RNA–Protein interactions for RNA: ENST00000296783.7

PAPD4-201, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

APPRIS P3 TSL 2 BASIC

Gene PAPD4, Length 3,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-201ENST00000296783 LNPKQ9C0E8 428 aa13.22□□□□□ -0.29
PAPD4-201ENST00000296783 AMPHP49418 695 aa13.22□□□□□ -0.29
PAPD4-201ENST00000296783 UPF2Q9HAU5 1272 aaKnown RBP13.22□□□□□ -0.29
PAPD4-201ENST00000296783 NFKBIBQ15653 356 aa13.22□□□□□ -0.29
PAPD4-201ENST00000296783 GCC1Q96CN9 775 aa13.22□□□□□ -0.29
PAPD4-201ENST00000296783 AEBP2Q6ZN18 517 aaPredicted RBP13.21□□□□□ -0.29
PAPD4-201ENST00000296783 INTS3Q68E01 1043 aaKnown RBP13.21□□□□□ -0.3
PAPD4-201ENST00000296783 LRRC37A3O60309 1634 aa13.21□□□□□ -0.3
PAPD4-201ENST00000296783 HOXC9P31274 260 aa13.2□□□□□ -0.3
PAPD4-201ENST00000296783 HAP1P54257 671 aaPredicted RBP13.2□□□□□ -0.3
PAPD4-201ENST00000296783 NUTM2GQ5VZR2 741 aa13.2□□□□□ -0.3
PAPD4-201ENST00000296783 MIS18AQ9NYP9 233 aa13.19□□□□□ -0.3
PAPD4-201ENST00000296783 ANKLE2Q86XL3 938 aa13.19□□□□□ -0.3
PAPD4-201ENST00000296783 ANKRD45Q5TZF3 282 aa13.18□□□□□ -0.3
PAPD4-201ENST00000296783 ABTB2Q8N961 1025 aa13.18□□□□□ -0.3
PAPD4-201ENST00000296783 BECN1Q14457 450 aa13.18□□□□□ -0.3
PAPD4-201ENST00000296783 GAS2L2Q8NHY3 880 aa13.18□□□□□ -0.3
PAPD4-201ENST00000296783 ATP10DQ9P241 1426 aa13.18□□□□□ -0.3
PAPD4-201ENST00000296783 ADAMTSL3P82987 1691 aa13.18□□□□□ -0.3
PAPD4-201ENST00000296783 PTPRCP08575 1304 aa13.18□□□□□ -0.3
PAPD4-201ENST00000296783 RTF1Q92541 710 aaKnown RBP13.17□□□□□ -0.3
PAPD4-201ENST00000296783 LTN1O94822 1766 aa13.17□□□□□ -0.3
PAPD4-201ENST00000296783 MFAP1P55081 439 aaKnown RBP13.17□□□□□ -0.3
PAPD4-201ENST00000296783 BMP2KLQ5H9B9 411 aa13.17□□□□□ -0.3
PAPD4-201ENST00000296783 C22orf23Q9BZE7 217 aa13.17□□□□□ -0.3
PAPD4-201ENST00000296783 RBM33Q96EV2 1170 aaKnown RBP13.17□□□□□ -0.3
PAPD4-201ENST00000296783 TBC1D2Q9BYX2 928 aa13.17□□□□□ -0.3
PAPD4-201ENST00000296783 TSPYL4Q9UJ04 414 aa13.17□□□□□ -0.3
PAPD4-201ENST00000296783 PHF8Q9UPP1 1060 aa13.17□□□□□ -0.3
PAPD4-201ENST00000296783 MSH6P52701 1360 aa13.16□□□□□ -0.3
PAPD4-201ENST00000296783 HTATSF1O43719 755 aaKnown RBP13.15□□□□□ -0.3
PAPD4-201ENST00000296783 SLC4A2P04920 1241 aa13.15□□□□□ -0.3
PAPD4-201ENST00000296783 NFAT5O94916 1531 aa13.15□□□□□ -0.3
PAPD4-201ENST00000296783 ANTXR1Q9H6X2 564 aa13.15□□□□□ -0.3
PAPD4-201ENST00000296783 ADGRL3Q9HAR2 1447 aa13.15□□□□□ -0.3
PAPD4-201ENST00000296783 RTL1A6NKG5 1358 aa13.15□□□□□ -0.3
PAPD4-201ENST00000296783 SETD1BQ9UPS6 1966 aaKnown RBP13.15□□□□□ -0.3
PAPD4-201ENST00000296783 DCTPP1Q9H773 170 aa13.15□□□□□ -0.31
PAPD4-201ENST00000296783 GNAT3A8MTJ3 354 aa13.13□□□□□ -0.31
PAPD4-201ENST00000296783 FRAT2O75474 233 aaPredicted RBP13.13□□□□□ -0.31
PAPD4-201ENST00000296783 G2E3Q7L622 706 aa13.13□□□□□ -0.31
PAPD4-201ENST00000296783 ANKRD44Q8N8A2 993 aa13.13□□□□□ -0.31
PAPD4-201ENST00000296783 FAM208AQ9UK61 1670 aaKnown RBP13.13□□□□□ -0.31
PAPD4-201ENST00000296783 CEP85Q6P2H3 762 aa13.13□□□□□ -0.31
PAPD4-201ENST00000296783 IL17REQ8NFR9 667 aa13.13□□□□□ -0.31
PAPD4-201ENST00000296783 MEIS3Q99687 375 aa13.13□□□□□ -0.31
PAPD4-201ENST00000296783 RBM25P49756 843 aaKnown RBP13.12□□□□□ -0.31
PAPD4-201ENST00000296783 LTV1Q96GA3 475 aaPredicted RBP13.12□□□□□ -0.31
PAPD4-201ENST00000296783 MAP3K5Q99683 1374 aa13.12□□□□□ -0.31
PAPD4-201ENST00000296783 PHRF1Q9P1Y6 1649 aaKnown RBP13.12□□□□□ -0.31
PAPD4-201ENST00000296783 RPAP2Q8IXW5 612 aaPredicted RBP13.12□□□□□ -0.31
PAPD4-201ENST00000296783 SLKQ9H2G2 1235 aaPredicted RBP13.12□□□□□ -0.31
PAPD4-201ENST00000296783 C14orf37Q86TY3 774 aa13.11□□□□□ -0.31
PAPD4-201ENST00000296783 IP6K1Q92551 441 aa13.11□□□□□ -0.31
PAPD4-201ENST00000296783 ESCO1Q5FWF5 840 aa13.11□□□□□ -0.31
PAPD4-201ENST00000296783 USHBP1Q8N6Y0 703 aa13.11□□□□□ -0.31
PAPD4-201ENST00000296783 NPHP4O75161 1426 aaPredicted RBP13.1□□□□□ -0.31
PAPD4-201ENST00000296783 PLEKHM2Q8IWE5 1019 aa13.1□□□□□ -0.31
PAPD4-201ENST00000296783 F6X3S4 739 aa13.1□□□□□ -0.31
PAPD4-201ENST00000296783 GSPT1P15170 499 aaKnown RBP13.1□□□□□ -0.31
PAPD4-201ENST00000296783 CACNA1FO60840 1977 aa13.09□□□□□ -0.31
PAPD4-201ENST00000296783 TBC1D9Q6ZT07 1266 aa13.09□□□□□ -0.31
PAPD4-201ENST00000296783 RGPD2P0DJD1 1756 aa13.09□□□□□ -0.31
PAPD4-201ENST00000296783 NBPF6Q5VWK0 638 aa13.08□□□□□ -0.31
PAPD4-201ENST00000296783 NBPF4Q96M43 638 aa13.08□□□□□ -0.31
PAPD4-201ENST00000296783 BABAM1Q9NWV8 329 aa13.08□□□□□ -0.31
PAPD4-201ENST00000296783 MED1Q15648 1581 aaPredicted RBP13.08□□□□□ -0.32
PAPD4-201ENST00000296783 CEMIPQ8WUJ3 1361 aa13.08□□□□□ -0.32
PAPD4-201ENST00000296783 PSME1Q06323 249 aa13.08□□□□□ -0.32
PAPD4-201ENST00000296783 CCT4P50991 539 aaKnown RBP13.08□□□□□ -0.32
PAPD4-201ENST00000296783 TAF7Q15545 349 aaPredicted RBP13.08□□□□□ -0.32
PAPD4-201ENST00000296783 C16orf71Q8IYS4 520 aaPredicted RBP13.08□□□□□ -0.32
PAPD4-201ENST00000296783 N4BP2Q86UW6 1770 aaPredicted RBP13.07□□□□□ -0.32
PAPD4-201ENST00000296783 KIF2CQ99661 725 aa13.07□□□□□ -0.32
PAPD4-201ENST00000296783 FLIIQ13045 1269 aa13.07□□□□□ -0.32
PAPD4-201ENST00000296783 CCDC30Q5VVM6 783 aa13.07□□□□□ -0.32
PAPD4-201ENST00000296783 SLC4A10Q6U841 1118 aa13.07□□□□□ -0.32
PAPD4-201ENST00000296783 STK31Q9BXU1 1019 aa13.07□□□□□ -0.32
PAPD4-201ENST00000296783 SOS1Q07889 1333 aaPredicted RBP13.07□□□□□ -0.32
PAPD4-201ENST00000296783 GSE1Q14687 1217 aa13.06□□□□□ -0.32
PAPD4-201ENST00000296783 KCNH5Q8NCM2 988 aa13.06□□□□□ -0.32
PAPD4-201ENST00000296783 ORAI2Q96SN7 254 aa13.06□□□□□ -0.32
PAPD4-201ENST00000296783 SLIT3O75094 1523 aa13.06□□□□□ -0.32
PAPD4-201ENST00000296783 TTC22Q5TAA0 569 aa13.06□□□□□ -0.32
PAPD4-201ENST00000296783 OTUD7AQ8TE49 926 aaPredicted RBP13.06□□□□□ -0.32
PAPD4-201ENST00000296783 BCL11AQ9H165 835 aa13.06□□□□□ -0.32
PAPD4-201ENST00000296783 TRPM3Q9HCF6 1732 aaPredicted RBP13.05□□□□□ -0.32
PAPD4-201ENST00000296783 CDC45O75419 566 aa13.05□□□□□ -0.32
PAPD4-201ENST00000296783 SNX21Q969T3 373 aa13.05□□□□□ -0.32
PAPD4-201ENST00000296783 KDM3BQ7LBC6 1761 aa13.05□□□□□ -0.32
PAPD4-201ENST00000296783 NCOA3Q9Y6Q9 1424 aa13.05□□□□□ -0.32
PAPD4-201ENST00000296783 LMO7Q8WWI1 1683 aa13.05□□□□□ -0.32
PAPD4-201ENST00000296783 SMARCA5O60264 1052 aaPredicted RBP13.04□□□□□ -0.32
PAPD4-201ENST00000296783 NECTIN2Q92692 538 aa13.04□□□□□ -0.32
PAPD4-201ENST00000296783 NCAPD2Q15021 1401 aa13.04□□□□□ -0.32
PAPD4-201ENST00000296783 FKBP5Q13451 457 aaPredicted RBP13.04□□□□□ -0.32
PAPD4-201ENST00000296783 SPRYD3Q8NCJ5 442 aa13.04□□□□□ -0.32
PAPD4-201ENST00000296783 GCP02774 474 aa13.03□□□□□ -0.32
PAPD4-201ENST00000296783 XPCQ01831 940 aaPredicted RBP13.03□□□□□ -0.32
PAPD4-201ENST00000296783 ARHGEF25Q86VW2 580 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms