBP11.13□□□□□ -0.63
XCR1-201ENST00000309285 A2ML1A8K2U0 1454 aa11.13□□□□□ -0.63
XCR1-201ENST00000309285 GOLGA6L19H0YKK7 550 aa11.13□□□□□ -0.63
XCR1-201ENST00000309285 H3BQV1 296 aa11.13□□□□□ -0.63
XCR1-201ENST00000309285 GNAI2P04899 355 aa11.13□□□□□ -0.63
XCR1-201ENST00000309285 ZC3H6P61129 1189 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms