RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 FAM177BA6PVY3 158 aa16.22■□□□□ 0.19
TNFRSF21-201ENST00000296861 KLHL40Q2TBA0 621 aa16.22■□□□□ 0.19
TNFRSF21-201ENST00000296861 SLC26A8Q96RN1 970 aa16.22■□□□□ 0.19
TNFRSF21-201ENST00000296861 RNF17Q9BXT8 1623 aaKnown RBP16.22■□□□□ 0.19
TNFRSF21-201ENST00000296861 PTMSP20962 102 aa16.21■□□□□ 0.19
TNFRSF21-201ENST00000296861 HECW2Q9P2P5 1572 aa16.21■□□□□ 0.19
TNFRSF21-201ENST00000296861 USP26Q9BXU7 913 aa16.21■□□□□ 0.19
TNFRSF21-201ENST00000296861 NSFL1CQ9UNZ2 370 aaKnown RBP16.21■□□□□ 0.18
TNFRSF21-201ENST00000296861 ANXA1P04083 346 aa16.2■□□□□ 0.18
TNFRSF21-201ENST00000296861 ISY1Q9ULR0 285 aaKnown RBP16.2■□□□□ 0.18
TNFRSF21-201ENST00000296861 IL16Q14005 1332 aa16.2■□□□□ 0.18
TNFRSF21-201ENST00000296861 SURF6O75683 361 aaKnown RBP16.2■□□□□ 0.18
TNFRSF21-201ENST00000296861 RBM33Q96EV2 1170 aaKnown RBP16.2■□□□□ 0.18
TNFRSF21-201ENST00000296861 PRDM10Q9NQV6 1147 aa16.2■□□□□ 0.18
TNFRSF21-201ENST00000296861 NAP1L2Q9ULW6 460 aaPredicted RBP16.2■□□□□ 0.18
TNFRSF21-201ENST00000296861 KIF1BO60333 1816 aa16.19■□□□□ 0.18
TNFRSF21-201ENST00000296861 CEP85Q6P2H3 762 aa16.19■□□□□ 0.18
TNFRSF21-201ENST00000296861 NEO1Q92859 1461 aa16.19■□□□□ 0.18
TNFRSF21-201ENST00000296861 VPS37CA5D8V6 355 aaPredicted RBP16.19■□□□□ 0.18
TNFRSF21-201ENST00000296861 ABCC3O15438 1527 aa16.19■□□□□ 0.18
TNFRSF21-201ENST00000296861 USHBP1Q8N6Y0 703 aa16.19■□□□□ 0.18
TNFRSF21-201ENST00000296861 TSC1Q92574 1164 aa16.18■□□□□ 0.18
TNFRSF21-201ENST00000296861 TMX3Q96JJ7 454 aa16.18■□□□□ 0.18
TNFRSF21-201ENST00000296861 DCTPP1Q9H773 170 aa16.18■□□□□ 0.18
TNFRSF21-201ENST00000296861 UQCRHLA0A096LP55 91 aa16.18■□□□□ 0.18
TNFRSF21-201ENST00000296861 UQCRHP07919 91 aa16.18■□□□□ 0.18
TNFRSF21-201ENST00000296861 CPA1P15085 419 aa16.18■□□□□ 0.18
TNFRSF21-201ENST00000296861 FOSBP53539 338 aa16.18■□□□□ 0.18
TNFRSF21-201ENST00000296861 ABCA6Q8N139 1617 aa16.17■□□□□ 0.18
TNFRSF21-201ENST00000296861 SPC24Q8NBT2 197 aa16.17■□□□□ 0.18
TNFRSF21-201ENST00000296861 MROH1Q8NDA8 1641 aa16.17■□□□□ 0.18
TNFRSF21-201ENST00000296861 MAP3K4Q9Y6R4 1608 aa16.17■□□□□ 0.18
TNFRSF21-201ENST00000296861 TPM2P07951 284 aa16.17■□□□□ 0.18
TNFRSF21-201ENST00000296861 C17orf53Q8N3J3 647 aaPredicted RBP16.17■□□□□ 0.18
TNFRSF21-201ENST00000296861 IL13P35225 146 aa16.16■□□□□ 0.18
TNFRSF21-201ENST00000296861 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.16■□□□□ 0.18
TNFRSF21-201ENST00000296861 ANKRD44Q8N8A2 993 aa16.16■□□□□ 0.18
TNFRSF21-201ENST00000296861 TMEM63CQ9P1W3 806 aa16.16■□□□□ 0.18
TNFRSF21-201ENST00000296861 CCDC61Q9Y6R9 512 aa16.16■□□□□ 0.18
TNFRSF21-201ENST00000296861 NSD2O96028 1365 aa16.16■□□□□ 0.18
TNFRSF21-201ENST00000296861 LMBRD1Q9NUN5 540 aa16.16■□□□□ 0.18
TNFRSF21-201ENST00000296861 PALD1Q9ULE6 856 aa16.16■□□□□ 0.18
TNFRSF21-201ENST00000296861 GNAI2P04899 355 aa16.16■□□□□ 0.18
TNFRSF21-201ENST00000296861 EIF4A2Q14240 407 aaKnown RBP16.16■□□□□ 0.18
TNFRSF21-201ENST00000296861 CWC27Q6UX04 472 aaKnown RBP16.16■□□□□ 0.18
TNFRSF21-201ENST00000296861 RPAP2Q8IXW5 612 aaPredicted RBP16.16■□□□□ 0.18
TNFRSF21-201ENST00000296861 USP25Q9UHP3 1055 aa16.16■□□□□ 0.18
TNFRSF21-201ENST00000296861 LRRFIP2Q9Y608 721 aaKnown RBP16.16■□□□□ 0.18
TNFRSF21-201ENST00000296861 DRC7Q8IY82 874 aa16.15■□□□□ 0.18
TNFRSF21-201ENST00000296861 LRRCC1Q9C099 1032 aa16.15■□□□□ 0.18
TNFRSF21-201ENST00000296861 SPG7Q9UQ90 795 aa16.15■□□□□ 0.18
TNFRSF21-201ENST00000296861 MSH6P52701 1360 aa16.15■□□□□ 0.18
TNFRSF21-201ENST00000296861 WASLO00401 505 aaPredicted RBP16.15■□□□□ 0.18
TNFRSF21-201ENST00000296861 PDE1AP54750 535 aa16.15■□□□□ 0.18
TNFRSF21-201ENST00000296861 KIAA2012Q0VF49 1180 aa16.15■□□□□ 0.18
TNFRSF21-201ENST00000296861 FERMT3Q86UX7 667 aa16.15■□□□□ 0.18
TNFRSF21-201ENST00000296861 FRMPD1Q5SYB0 1578 aa16.15■□□□□ 0.18
TNFRSF21-201ENST00000296861 HAP1P54257 671 aaPredicted RBP16.15■□□□□ 0.18
TNFRSF21-201ENST00000296861 GPT2Q8TD30 523 aa16.15■□□□□ 0.18
TNFRSF21-201ENST00000296861 MYOM2P54296 1465 aa16.14■□□□□ 0.18
TNFRSF21-201ENST00000296861 SBNO2Q9Y2G9 1366 aa16.14■□□□□ 0.17
TNFRSF21-201ENST00000296861 FBXW7Q969H0 707 aa16.14■□□□□ 0.17
TNFRSF21-201ENST00000296861 DEPDC5O75140 1603 aa16.13■□□□□ 0.17
TNFRSF21-201ENST00000296861 PPFIA3O75145 1194 aa16.13■□□□□ 0.17
TNFRSF21-201ENST00000296861 UBTFL1P0CB47 393 aaPredicted RBP16.13■□□□□ 0.17
TNFRSF21-201ENST00000296861 JARID2Q92833 1246 aaPredicted RBP16.13■□□□□ 0.17
TNFRSF21-201ENST00000296861 MX1P20591 662 aa16.13■□□□□ 0.17
TNFRSF21-201ENST00000296861 NLRP6P59044 892 aa16.13■□□□□ 0.17
TNFRSF21-201ENST00000296861 ARHGAP45Q92619 1136 aa16.13■□□□□ 0.17
TNFRSF21-201ENST00000296861 MROH2AA6NES4 1674 aa16.13■□□□□ 0.17
TNFRSF21-201ENST00000296861 VWDEQ8N2E2 1590 aa16.12■□□□□ 0.17
TNFRSF21-201ENST00000296861 GADD45BO75293 160 aaPredicted RBP16.12■□□□□ 0.17
TNFRSF21-201ENST00000296861 TCEANC2Q96MN5 208 aa16.12■□□□□ 0.17
TNFRSF21-201ENST00000296861 PNMA6EA0A0J9YXQ4 647 aa16.12■□□□□ 0.17
TNFRSF21-201ENST00000296861 GOLGA6L4A6NEF3 574 aa16.12■□□□□ 0.17
TNFRSF21-201ENST00000296861 TSPY26PQ9H489 355 aa16.12■□□□□ 0.17
TNFRSF21-201ENST00000296861 AK9Q5TCS8 1911 aa16.11■□□□□ 0.17
TNFRSF21-201ENST00000296861 SYAP1Q96A49 352 aaPredicted RBP16.11■□□□□ 0.17
TNFRSF21-201ENST00000296861 TTC12Q9H892 705 aaPredicted RBP16.11■□□□□ 0.17
TNFRSF21-201ENST00000296861 IQGAP1P46940 1657 aa16.11■□□□□ 0.17
TNFRSF21-201ENST00000296861 AIMP1Q12904 312 aaKnown RBP16.11■□□□□ 0.17
TNFRSF21-201ENST00000296861 CWC22Q9HCG8 908 aaKnown RBP16.11■□□□□ 0.17
TNFRSF21-201ENST00000296861 HCLS1P14317 486 aaPredicted RBP16.1■□□□□ 0.17
TNFRSF21-201ENST00000296861 FGD1P98174 961 aa16.1■□□□□ 0.17
TNFRSF21-201ENST00000296861 SRGAP3O43295 1099 aa16.1■□□□□ 0.17
TNFRSF21-201ENST00000296861 HDGFP51858 240 aaKnown RBP16.1■□□□□ 0.17
TNFRSF21-201ENST00000296861 UNC5CLQ8IV45 518 aa16.1■□□□□ 0.17
TNFRSF21-201ENST00000296861 SMC3Q9UQE7 1217 aa16.1■□□□□ 0.17
TNFRSF21-201ENST00000296861 CFAP74Q9C0B2 1584 aa16.1■□□□□ 0.17
TNFRSF21-201ENST00000296861 ABCC4O15439 1325 aa16.1■□□□□ 0.17
TNFRSF21-201ENST00000296861 STK3Q13188 491 aa16.1■□□□□ 0.17
TNFRSF21-201ENST00000296861 PDCL3Q9H2J4 239 aa16.1■□□□□ 0.17
TNFRSF21-201ENST00000296861 YTHDC2Q9H6S0 1430 aaKnown RBP16.09■□□□□ 0.17
TNFRSF21-201ENST00000296861 HDGFL1Q5TGJ6 251 aa16.09■□□□□ 0.17
TNFRSF21-201ENST00000296861 ADGRB3O60242 1522 aa16.09■□□□□ 0.17
TNFRSF21-201ENST00000296861 CAMK4Q16566 473 aa16.09■□□□□ 0.17
TNFRSF21-201ENST00000296861 MTHFSDQ2M296 383 aaKnown RBP16.09■□□□□ 0.17
TNFRSF21-201ENST00000296861 DIAPH3Q9NSV4 1193 aa16.09■□□□□ 0.17
TNFRSF21-201ENST00000296861 LAMC1P11047 1609 aa16.09■□□□□ 0.17
TNFRSF21-201ENST00000296861 DIP2CQ9Y2E4 1556 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 191 ms