RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 EYA1Q99502 592 aa15.5■□□□□ 0.07
TPM3-202ENST00000302206 EXOSC9Q06265 439 aaKnown RBP15.49■□□□□ 0.07
TPM3-202ENST00000302206 NPHP3Q7Z494 1330 aa15.48■□□□□ 0.07
TPM3-202ENST00000302206 EP400Q96L91 3159 aa15.48■□□□□ 0.07
TPM3-202ENST00000302206 AAMPQ13685 434 aa15.48■□□□□ 0.07
TPM3-202ENST00000302206 C20orf194Q5TEA3 1177 aa15.48■□□□□ 0.07
TPM3-202ENST00000302206 TSR2Q969E8 191 aaKnown RBP15.48■□□□□ 0.07
TPM3-202ENST00000302206 HTATSF1O43719 755 aaKnown RBP15.47■□□□□ 0.07
TPM3-202ENST00000302206 GCP02774 474 aa15.47■□□□□ 0.07
TPM3-202ENST00000302206 MS4A1P11836 297 aa15.47■□□□□ 0.07
TPM3-202ENST00000302206 ALDH1L2Q3SY69 923 aa15.47■□□□□ 0.07
TPM3-202ENST00000302206 ARHGEF25Q86VW2 580 aa15.47■□□□□ 0.07
TPM3-202ENST00000302206 CFAP44Q96MT7 982 aa15.47■□□□□ 0.07
TPM3-202ENST00000302206 GAS2L2Q8NHY3 880 aa15.46■□□□□ 0.07
TPM3-202ENST00000302206 ATRNO75882 1429 aa15.45■□□□□ 0.06
TPM3-202ENST00000302206 NCAPD2Q15021 1401 aa15.45■□□□□ 0.06
TPM3-202ENST00000302206 ABCC6O95255 1503 aa15.45■□□□□ 0.06
TPM3-202ENST00000302206 BRPF1P55201 1214 aaPredicted RBP15.45■□□□□ 0.06
TPM3-202ENST00000302206 FNBP4Q8N3X1 1017 aaPredicted RBP15.45■□□□□ 0.06
TPM3-202ENST00000302206 PXDNQ92626 1479 aa15.45■□□□□ 0.06
TPM3-202ENST00000302206 TNS3Q68CZ2 1445 aa15.44■□□□□ 0.06
TPM3-202ENST00000302206 CANXP27824 592 aaKnown RBP15.44■□□□□ 0.06
TPM3-202ENST00000302206 FOXD4L1Q9NU39 408 aa15.44■□□□□ 0.06
TPM3-202ENST00000302206 CAMTA1Q9Y6Y1 1673 aa15.44■□□□□ 0.06
TPM3-202ENST00000302206 XPCQ01831 940 aaPredicted RBP15.43■□□□□ 0.06
TPM3-202ENST00000302206 MTHFSDQ2M296 383 aaKnown RBP15.42■□□□□ 0.06
TPM3-202ENST00000302206 THUMPD2Q9BTF0 503 aaKnown RBP15.42■□□□□ 0.06
TPM3-202ENST00000302206 TSHZ2Q9NRE2 1034 aa15.42■□□□□ 0.06
TPM3-202ENST00000302206 MBIPQ9NS73 344 aa15.42■□□□□ 0.06
TPM3-202ENST00000302206 CRB1P82279 1406 aa15.42■□□□□ 0.06
TPM3-202ENST00000302206 SOS2Q07890 1332 aaPredicted RBP15.42■□□□□ 0.06
TPM3-202ENST00000302206 KIF16BQ96L93 1317 aa15.42■□□□□ 0.06
TPM3-202ENST00000302206 CHL1O00533 1208 aa15.41■□□□□ 0.06
TPM3-202ENST00000302206 HAP1P54257 671 aaPredicted RBP15.41■□□□□ 0.06
TPM3-202ENST00000302206 ZKSCAN2Q63HK3 967 aa15.41■□□□□ 0.06
TPM3-202ENST00000302206 SSH1Q8WYL5 1049 aa15.41■□□□□ 0.06
TPM3-202ENST00000302206 SMC4Q9NTJ3 1288 aa15.41■□□□□ 0.06
TPM3-202ENST00000302206 LRRC37A3O60309 1634 aa15.41■□□□□ 0.06
TPM3-202ENST00000302206 LRP5O75197 1615 aa15.41■□□□□ 0.06
TPM3-202ENST00000302206 COL22A1Q8NFW1 1626 aaPredicted RBP15.41■□□□□ 0.06
TPM3-202ENST00000302206 SPATA31A3Q5VYP0 1347 aa15.41■□□□□ 0.06
TPM3-202ENST00000302206 CRYBG1Q9Y4K1 1723 aa15.4■□□□□ 0.06
TPM3-202ENST00000302206 KIAA0232Q92628 1395 aa15.4■□□□□ 0.06
TPM3-202ENST00000302206 LAS1LQ9Y4W2 734 aaKnown RBP15.4■□□□□ 0.06
TPM3-202ENST00000302206 PLEKHG2Q9H7P9 1386 aa15.39■□□□□ 0.05
TPM3-202ENST00000302206 FAM83GA6ND36 823 aa15.39■□□□□ 0.05
TPM3-202ENST00000302206 IPO8O15397 1037 aaKnown RBP15.39■□□□□ 0.05
TPM3-202ENST00000302206 VAMP4O75379 141 aa15.39■□□□□ 0.05
TPM3-202ENST00000302206 LMOD2Q6P5Q4 547 aa15.39■□□□□ 0.05
TPM3-202ENST00000302206 RTF1Q92541 710 aaKnown RBP15.39■□□□□ 0.05
TPM3-202ENST00000302206 FRAT1Q92837 279 aaPredicted RBP15.39■□□□□ 0.05
TPM3-202ENST00000302206 BABAM1Q9NWV8 329 aa15.39■□□□□ 0.05
TPM3-202ENST00000302206 GNAT3A8MTJ3 354 aa15.38■□□□□ 0.05
TPM3-202ENST00000302206 LTV1Q96GA3 475 aaPredicted RBP15.38■□□□□ 0.05
TPM3-202ENST00000302206 KDM2BQ8NHM5 1336 aa15.38■□□□□ 0.05
TPM3-202ENST00000302206 LMO7Q8WWI1 1683 aa15.38■□□□□ 0.05
TPM3-202ENST00000302206 CPDO75976 1380 aa15.37■□□□□ 0.05
TPM3-202ENST00000302206 MAP3K5Q99683 1374 aa15.37■□□□□ 0.05
TPM3-202ENST00000302206 SF3B2Q13435 895 aaKnown RBP15.37■□□□□ 0.05
TPM3-202ENST00000302206 DCTN1Q14203 1278 aa15.37■□□□□ 0.05
TPM3-202ENST00000302206 NBPF6Q5VWK0 638 aa15.37■□□□□ 0.05
TPM3-202ENST00000302206 CENPQQ7L2Z9 268 aaPredicted RBP15.37■□□□□ 0.05
TPM3-202ENST00000302206 DZIP1LQ8IYY4 767 aaKnown RBP15.37■□□□□ 0.05
TPM3-202ENST00000302206 PANK1Q8TE04 598 aa15.37■□□□□ 0.05
TPM3-202ENST00000302206 ARHGAP45Q92619 1136 aa15.37■□□□□ 0.05
TPM3-202ENST00000302206 GJD4Q96KN9 370 aaPredicted RBP15.37■□□□□ 0.05
TPM3-202ENST00000302206 NBPF4Q96M43 638 aa15.37■□□□□ 0.05
TPM3-202ENST00000302206 COL18A1P39060 1754 aa15.36■□□□□ 0.05
TPM3-202ENST00000302206 FAM208AQ9UK61 1670 aaKnown RBP15.36■□□□□ 0.05
TPM3-202ENST00000302206 BCL9LQ86UU0 1499 aa15.36■□□□□ 0.05
TPM3-202ENST00000302206 TWISTNBQ3B726 338 aaPredicted RBP15.36■□□□□ 0.05
TPM3-202ENST00000302206 ATF7IPQ6VMQ6 1270 aa15.36■□□□□ 0.05
TPM3-202ENST00000302206 MCM10Q7L590 875 aa15.36■□□□□ 0.05
TPM3-202ENST00000302206 ANKRD24Q8TF21 1146 aa15.36■□□□□ 0.05
TPM3-202ENST00000302206 BCL2L13Q9BXK5 485 aa15.36■□□□□ 0.05
TPM3-202ENST00000302206 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.36■□□□□ 0.05
TPM3-202ENST00000302206 RGPD2P0DJD1 1756 aa15.35■□□□□ 0.05
TPM3-202ENST00000302206 AMOTQ4VCS5 1084 aa15.35■□□□□ 0.05
TPM3-202ENST00000302206 MRPL50Q8N5N7 158 aaKnown RBP15.35■□□□□ 0.05
TPM3-202ENST00000302206 CLUAP1Q96AJ1 413 aa15.35■□□□□ 0.05
TPM3-202ENST00000302206 COG6Q9Y2V7 657 aa15.35■□□□□ 0.05
TPM3-202ENST00000302206 SOS1Q07889 1333 aaPredicted RBP15.35■□□□□ 0.05
TPM3-202ENST00000302206 RLBP1P12271 317 aa15.34■□□□□ 0.05
TPM3-202ENST00000302206 MVPQ14764 893 aaKnown RBP15.34■□□□□ 0.05
TPM3-202ENST00000302206 C8orf58Q8NAV2 365 aa15.34■□□□□ 0.05
TPM3-202ENST00000302206 NOB1Q9ULX3 412 aaKnown RBP15.34■□□□□ 0.05
TPM3-202ENST00000302206 OVOS2A0A0G2JMS6 1433 aa15.34■□□□□ 0.05
TPM3-202ENST00000302206 ZBTB7CA1YPR0 619 aa15.33■□□□□ 0.04
TPM3-202ENST00000302206 TRIM27P14373 513 aa15.33■□□□□ 0.04
TPM3-202ENST00000302206 PLEKHO1Q53GL0 409 aaPredicted RBP15.33■□□□□ 0.04
TPM3-202ENST00000302206 DEFB132Q7Z7B7 95 aa15.33■□□□□ 0.04
TPM3-202ENST00000302206 FTSJ3Q8IY81 847 aaKnown RBP15.33■□□□□ 0.04
TPM3-202ENST00000302206 TSPYL6Q8N831 410 aa15.33■□□□□ 0.04
TPM3-202ENST00000302206 ERBB3P21860 1342 aa15.33■□□□□ 0.04
TPM3-202ENST00000302206 BRWD3Q6RI45 1802 aa15.33■□□□□ 0.04
TPM3-202ENST00000302206 USHBP1Q8N6Y0 703 aa15.32■□□□□ 0.04
TPM3-202ENST00000302206 AXIN2Q9Y2T1 843 aa15.32■□□□□ 0.04
TPM3-202ENST00000302206 CEMIPQ8WUJ3 1361 aa15.32■□□□□ 0.04
TPM3-202ENST00000302206 RGPD5Q99666 1765 aa15.31■□□□□ 0.04
TPM3-202ENST00000302206 TCERG1O14776 1098 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms