RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 TTC21AQ8NDW8 1320 aa14.84□□□□□ -0.03
RHO-201ENST00000296271 CRB1P82279 1406 aa14.84□□□□□ -0.03
RHO-201ENST00000296271 F6X3S4 739 aa14.84□□□□□ -0.03
RHO-201ENST00000296271 FLT4P35916 1363 aa14.83□□□□□ -0.03
RHO-201ENST00000296271 PIK3R4Q99570 1358 aa14.83□□□□□ -0.03
RHO-201ENST00000296271 APBB1O00213 710 aa14.83□□□□□ -0.03
RHO-201ENST00000296271 SBNO1A3KN83 1393 aa14.83□□□□□ -0.04
RHO-201ENST00000296271 HOXC9P31274 260 aa14.83□□□□□ -0.04
RHO-201ENST00000296271 TBC1D2Q9BYX2 928 aa14.83□□□□□ -0.04
RHO-201ENST00000296271 SLC4A2P04920 1241 aa14.82□□□□□ -0.04
RHO-201ENST00000296271 C16orf71Q8IYS4 520 aaPredicted RBP14.82□□□□□ -0.04
RHO-201ENST00000296271 RGS12O14924 1447 aa14.82□□□□□ -0.04
RHO-201ENST00000296271 XRN1Q8IZH2 1706 aaKnown RBP14.82□□□□□ -0.04
RHO-201ENST00000296271 TSPYL4Q9UJ04 414 aa14.82□□□□□ -0.04
RHO-201ENST00000296271 MEIS3Q99687 375 aa14.81□□□□□ -0.04
RHO-201ENST00000296271 IGSF1Q8N6C5 1336 aa14.81□□□□□ -0.04
RHO-201ENST00000296271 FMN2Q9NZ56 1722 aa14.81□□□□□ -0.04
RHO-201ENST00000296271 OTUD7AQ8TE49 926 aaPredicted RBP14.8□□□□□ -0.04
RHO-201ENST00000296271 C22orf23Q9BZE7 217 aa14.8□□□□□ -0.04
RHO-201ENST00000296271 API5Q9BZZ5 524 aaKnown RBP14.8□□□□□ -0.04
RHO-201ENST00000296271 UPF2Q9HAU5 1272 aaKnown RBP14.8□□□□□ -0.04
RHO-201ENST00000296271 SLC4A10Q6U841 1118 aa14.8□□□□□ -0.04
RHO-201ENST00000296271 RTF1Q92541 710 aaKnown RBP14.8□□□□□ -0.04
RHO-201ENST00000296271 ARHGEF10O15013 1369 aa14.8□□□□□ -0.04
RHO-201ENST00000296271 MSH6P52701 1360 aa14.8□□□□□ -0.04
RHO-201ENST00000296271 SMARCA5O60264 1052 aaPredicted RBP14.79□□□□□ -0.04
RHO-201ENST00000296271 ESCO1Q5FWF5 840 aa14.79□□□□□ -0.04
RHO-201ENST00000296271 PHF8Q9UPP1 1060 aa14.79□□□□□ -0.04
RHO-201ENST00000296271 MARF1Q9Y4F3 1742 aaKnown RBP14.79□□□□□ -0.04
RHO-201ENST00000296271 IL17REQ8NFR9 667 aa14.79□□□□□ -0.04
RHO-201ENST00000296271 ANKLE2Q86XL3 938 aa14.78□□□□□ -0.04
RHO-201ENST00000296271 ORAI2Q96SN7 254 aa14.78□□□□□ -0.04
RHO-201ENST00000296271 KDRP35968 1356 aa14.78□□□□□ -0.04
RHO-201ENST00000296271 INTS3Q68E01 1043 aaKnown RBP14.78□□□□□ -0.04
RHO-201ENST00000296271 LRRC59Q96AG4 307 aaKnown RBP14.77□□□□□ -0.04
RHO-201ENST00000296271 PRKCSHP14314 528 aaPredicted RBP14.77□□□□□ -0.05
RHO-201ENST00000296271 NBPF6Q5VWK0 638 aa14.76□□□□□ -0.05
RHO-201ENST00000296271 GCC1Q96CN9 775 aa14.76□□□□□ -0.05
RHO-201ENST00000296271 NBPF4Q96M43 638 aa14.76□□□□□ -0.05
RHO-201ENST00000296271 NWD1Q149M9 1564 aa14.75□□□□□ -0.05
RHO-201ENST00000296271 GSPT1P15170 499 aaKnown RBP14.75□□□□□ -0.05
RHO-201ENST00000296271 LMOD2Q6P5Q4 547 aa14.75□□□□□ -0.05
RHO-201ENST00000296271 ANTXR1Q9H6X2 564 aa14.75□□□□□ -0.05
RHO-201ENST00000296271 USP35Q9P2H5 1018 aa14.75□□□□□ -0.05
RHO-201ENST00000296271 ATP10DQ9P241 1426 aa14.75□□□□□ -0.05
RHO-201ENST00000296271 KIAA0232Q92628 1395 aa14.75□□□□□ -0.05
RHO-201ENST00000296271 BECN1Q14457 450 aa14.75□□□□□ -0.05
RHO-201ENST00000296271 CEP85Q6P2H3 762 aa14.75□□□□□ -0.05
RHO-201ENST00000296271 PSME1Q06323 249 aa14.74□□□□□ -0.05
RHO-201ENST00000296271 GNAT3A8MTJ3 354 aa14.74□□□□□ -0.05
RHO-201ENST00000296271 TBC1D9Q6ZT07 1266 aa14.74□□□□□ -0.05
RHO-201ENST00000296271 LGR6Q9HBX8 967 aa14.74□□□□□ -0.05
RHO-201ENST00000296271 RTL1A6NKG5 1358 aa14.73□□□□□ -0.05
RHO-201ENST00000296271 ANKARQ7Z5J8 1434 aa14.73□□□□□ -0.05
RHO-201ENST00000296271 PLEKHM2Q8IWE5 1019 aa14.73□□□□□ -0.05
RHO-201ENST00000296271 GAS2L2Q8NHY3 880 aa14.73□□□□□ -0.05
RHO-201ENST00000296271 RBM42Q9BTD8 480 aaKnown RBP14.73□□□□□ -0.05
RHO-201ENST00000296271 DCTPP1Q9H773 170 aa14.73□□□□□ -0.05
RHO-201ENST00000296271 KCNQ3O43525 872 aa14.72□□□□□ -0.05
RHO-201ENST00000296271 BMP2KLQ5H9B9 411 aa14.72□□□□□ -0.05
RHO-201ENST00000296271 ANKRD44Q8N8A2 993 aa14.72□□□□□ -0.05
RHO-201ENST00000296271 CD2BP2O95400 341 aaKnown RBP14.72□□□□□ -0.05
RHO-201ENST00000296271 CHD2O14647 1828 aaKnown RBP14.71□□□□□ -0.05
RHO-201ENST00000296271 TSHZ3Q63HK5 1081 aa14.71□□□□□ -0.05
RHO-201ENST00000296271 DDX17Q92841 729 aaKnown RBP14.71□□□□□ -0.06
RHO-201ENST00000296271 ANXA1P04083 346 aa14.7□□□□□ -0.06
RHO-201ENST00000296271 KIF2CQ99661 725 aa14.7□□□□□ -0.06
RHO-201ENST00000296271 PHAXQ9H814 394 aaKnown RBP14.7□□□□□ -0.06
RHO-201ENST00000296271 FKBP5Q13451 457 aaPredicted RBP14.7□□□□□ -0.06
RHO-201ENST00000296271 PTPRCP08575 1304 aa14.69□□□□□ -0.06
RHO-201ENST00000296271 RGPD2P0DJD1 1756 aa14.69□□□□□ -0.06
RHO-201ENST00000296271 FLIIQ13045 1269 aa14.69□□□□□ -0.06
RHO-201ENST00000296271 CHMP4BQ9H444 224 aaKnown RBP14.69□□□□□ -0.06
RHO-201ENST00000296271 FOXD4L1Q9NU39 408 aa14.69□□□□□ -0.06
RHO-201ENST00000296271 LTN1O94822 1766 aa14.69□□□□□ -0.06
RHO-201ENST00000296271 MAP3K5Q99683 1374 aa14.69□□□□□ -0.06
RHO-201ENST00000296271 EIF2S2P20042 333 aaKnown RBP14.69□□□□□ -0.06
RHO-201ENST00000296271 IP6K1Q92551 441 aa14.69□□□□□ -0.06
RHO-201ENST00000296271 EXOC6BQ9Y2D4 811 aa14.69□□□□□ -0.06
RHO-201ENST00000296271 GSE1Q14687 1217 aa14.68□□□□□ -0.06
RHO-201ENST00000296271 DNAJC5Q9H3Z4 198 aa14.68□□□□□ -0.06
RHO-201ENST00000296271 MPRIPQ6WCQ1 1025 aa14.68□□□□□ -0.06
RHO-201ENST00000296271 AXIN2Q9Y2T1 843 aa14.68□□□□□ -0.06
RHO-201ENST00000296271 TAF7Q15545 349 aaPredicted RBP14.67□□□□□ -0.06
RHO-201ENST00000296271 STK31Q9BXU1 1019 aa14.67□□□□□ -0.06
RHO-201ENST00000296271 PNMA6EA0A0J9YXQ4 647 aa14.67□□□□□ -0.06
RHO-201ENST00000296271 RBM25P49756 843 aaKnown RBP14.66□□□□□ -0.06
RHO-201ENST00000296271 GCP02774 474 aa14.66□□□□□ -0.06
RHO-201ENST00000296271 RPAP2Q8IXW5 612 aaPredicted RBP14.66□□□□□ -0.06
RHO-201ENST00000296271 KIF24Q5T7B8 1368 aa14.66□□□□□ -0.06
RHO-201ENST00000296271 ADGRL3Q9HAR2 1447 aa14.66□□□□□ -0.06
RHO-201ENST00000296271 TTC22Q5TAA0 569 aa14.65□□□□□ -0.06
RHO-201ENST00000296271 NFAT5O94916 1531 aa14.65□□□□□ -0.06
RHO-201ENST00000296271 HAP1P54257 671 aaPredicted RBP14.65□□□□□ -0.06
RHO-201ENST00000296271 IL27Q8NEV9 243 aa14.65□□□□□ -0.06
RHO-201ENST00000296271 PRAMEF22A3QJZ6 481 aa14.64□□□□□ -0.07
RHO-201ENST00000296271 SDSP20132 328 aa14.64□□□□□ -0.07
RHO-201ENST00000296271 HDGFL1Q5TGJ6 251 aa14.64□□□□□ -0.07
RHO-201ENST00000296271 CCDC30Q5VVM6 783 aa14.64□□□□□ -0.07
RHO-201ENST00000296271 NPHP4O75161 1426 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms