RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 FILIP1Q7Z7B0 1213 aa16.01■□□□□ 0.15
CHRFAM7A-201ENST00000299847 SPG7Q9UQ90 795 aa16.01■□□□□ 0.15
CHRFAM7A-201ENST00000299847 CCP110O43303 1012 aa16.01■□□□□ 0.15
CHRFAM7A-201ENST00000299847 SEPT7Q16181 437 aaKnown RBP16.01■□□□□ 0.15
CHRFAM7A-201ENST00000299847 TMEM57Q8N5G2 664 aa16.01■□□□□ 0.15
CHRFAM7A-201ENST00000299847 DHX8Q14562 1220 aaKnown RBP16.01■□□□□ 0.15
CHRFAM7A-201ENST00000299847 FERMT3Q86UX7 667 aa16■□□□□ 0.15
CHRFAM7A-201ENST00000299847 LRP2BPQ9P2M1 347 aa16■□□□□ 0.15
CHRFAM7A-201ENST00000299847 ERICH4A6NGS2 130 aa16■□□□□ 0.15
CHRFAM7A-201ENST00000299847 PDE3AQ14432 1141 aa16■□□□□ 0.15
CHRFAM7A-201ENST00000299847 ANKRD1Q15327 319 aa16■□□□□ 0.15
CHRFAM7A-201ENST00000299847 ZNF76P36508 570 aa16■□□□□ 0.15
CHRFAM7A-201ENST00000299847 SSR1P43307 286 aaKnown RBP16■□□□□ 0.15
CHRFAM7A-201ENST00000299847 STIM1Q13586 685 aa16■□□□□ 0.15
CHRFAM7A-201ENST00000299847 JMYQ8N9B5 988 aa16■□□□□ 0.15
CHRFAM7A-201ENST00000299847 UBAC1Q9BSL1 405 aa16■□□□□ 0.15
CHRFAM7A-201ENST00000299847 GUCY1B3Q02153 619 aa16■□□□□ 0.15
CHRFAM7A-201ENST00000299847 BACH2Q9BYV9 841 aa16■□□□□ 0.15
CHRFAM7A-201ENST00000299847 LRRFIP2Q9Y608 721 aaKnown RBP16■□□□□ 0.15
CHRFAM7A-201ENST00000299847 SYCE3A1L190 88 aa15.99■□□□□ 0.15
CHRFAM7A-201ENST00000299847 CCDC83Q8IWF9 413 aa15.99■□□□□ 0.15
CHRFAM7A-201ENST00000299847 ABCF2Q9UG63 623 aa15.99■□□□□ 0.15
CHRFAM7A-201ENST00000299847 TAF3Q5VWG9 929 aa15.99■□□□□ 0.15
CHRFAM7A-201ENST00000299847 RTEL1-TNFRSF6BF6WH68 1400 aa15.99■□□□□ 0.15
CHRFAM7A-201ENST00000299847 GOLGA6L10A6NI86 522 aa15.99■□□□□ 0.15
CHRFAM7A-201ENST00000299847 CCDC112Q8NEF3 446 aa15.99■□□□□ 0.15
CHRFAM7A-201ENST00000299847 ERBINQ96RT1 1412 aa15.98■□□□□ 0.15
CHRFAM7A-201ENST00000299847 ERLIN2O94905 339 aa15.98■□□□□ 0.15
CHRFAM7A-201ENST00000299847 DACH1Q9UI36 760 aa15.98■□□□□ 0.15
CHRFAM7A-201ENST00000299847 NUP62CLQ9H1M0 184 aa15.98■□□□□ 0.15
CHRFAM7A-201ENST00000299847 NOL7Q9UMY1 257 aaKnown RBP15.98■□□□□ 0.15
CHRFAM7A-201ENST00000299847 CCDC82Q8N4S0 544 aa15.97■□□□□ 0.15
CHRFAM7A-201ENST00000299847 SLC4A8Q2Y0W8 1093 aa15.97■□□□□ 0.15
CHRFAM7A-201ENST00000299847 PTCD1O75127 700 aaKnown RBP15.97■□□□□ 0.15
CHRFAM7A-201ENST00000299847 CEP57L1Q8IYX8 460 aa15.97■□□□□ 0.15
CHRFAM7A-201ENST00000299847 PIP4K2AP48426 406 aaPredicted RBP15.96■□□□□ 0.15
CHRFAM7A-201ENST00000299847 PRPF40BQ6NWY9 871 aaKnown RBP15.96■□□□□ 0.15
CHRFAM7A-201ENST00000299847 UPF3BQ9BZI7 483 aaKnown RBP15.96■□□□□ 0.15
CHRFAM7A-201ENST00000299847 MINDY4BA8MYZ0 360 aa15.96■□□□□ 0.15
CHRFAM7A-201ENST00000299847 DNA2P51530 1060 aa15.95■□□□□ 0.14
CHRFAM7A-201ENST00000299847 KIAA1328Q86T90 577 aa15.95■□□□□ 0.14
CHRFAM7A-201ENST00000299847 BOLA2Q9H3K6 86 aa15.95■□□□□ 0.14
CHRFAM7A-201ENST00000299847 SCAPERQ9BY12 1400 aa15.95■□□□□ 0.14
CHRFAM7A-201ENST00000299847 PPFIA3O75145 1194 aa15.95■□□□□ 0.14
CHRFAM7A-201ENST00000299847 SF3B2Q13435 895 aaKnown RBP15.95■□□□□ 0.14
CHRFAM7A-201ENST00000299847 ZSCAN25Q6NSZ9 544 aa15.95■□□□□ 0.14
CHRFAM7A-201ENST00000299847 AIDAQ96BJ3 306 aa15.95■□□□□ 0.14
CHRFAM7A-201ENST00000299847 KLHL10Q6JEL2 608 aa15.95■□□□□ 0.14
CHRFAM7A-201ENST00000299847 MYD88Q99836 296 aa15.95■□□□□ 0.14
CHRFAM7A-201ENST00000299847 CCDC102AQ96A19 550 aa15.95■□□□□ 0.14
CHRFAM7A-201ENST00000299847 METTL24Q5JXM2 366 aa15.94■□□□□ 0.14
CHRFAM7A-201ENST00000299847 PRDM11Q9NQV5 511 aa15.94■□□□□ 0.14
CHRFAM7A-201ENST00000299847 CEP126Q9P2H0 1117 aa15.94■□□□□ 0.14
CHRFAM7A-201ENST00000299847 EIF5P55010 431 aaKnown RBP15.94■□□□□ 0.14
CHRFAM7A-201ENST00000299847 WDR63Q8IWG1 891 aa15.94■□□□□ 0.14
CHRFAM7A-201ENST00000299847 ZNF219Q9P2Y4 722 aaPredicted RBP15.94■□□□□ 0.14
CHRFAM7A-201ENST00000299847 RAPGEF3O95398 923 aa15.94■□□□□ 0.14
CHRFAM7A-201ENST00000299847 PNISRQ8TF01 805 aaKnown RBP15.94■□□□□ 0.14
CHRFAM7A-201ENST00000299847 C20orf194Q5TEA3 1177 aa15.94■□□□□ 0.14
CHRFAM7A-201ENST00000299847 C9orf84Q5VXU9 1444 aa15.93■□□□□ 0.14
CHRFAM7A-201ENST00000299847 NSD3Q9BZ95 1437 aa15.93■□□□□ 0.14
CHRFAM7A-201ENST00000299847 CBFA2T2O43439 604 aa15.93■□□□□ 0.14
CHRFAM7A-201ENST00000299847 F6X3S4 739 aa15.93■□□□□ 0.14
CHRFAM7A-201ENST00000299847 CASKIN1Q8WXD9 1431 aa15.93■□□□□ 0.14
CHRFAM7A-201ENST00000299847 WAPLQ7Z5K2 1190 aa15.93■□□□□ 0.14
CHRFAM7A-201ENST00000299847 CFAP100Q494V2 611 aa15.93■□□□□ 0.14
CHRFAM7A-201ENST00000299847 CCDC66A2RUB6 948 aa15.92■□□□□ 0.14
CHRFAM7A-201ENST00000299847 TRMT1LQ7Z2T5 733 aaKnown RBP15.92■□□□□ 0.14
CHRFAM7A-201ENST00000299847 GNAT3A8MTJ3 354 aa15.92■□□□□ 0.14
CHRFAM7A-201ENST00000299847 IGHMBP2P38935 993 aaKnown RBP15.92■□□□□ 0.14
CHRFAM7A-201ENST00000299847 IMMTQ16891 758 aaKnown RBP15.92■□□□□ 0.14
CHRFAM7A-201ENST00000299847 KIAA0754O94854 1291 aa15.92■□□□□ 0.14
CHRFAM7A-201ENST00000299847 UBA5Q9GZZ9 404 aa15.92■□□□□ 0.14
CHRFAM7A-201ENST00000299847 PRDM10Q9NQV6 1147 aa15.92■□□□□ 0.14
CHRFAM7A-201ENST00000299847 PRG4Q92954 1404 aaPredicted RBP15.92■□□□□ 0.14
CHRFAM7A-201ENST00000299847 DUSP27Q5VZP5 1158 aa15.92■□□□□ 0.14
CHRFAM7A-201ENST00000299847 CCDC8Q9H0W5 538 aaPredicted RBP15.92■□□□□ 0.14
CHRFAM7A-201ENST00000299847 CDKL5O76039 1030 aa15.91■□□□□ 0.14
CHRFAM7A-201ENST00000299847 TMPOP42166 694 aaKnown RBP15.91■□□□□ 0.14
CHRFAM7A-201ENST00000299847 CCDC144CPQ8IYA2 1237 aa15.91■□□□□ 0.14
CHRFAM7A-201ENST00000299847 MCM4P33991 863 aa15.9■□□□□ 0.14
CHRFAM7A-201ENST00000299847 ZNF692Q9BU19 519 aaPredicted RBP15.9■□□□□ 0.14
CHRFAM7A-201ENST00000299847 CFAP45Q9UL16 551 aa15.9■□□□□ 0.14
CHRFAM7A-201ENST00000299847 EPB41L2O43491 1005 aaKnown RBP15.9■□□□□ 0.14
CHRFAM7A-201ENST00000299847 MTERF4Q7Z6M4 381 aaKnown RBP15.9■□□□□ 0.14
CHRFAM7A-201ENST00000299847 RAB11FIP4Q86YS3 637 aa15.9■□□□□ 0.14
CHRFAM7A-201ENST00000299847 PRKCSHP14314 528 aaPredicted RBP15.9■□□□□ 0.14
CHRFAM7A-201ENST00000299847 HMGN5P82970 282 aaKnown RBP15.9■□□□□ 0.14
CHRFAM7A-201ENST00000299847 KIAA1107Q9UPP5 1409 aa15.9■□□□□ 0.14
CHRFAM7A-201ENST00000299847 DCAF8L1A6NGE4 600 aa15.9■□□□□ 0.14
CHRFAM7A-201ENST00000299847 NEBLO76041 1014 aa15.9■□□□□ 0.14
CHRFAM7A-201ENST00000299847 POLR3DP05423 398 aaPredicted RBP15.9■□□□□ 0.14
CHRFAM7A-201ENST00000299847 STAC3Q96MF2 364 aa15.9■□□□□ 0.14
CHRFAM7A-201ENST00000299847 LIG1P18858 919 aa15.89■□□□□ 0.13
CHRFAM7A-201ENST00000299847 TNNT1P13805 278 aa15.89■□□□□ 0.13
CHRFAM7A-201ENST00000299847 LUC7LQ9NQ29 371 aaKnown RBP15.89■□□□□ 0.13
CHRFAM7A-201ENST00000299847 BMP2KQ9NSY1 1161 aaPredicted RBP15.89■□□□□ 0.13
CHRFAM7A-201ENST00000299847 CCDC113Q9H0I3 377 aa15.89■□□□□ 0.13
CHRFAM7A-201ENST00000299847 NFE2L2Q16236 605 aa15.89■□□□□ 0.13
CHRFAM7A-201ENST00000299847 MAP3K11Q16584 847 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms