RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 TSPYL6Q8N831 410 aa15.92■□□□□ 0.14
DDX54-201ENST00000306014 PKNOX2Q96KN3 472 aa15.92■□□□□ 0.14
DDX54-201ENST00000306014 CCDC73Q6ZRK6 1079 aa15.92■□□□□ 0.14
DDX54-201ENST00000306014 C16orf71Q8IYS4 520 aaPredicted RBP15.92■□□□□ 0.14
DDX54-201ENST00000306014 ZNF771Q7L3S4 317 aaPredicted RBP15.91■□□□□ 0.14
DDX54-201ENST00000306014 TTC5Q8N0Z6 440 aa15.91■□□□□ 0.14
DDX54-201ENST00000306014 ARHGAP45Q92619 1136 aa15.91■□□□□ 0.14
DDX54-201ENST00000306014 PDCP20941 246 aa15.91■□□□□ 0.14
DDX54-201ENST00000306014 C8orf58Q8NAV2 365 aa15.91■□□□□ 0.14
DDX54-201ENST00000306014 ERCC6L2Q5T890 1561 aa15.91■□□□□ 0.14
DDX54-201ENST00000306014 SDSP20132 328 aa15.91■□□□□ 0.14
DDX54-201ENST00000306014 MAGI2Q86UL8 1455 aa15.91■□□□□ 0.14
DDX54-201ENST00000306014 CEBPZQ03701 1054 aaKnown RBP15.9■□□□□ 0.14
DDX54-201ENST00000306014 STK3Q13188 491 aa15.9■□□□□ 0.14
DDX54-201ENST00000306014 MRPL50Q8N5N7 158 aaKnown RBP15.9■□□□□ 0.14
DDX54-201ENST00000306014 CPLX1O14810 134 aa15.9■□□□□ 0.14
DDX54-201ENST00000306014 RAB3GAP1Q15042 981 aa15.9■□□□□ 0.14
DDX54-201ENST00000306014 CREBRFQ8IUR6 639 aa15.9■□□□□ 0.14
DDX54-201ENST00000306014 JAKMIP1Q96N16 626 aaKnown RBP15.9■□□□□ 0.14
DDX54-201ENST00000306014 NEUROD6Q96NK8 337 aa15.9■□□□□ 0.14
DDX54-201ENST00000306014 CCDC192P0DO97 292 aa15.9■□□□□ 0.14
DDX54-201ENST00000306014 LARP1BQ659C4 914 aaKnown RBP15.9■□□□□ 0.14
DDX54-201ENST00000306014 ZSCAN23Q3MJ62 389 aa15.89■□□□□ 0.14
DDX54-201ENST00000306014 MEIS3Q99687 375 aa15.89■□□□□ 0.14
DDX54-201ENST00000306014 LARP6Q9BRS8 491 aaKnown RBP15.89■□□□□ 0.14
DDX54-201ENST00000306014 VAMP4O75379 141 aa15.89■□□□□ 0.13
DDX54-201ENST00000306014 SIL1Q9H173 461 aa15.89■□□□□ 0.13
DDX54-201ENST00000306014 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.88■□□□□ 0.13
DDX54-201ENST00000306014 TPM3P06753 285 aa15.88■□□□□ 0.13
DDX54-201ENST00000306014 HOMER1Q86YM7 354 aa15.88■□□□□ 0.13
DDX54-201ENST00000306014 DDX54Q8TDD1 881 aaKnown RBP15.88■□□□□ 0.13
DDX54-201ENST00000306014 PHACTR3Q96KR7 559 aa15.88■□□□□ 0.13
DDX54-201ENST00000306014 ZNF521Q96K83 1311 aa15.88■□□□□ 0.13
DDX54-201ENST00000306014 KRT85P78386 507 aa15.88■□□□□ 0.13
DDX54-201ENST00000306014 SDF4Q9BRK5 362 aa15.88■□□□□ 0.13
DDX54-201ENST00000306014 CASTP20810 708 aaKnown RBP15.88■□□□□ 0.13
DDX54-201ENST00000306014 FERMT3Q86UX7 667 aa15.88■□□□□ 0.13
DDX54-201ENST00000306014 CCAR2Q8N163 923 aaKnown RBP15.88■□□□□ 0.13
DDX54-201ENST00000306014 WASLO00401 505 aaPredicted RBP15.87■□□□□ 0.13
DDX54-201ENST00000306014 TPD52L1Q16890 204 aaPredicted RBP15.87■□□□□ 0.13
DDX54-201ENST00000306014 CHMP4CQ96CF2 233 aa15.87■□□□□ 0.13
DDX54-201ENST00000306014 PDRG1Q9NUG6 133 aa15.87■□□□□ 0.13
DDX54-201ENST00000306014 LRRFIP2Q9Y608 721 aaKnown RBP15.87■□□□□ 0.13
DDX54-201ENST00000306014 TRMT2AQ8IZ69 625 aaKnown RBP15.87■□□□□ 0.13
DDX54-201ENST00000306014 DNAJC2Q99543 621 aaKnown RBP15.87■□□□□ 0.13
DDX54-201ENST00000306014 POLKQ9UBT6 870 aa15.87■□□□□ 0.13
DDX54-201ENST00000306014 ADGBQ8N7X0 1667 aa15.87■□□□□ 0.13
DDX54-201ENST00000306014 ESCO1Q5FWF5 840 aa15.87■□□□□ 0.13
DDX54-201ENST00000306014 AEBP1Q8IUX7 1158 aa15.87■□□□□ 0.13
DDX54-201ENST00000306014 CCDC34Q96HJ3 373 aa15.87■□□□□ 0.13
DDX54-201ENST00000306014 NPHP1O15259 732 aa15.86■□□□□ 0.13
DDX54-201ENST00000306014 CCDC83Q8IWF9 413 aa15.86■□□□□ 0.13
DDX54-201ENST00000306014 TNMDQ9H2S6 317 aa15.86■□□□□ 0.13
DDX54-201ENST00000306014 USP25Q9UHP3 1055 aa15.86■□□□□ 0.13
DDX54-201ENST00000306014 MBD5Q9P267 1494 aa15.86■□□□□ 0.13
DDX54-201ENST00000306014 AACSQ86V21 672 aa15.86■□□□□ 0.13
DDX54-201ENST00000306014 BCORL1Q5H9F3 1711 aa15.86■□□□□ 0.13
DDX54-201ENST00000306014 TNRQ92752 1358 aa15.85■□□□□ 0.13
DDX54-201ENST00000306014 TMX3Q96JJ7 454 aa15.85■□□□□ 0.13
DDX54-201ENST00000306014 ERC1Q8IUD2 1116 aa15.85■□□□□ 0.13
DDX54-201ENST00000306014 PTPRCP08575 1304 aa15.85■□□□□ 0.13
DDX54-201ENST00000306014 TULP1O00294 542 aaPredicted RBP15.85■□□□□ 0.13
DDX54-201ENST00000306014 RBM25P49756 843 aaKnown RBP15.85■□□□□ 0.13
DDX54-201ENST00000306014 ANKRD44Q8N8A2 993 aa15.85■□□□□ 0.13
DDX54-201ENST00000306014 TRIM35Q9UPQ4 493 aa15.85■□□□□ 0.13
DDX54-201ENST00000306014 NEO1Q92859 1461 aa15.85■□□□□ 0.13
DDX54-201ENST00000306014 GNAT3A8MTJ3 354 aa15.85■□□□□ 0.13
DDX54-201ENST00000306014 ZBTB7BO15156 539 aaPredicted RBP15.85■□□□□ 0.13
DDX54-201ENST00000306014 APPP05067 770 aa15.85■□□□□ 0.13
DDX54-201ENST00000306014 KRT24Q2M2I5 525 aa15.85■□□□□ 0.13
DDX54-201ENST00000306014 A0A1W2PP64 1363 aa15.84■□□□□ 0.13
DDX54-201ENST00000306014 HIP1O00291 1037 aa15.84■□□□□ 0.13
DDX54-201ENST00000306014 CPLX2Q6PUV4 134 aaKnown RBP15.84■□□□□ 0.13
DDX54-201ENST00000306014 BLOC1S2Q6QNY1 142 aa15.84■□□□□ 0.13
DDX54-201ENST00000306014 FLIIQ13045 1269 aa15.84■□□□□ 0.13
DDX54-201ENST00000306014 KIF1BPQ96EK5 621 aa15.84■□□□□ 0.13
DDX54-201ENST00000306014 FMNL2Q96PY5 1086 aa15.84■□□□□ 0.13
DDX54-201ENST00000306014 ZRANB1Q9UGI0 708 aa15.84■□□□□ 0.13
DDX54-201ENST00000306014 KINO60870 393 aaKnown RBP15.84■□□□□ 0.13
DDX54-201ENST00000306014 ZGPATQ8N5A5 531 aaKnown RBP15.84■□□□□ 0.13
DDX54-201ENST00000306014 RAPGEF4Q8WZA2 1011 aa15.84■□□□□ 0.13
DDX54-201ENST00000306014 ZNF530Q6P9A1 599 aaPredicted RBP15.83■□□□□ 0.13
DDX54-201ENST00000306014 UBE2Q2Q8WVN8 375 aa15.83■□□□□ 0.13
DDX54-201ENST00000306014 PRPF40BQ6NWY9 871 aaKnown RBP15.83■□□□□ 0.12
DDX54-201ENST00000306014 PLEKHM2Q8IWE5 1019 aa15.83■□□□□ 0.12
DDX54-201ENST00000306014 ATP7AQ04656 1500 aa15.83■□□□□ 0.12
DDX54-201ENST00000306014 PRIM1P49642 420 aaKnown RBP15.83■□□□□ 0.12
DDX54-201ENST00000306014 CAMK4Q16566 473 aa15.83■□□□□ 0.12
DDX54-201ENST00000306014 SYNE3Q6ZMZ3 975 aa15.83■□□□□ 0.12
DDX54-201ENST00000306014 LRRFIP1Q32MZ4 808 aaKnown RBP15.82■□□□□ 0.12
DDX54-201ENST00000306014 NUP62CLQ9H1M0 184 aa15.82■□□□□ 0.12
DDX54-201ENST00000306014 DCTPP1Q9H773 170 aa15.82■□□□□ 0.12
DDX54-201ENST00000306014 NLRP2Q9NX02 1062 aa15.82■□□□□ 0.12
DDX54-201ENST00000306014 PDE1AP54750 535 aa15.82■□□□□ 0.12
DDX54-201ENST00000306014 PLEKHO1Q53GL0 409 aaPredicted RBP15.82■□□□□ 0.12
DDX54-201ENST00000306014 WASHC4Q2M389 1173 aa15.82■□□□□ 0.12
DDX54-201ENST00000306014 CCDC183Q5T5S1 534 aa15.82■□□□□ 0.12
DDX54-201ENST00000306014 SPATA32Q96LK8 384 aa15.82■□□□□ 0.12
DDX54-201ENST00000306014 SPG7Q9UQ90 795 aa15.82■□□□□ 0.12
DDX54-201ENST00000306014 PDCL3Q9H2J4 239 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms