RNA–Protein interactions for RNA: ENST00000297537.4

GBX1-201, Transcript of gastrulation brain homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GBX1, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBX1-201ENST00000297537 DDX54Q8TDD1 881 aaKnown RBP31.69■■■□□ 2.66
GBX1-201ENST00000297537 BCL11BQ9C0K0 894 aaPredicted RBP31.68■■■□□ 2.66
GBX1-201ENST00000297537 SHANK3Q9BYB0 1731 aa31.67■■■□□ 2.66
GBX1-201ENST00000297537 PTF1AQ7RTS3 328 aa31.67■■■□□ 2.66
GBX1-201ENST00000297537 APBA3O96018 575 aa31.66■■■□□ 2.66
GBX1-201ENST00000297537 EN1Q05925 392 aaPredicted RBP31.66■■■□□ 2.66
GBX1-201ENST00000297537 PPP2R1AP30153 589 aa31.64■■■□□ 2.66
GBX1-201ENST00000297537 CAMKK2Q96RR4 588 aa31.64■■■□□ 2.66
GBX1-201ENST00000297537 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.64■■■□□ 2.66
GBX1-201ENST00000297537 PLEKHG2Q9H7P9 1386 aa31.63■■■□□ 2.65
GBX1-201ENST00000297537 KCNQ2O43526 872 aa31.62■■■□□ 2.65
GBX1-201ENST00000297537 COL3A1P02461 1466 aaPredicted RBP31.61■■■□□ 2.65
GBX1-201ENST00000297537 KDRP35968 1356 aa31.61■■■□□ 2.65
GBX1-201ENST00000297537 PARD3Q8TEW0 1356 aa31.61■■■□□ 2.65
GBX1-201ENST00000297537 DIAPH1O60610 1272 aaKnown RBP31.61■■■□□ 2.65
GBX1-201ENST00000297537 PCDH11XQ9BZA7 1347 aa31.6■■■□□ 2.65
GBX1-201ENST00000297537 PCDH11YQ9BZA8 1340 aa31.6■■■□□ 2.65
GBX1-201ENST00000297537 CYP27B1O15528 508 aa31.6■■■□□ 2.65
GBX1-201ENST00000297537 ACSBG1Q96GR2 724 aa31.6■■■□□ 2.65
GBX1-201ENST00000297537 PKD1L3Q7Z443 1732 aa31.59■■■□□ 2.65
GBX1-201ENST00000297537 PLSCR1O15162 318 aa31.59■■■□□ 2.65
GBX1-201ENST00000297537 EZH2Q15910 746 aaKnown RBP31.59■■■□□ 2.65
GBX1-201ENST00000297537 AEBP1Q8IUX7 1158 aa31.59■■■□□ 2.65
GBX1-201ENST00000297537 SULT6B1Q6IMI4 303 aa31.58■■■□□ 2.65
GBX1-201ENST00000297537 SPG7Q9UQ90 795 aa31.58■■■□□ 2.65
GBX1-201ENST00000297537 NHSQ6T4R5 1651 aa31.56■■■□□ 2.64
GBX1-201ENST00000297537 NKX1-1Q15270 411 aaPredicted RBP31.54■■■□□ 2.64
GBX1-201ENST00000297537 ZNF316A6NFI3 1004 aaPredicted RBP31.53■■■□□ 2.64
GBX1-201ENST00000297537 PRIM1P49642 420 aaKnown RBP31.51■■■□□ 2.63
GBX1-201ENST00000297537 CFAP53Q96M91 514 aa31.51■■■□□ 2.63
GBX1-201ENST00000297537 RALBP1Q15311 655 aa31.5■■■□□ 2.63
GBX1-201ENST00000297537 PHKG2P15735 406 aa31.49■■■□□ 2.63
GBX1-201ENST00000297537 AMOTQ4VCS5 1084 aa31.49■■■□□ 2.63
GBX1-201ENST00000297537 PLEKHO1Q53GL0 409 aaPredicted RBP31.49■■■□□ 2.63
GBX1-201ENST00000297537 IFNL2Q8IZJ0 200 aa31.49■■■□□ 2.63
GBX1-201ENST00000297537 PROM2Q8N271 834 aa31.49■■■□□ 2.63
GBX1-201ENST00000297537 HMOX1P09601 288 aa31.48■■■□□ 2.63
GBX1-201ENST00000297537 RGPD3A6NKT7 1758 aaPredicted RBP31.48■■■□□ 2.63
GBX1-201ENST00000297537 RGPD4Q7Z3J3 1758 aa31.48■■■□□ 2.63
GBX1-201ENST00000297537 KAT6BQ8WYB5 2073 aa31.46■■■□□ 2.63
GBX1-201ENST00000297537 DOT1LQ8TEK3 1739 aa31.46■■■□□ 2.63
GBX1-201ENST00000297537 RREB1Q92766 1687 aa31.44■■■□□ 2.62
GBX1-201ENST00000297537 U2SURPO15042 1029 aaKnown RBP31.44■■■□□ 2.62
GBX1-201ENST00000297537 SYTL4Q96C24 671 aaPredicted RBP31.44■■■□□ 2.62
GBX1-201ENST00000297537 BTAF1O14981 1849 aa31.43■■■□□ 2.62
GBX1-201ENST00000297537 NUDCQ9Y266 331 aa31.41■■■□□ 2.62
GBX1-201ENST00000297537 TXNRD1Q16881 649 aa31.4■■■□□ 2.62
GBX1-201ENST00000297537 ZNF530Q6P9A1 599 aaPredicted RBP31.4■■■□□ 2.62
GBX1-201ENST00000297537 TOGARAM1Q9Y4F4 1720 aa31.39■■■□□ 2.62
GBX1-201ENST00000297537 NUP188Q5SRE5 1749 aa31.38■■■□□ 2.61
GBX1-201ENST00000297537 HSP90AB1P08238 724 aaKnown RBP31.37■■■□□ 2.61
GBX1-201ENST00000297537 DCAF5Q96JK2 942 aa31.36■■■□□ 2.61
GBX1-201ENST00000297537 PRKRIP1Q9H875 184 aaPredicted RBP31.36■■■□□ 2.61
GBX1-201ENST00000297537 MYBBP1AQ9BQG0 1328 aaKnown RBP31.35■■■□□ 2.61
GBX1-201ENST00000297537 MPRIPQ6WCQ1 1025 aa31.35■■■□□ 2.61
GBX1-201ENST00000297537 RSPH6AQ9H0K4 717 aa31.35■■■□□ 2.61
GBX1-201ENST00000297537 MTHFSDQ2M296 383 aaKnown RBP31.34■■■□□ 2.61
GBX1-201ENST00000297537 C1orf141Q5JVX7 400 aa31.34■■■□□ 2.61
GBX1-201ENST00000297537 PIGBQ92521 554 aa31.34■■■□□ 2.61
GBX1-201ENST00000297537 AKAP4Q5JQC9 854 aa31.33■■■□□ 2.61
GBX1-201ENST00000297537 KDM6AO15550 1401 aaPredicted RBP31.32■■■□□ 2.61
GBX1-201ENST00000297537 ERVV-2B6SEH9 535 aa31.32■■■□□ 2.6
GBX1-201ENST00000297537 U2AF1L5P0DN76 240 aaPredicted RBP31.32■■■□□ 2.6
GBX1-201ENST00000297537 U2AF1Q01081 240 aaKnown RBP eCLIP31.32■■■□□ 2.6
GBX1-201ENST00000297537 ITGB4P16144 1822 aa31.32■■■□□ 2.6
GBX1-201ENST00000297537 FCHSD2O94868 740 aa31.31■■■□□ 2.6
GBX1-201ENST00000297537 NBPF14Q5TI25 921 aa31.31■■■□□ 2.6
GBX1-201ENST00000297537 LRRC4BQ9NT99 713 aa31.31■■■□□ 2.6
GBX1-201ENST00000297537 PRKAR2BP31323 418 aa31.29■■■□□ 2.6
GBX1-201ENST00000297537 SLC27A3Q5K4L6 730 aa31.29■■■□□ 2.6
GBX1-201ENST00000297537 R3HDM1Q15032 1099 aaKnown RBP31.28■■■□□ 2.6
GBX1-201ENST00000297537 PHACTR3Q96KR7 559 aa31.28■■■□□ 2.6
GBX1-201ENST00000297537 TMOD3Q9NYL9 352 aa31.28■■■□□ 2.6
GBX1-201ENST00000297537 PSDA5PKW4 1024 aaPredicted RBP31.27■■■□□ 2.6
GBX1-201ENST00000297537 ANO8Q9HCE9 1232 aaPredicted RBP31.27■■■□□ 2.6
GBX1-201ENST00000297537 LY75O60449 1722 aa31.26■■■□□ 2.59
GBX1-201ENST00000297537 SMARCC1Q92922 1105 aaPredicted RBP31.24■■■□□ 2.59
GBX1-201ENST00000297537 SRCAPQ6ZRS2 3230 aa31.23■■■□□ 2.59
GBX1-201ENST00000297537 PALLDQ8WX93 1383 aa31.23■■■□□ 2.59
GBX1-201ENST00000297537 GAS2L2Q8NHY3 880 aa31.23■■■□□ 2.59
GBX1-201ENST00000297537 LGR6Q9HBX8 967 aa31.23■■■□□ 2.59
GBX1-201ENST00000297537 ASAP1Q9ULH1 1129 aa31.22■■■□□ 2.59
GBX1-201ENST00000297537 PAPPAQ13219 1627 aa31.21■■■□□ 2.59
GBX1-201ENST00000297537 RNMTO43148 476 aaKnown RBP31.21■■■□□ 2.59
GBX1-201ENST00000297537 CABP4P57796 275 aa31.21■■■□□ 2.59
GBX1-201ENST00000297537 ATG3Q9NT62 314 aa31.21■■■□□ 2.59
GBX1-201ENST00000297537 KCNQ4P56696 695 aa31.2■■■□□ 2.59
GBX1-201ENST00000297537 NFATC2IPQ8NCF5 419 aa31.2■■■□□ 2.59
GBX1-201ENST00000297537 CCNL1Q9UK58 526 aaPredicted RBP31.2■■■□□ 2.59
GBX1-201ENST00000297537 SCN11AQ9UI33 1791 aa31.2■■■□□ 2.58
GBX1-201ENST00000297537 SLC15A2Q16348 729 aa31.19■■■□□ 2.58
GBX1-201ENST00000297537 PLEKHF1Q96S99 279 aa31.19■■■□□ 2.58
GBX1-201ENST00000297537 ADAMTS7Q9UKP4 1686 aa31.19■■■□□ 2.58
GBX1-201ENST00000297537 GNAT3A8MTJ3 354 aa31.17■■■□□ 2.58
GBX1-201ENST00000297537 STK32BQ9NY57 414 aa31.17■■■□□ 2.58
GBX1-201ENST00000297537 MAP3K5Q99683 1374 aa31.17■■■□□ 2.58
GBX1-201ENST00000297537 AKT1S1Q96B36 256 aa31.16■■■□□ 2.58
GBX1-201ENST00000297537 SLC52A2Q9HAB3 445 aa31.16■■■□□ 2.58
GBX1-201ENST00000297537 IL17REQ8NFR9 667 aa31.15■■■□□ 2.58
GBX1-201ENST00000297537 ZNF827Q17R98 1081 aa31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms