RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 SMARCA5O60264 1052 aaPredicted RBP20.89■□□□□ 0.94
CHRNE-201ENST00000293780 MRE11P49959 708 aa20.89■□□□□ 0.94
CHRNE-201ENST00000293780 GBP4Q96PP9 640 aa20.89■□□□□ 0.94
CHRNE-201ENST00000293780 MIS18AQ9NYP9 233 aa20.89■□□□□ 0.94
CHRNE-201ENST00000293780 CEP85Q6P2H3 762 aa20.89■□□□□ 0.93
CHRNE-201ENST00000293780 GRPEL1Q9HAV7 217 aa20.89■□□□□ 0.93
CHRNE-201ENST00000293780 TTC21BQ7Z4L5 1316 aa20.89■□□□□ 0.93
CHRNE-201ENST00000293780 AKAP12Q02952 1782 aa20.89■□□□□ 0.93
CHRNE-201ENST00000293780 SSFA2P28290 1259 aa20.88■□□□□ 0.93
CHRNE-201ENST00000293780 ATP10DQ9P241 1426 aa20.88■□□□□ 0.93
CHRNE-201ENST00000293780 ROBO2Q9HCK4 1378 aa20.88■□□□□ 0.93
CHRNE-201ENST00000293780 SIRT1Q96EB6 747 aa20.88■□□□□ 0.93
CHRNE-201ENST00000293780 GAS2L3Q86XJ1 694 aa20.87■□□□□ 0.93
CHRNE-201ENST00000293780 MEIS3Q99687 375 aa20.87■□□□□ 0.93
CHRNE-201ENST00000293780 ACEP12821 1306 aa20.87■□□□□ 0.93
CHRNE-201ENST00000293780 MSH6P52701 1360 aa20.87■□□□□ 0.93
CHRNE-201ENST00000293780 ITSN1Q15811 1721 aa20.86■□□□□ 0.93
CHRNE-201ENST00000293780 TECPR2O15040 1411 aa20.86■□□□□ 0.93
CHRNE-201ENST00000293780 PLPPR3Q6T4P5 718 aa20.85■□□□□ 0.93
CHRNE-201ENST00000293780 RPAP2Q8IXW5 612 aaPredicted RBP20.85■□□□□ 0.93
CHRNE-201ENST00000293780 USP26Q9BXU7 913 aa20.85■□□□□ 0.93
CHRNE-201ENST00000293780 RTL1A6NKG5 1358 aa20.85■□□□□ 0.93
CHRNE-201ENST00000293780 FOXO3O43524 673 aa20.84■□□□□ 0.93
CHRNE-201ENST00000293780 SLC4A2P04920 1241 aa20.84■□□□□ 0.93
CHRNE-201ENST00000293780 SDSP20132 328 aa20.84■□□□□ 0.93
CHRNE-201ENST00000293780 NRKQ7Z2Y5 1582 aa20.83■□□□□ 0.93
CHRNE-201ENST00000293780 CEBPAP49715 358 aaPredicted RBP20.83■□□□□ 0.93
CHRNE-201ENST00000293780 AK9Q5TCS8 1911 aa20.83■□□□□ 0.93
CHRNE-201ENST00000293780 HDGFP51858 240 aaKnown RBP20.82■□□□□ 0.92
CHRNE-201ENST00000293780 KIAA0232Q92628 1395 aa20.82■□□□□ 0.92
CHRNE-201ENST00000293780 RABEP1Q15276 862 aa20.82■□□□□ 0.92
CHRNE-201ENST00000293780 G2E3Q7L622 706 aa20.82■□□□□ 0.92
CHRNE-201ENST00000293780 PTPRCP08575 1304 aa20.81■□□□□ 0.92
CHRNE-201ENST00000293780 F6X3S4 739 aa20.81■□□□□ 0.92
CHRNE-201ENST00000293780 OVOS2A0A0J9YW53 1432 aa20.81■□□□□ 0.92
CHRNE-201ENST00000293780 CRB1P82279 1406 aa20.81■□□□□ 0.92
CHRNE-201ENST00000293780 OVOS2Q6IE36 1432 aa20.81■□□□□ 0.92
CHRNE-201ENST00000293780 PEAK1Q9H792 1746 aa20.81■□□□□ 0.92
CHRNE-201ENST00000293780 HAP1P54257 671 aaPredicted RBP20.8■□□□□ 0.92
CHRNE-201ENST00000293780 SKOR2Q2VWA4 1001 aaPredicted RBP20.8■□□□□ 0.92
CHRNE-201ENST00000293780 SLC4A10Q6U841 1118 aa20.8■□□□□ 0.92
CHRNE-201ENST00000293780 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.79■□□□□ 0.92
CHRNE-201ENST00000293780 MAP3K19Q56UN5 1328 aa20.79■□□□□ 0.92
CHRNE-201ENST00000293780 PLEKHG3A1L390 1219 aa20.79■□□□□ 0.92
CHRNE-201ENST00000293780 BAG4O95429 457 aaKnown RBP20.79■□□□□ 0.92
CHRNE-201ENST00000293780 MTHFSDQ2M296 383 aaKnown RBP20.79■□□□□ 0.92
CHRNE-201ENST00000293780 ISY1Q9ULR0 285 aaKnown RBP20.78■□□□□ 0.92
CHRNE-201ENST00000293780 TMEM2Q9UHN6 1383 aa20.77■□□□□ 0.92
CHRNE-201ENST00000293780 TNRQ92752 1358 aa20.77■□□□□ 0.92
CHRNE-201ENST00000293780 USP6P35125 1406 aa20.77■□□□□ 0.92
CHRNE-201ENST00000293780 ADAMTS13Q76LX8 1427 aa20.77■□□□□ 0.92
CHRNE-201ENST00000293780 PKP1Q13835 747 aa20.77■□□□□ 0.91
CHRNE-201ENST00000293780 TSPYL4Q9UJ04 414 aa20.77■□□□□ 0.91
CHRNE-201ENST00000293780 LTKP29376 864 aa20.76■□□□□ 0.91
CHRNE-201ENST00000293780 CLEC17AQ6ZS10 378 aa20.76■□□□□ 0.91
CHRNE-201ENST00000293780 PTMSP20962 102 aa20.75■□□□□ 0.91
CHRNE-201ENST00000293780 CLCN1P35523 988 aa20.75■□□□□ 0.91
CHRNE-201ENST00000293780 USP31Q70CQ4 1352 aa20.74■□□□□ 0.91
CHRNE-201ENST00000293780 RGPD1P0DJD0 1748 aa20.74■□□□□ 0.91
CHRNE-201ENST00000293780 SLC26A8Q96RN1 970 aa20.74■□□□□ 0.91
CHRNE-201ENST00000293780 RIMS1Q86UR5 1692 aaKnown RBP20.74■□□□□ 0.91
CHRNE-201ENST00000293780 TSHZ3Q63HK5 1081 aa20.73■□□□□ 0.91
CHRNE-201ENST00000293780 CASC1Q6TDU7 716 aa20.73■□□□□ 0.91
CHRNE-201ENST00000293780 RTF1Q92541 710 aaKnown RBP20.73■□□□□ 0.91
CHRNE-201ENST00000293780 DDX49Q9Y6V7 483 aaKnown RBP20.73■□□□□ 0.91
CHRNE-201ENST00000293780 FER1L4A9Z1Z3 1794 aa20.73■□□□□ 0.91
CHRNE-201ENST00000293780 ERBB4Q15303 1308 aa20.73■□□□□ 0.91
CHRNE-201ENST00000293780 GOLGA6L22H0YM25 854 aa20.73■□□□□ 0.91
CHRNE-201ENST00000293780 MCTP1Q6DN14 999 aa20.73■□□□□ 0.91
CHRNE-201ENST00000293780 ZGPATQ8N5A5 531 aaKnown RBP20.73■□□□□ 0.91
CHRNE-201ENST00000293780 EXOC6BQ9Y2D4 811 aa20.72■□□□□ 0.91
CHRNE-201ENST00000293780 PDE1AP54750 535 aa20.71■□□□□ 0.91
CHRNE-201ENST00000293780 HMMRO75330 724 aa20.71■□□□□ 0.91
CHRNE-201ENST00000293780 CYP2E1P05181 493 aaPredicted RBP20.71■□□□□ 0.91
CHRNE-201ENST00000293780 KLHL40Q2TBA0 621 aa20.71■□□□□ 0.91
CHRNE-201ENST00000293780 TOPAZ1Q8N9V7 1692 aa20.71■□□□□ 0.91
CHRNE-201ENST00000293780 NECTIN2Q92692 538 aa20.7■□□□□ 0.9
CHRNE-201ENST00000293780 EYA1Q99502 592 aa20.7■□□□□ 0.9
CHRNE-201ENST00000293780 ARHGEF10O15013 1369 aa20.7■□□□□ 0.9
CHRNE-201ENST00000293780 CCT4P50991 539 aaKnown RBP20.7■□□□□ 0.9
CHRNE-201ENST00000293780 NUCB2P80303 420 aa20.7■□□□□ 0.9
CHRNE-201ENST00000293780 UBR1Q8IWV7 1749 aa20.7■□□□□ 0.9
CHRNE-201ENST00000293780 SSH2Q76I76 1423 aa20.7■□□□□ 0.9
CHRNE-201ENST00000293780 NALCNQ8IZF0 1738 aa20.69■□□□□ 0.9
CHRNE-201ENST00000293780 ERC2O15083 957 aa20.69■□□□□ 0.9
CHRNE-201ENST00000293780 PTPRUQ92729 1446 aa20.69■□□□□ 0.9
CHRNE-201ENST00000293780 ESPNB1AK53 854 aa20.69■□□□□ 0.9
CHRNE-201ENST00000293780 ST18O60284 1047 aa20.69■□□□□ 0.9
CHRNE-201ENST00000293780 REC8O95072 547 aa20.69■□□□□ 0.9
CHRNE-201ENST00000293780 GNAI2P04899 355 aa20.68■□□□□ 0.9
CHRNE-201ENST00000293780 AMPHP49418 695 aa20.68■□□□□ 0.9
CHRNE-201ENST00000293780 OSBPL3Q9H4L5 887 aa20.68■□□□□ 0.9
CHRNE-201ENST00000293780 NCLP19338 710 aaKnown RBP20.67■□□□□ 0.9
CHRNE-201ENST00000293780 CHAMP1Q96JM3 812 aa20.67■□□□□ 0.9
CHRNE-201ENST00000293780 LMBRD1Q9NUN5 540 aa20.67■□□□□ 0.9
CHRNE-201ENST00000293780 ZDHHC9Q9Y397 364 aa20.67■□□□□ 0.9
CHRNE-201ENST00000293780 CEP170BQ9Y4F5 1589 aaPredicted RBP20.66■□□□□ 0.9
CHRNE-201ENST00000293780 PNMA6EA0A0J9YXQ4 647 aa20.66■□□□□ 0.9
CHRNE-201ENST00000293780 TRIM44Q96DX7 344 aaPredicted RBP20.66■□□□□ 0.9
CHRNE-201ENST00000293780 NAP1L5Q96NT1 182 aaPredicted RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms