RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 GNL2Q13823 731 aaKnown RBP13.74□□□□□ -0.21
NPC1L1-201ENST00000289547 TET3O43151 1660 aa13.73□□□□□ -0.21
NPC1L1-201ENST00000289547 C11orf95C9JLR9 678 aaPredicted RBP13.73□□□□□ -0.21
NPC1L1-201ENST00000289547 USP21Q9UK80 565 aa13.73□□□□□ -0.21
NPC1L1-201ENST00000289547 AGLP35573 1532 aa13.73□□□□□ -0.21
NPC1L1-201ENST00000289547 SETQ01105 290 aaPredicted RBP13.73□□□□□ -0.21
NPC1L1-201ENST00000289547 GPS2Q13227 327 aa13.73□□□□□ -0.21
NPC1L1-201ENST00000289547 BECN2A8MW95 431 aa13.73□□□□□ -0.21
NPC1L1-201ENST00000289547 MCM4P33991 863 aa13.73□□□□□ -0.21
NPC1L1-201ENST00000289547 AK7Q96M32 723 aa13.73□□□□□ -0.21
NPC1L1-201ENST00000289547 CCDC184Q52MB2 194 aa13.72□□□□□ -0.21
NPC1L1-201ENST00000289547 IFT57Q9NWB7 429 aa13.72□□□□□ -0.21
NPC1L1-201ENST00000289547 HSP90AB4PQ58FF6 505 aa13.72□□□□□ -0.21
NPC1L1-201ENST00000289547 ZNF772Q68DY9 489 aaPredicted RBP13.72□□□□□ -0.21
NPC1L1-201ENST00000289547 ATP6V1DQ9Y5K8 247 aa13.72□□□□□ -0.21
NPC1L1-201ENST00000289547 DDX19BQ9UMR2 479 aa13.72□□□□□ -0.21
NPC1L1-201ENST00000289547 COL17A1Q9UMD9 1497 aaPredicted RBP13.72□□□□□ -0.21
NPC1L1-201ENST00000289547 G3BP1Q13283 466 aaKnown RBP eCLIP13.72□□□□□ -0.21
NPC1L1-201ENST00000289547 TWISTNBQ3B726 338 aaPredicted RBP13.72□□□□□ -0.21
NPC1L1-201ENST00000289547 NOC3LQ8WTT2 800 aaKnown RBP13.72□□□□□ -0.21
NPC1L1-201ENST00000289547 PDCL3Q9H2J4 239 aa13.72□□□□□ -0.21
NPC1L1-201ENST00000289547 FBXW7Q969H0 707 aa13.71□□□□□ -0.21
NPC1L1-201ENST00000289547 FLT4P35916 1363 aa13.71□□□□□ -0.21
NPC1L1-201ENST00000289547 FAM177BA6PVY3 158 aa13.71□□□□□ -0.21
NPC1L1-201ENST00000289547 PTPRMP28827 1452 aa13.71□□□□□ -0.21
NPC1L1-201ENST00000289547 CDC42BPBQ9Y5S2 1711 aa13.71□□□□□ -0.22
NPC1L1-201ENST00000289547 CERKQ8TCT0 537 aa13.71□□□□□ -0.22
NPC1L1-201ENST00000289547 PRDM10Q9NQV6 1147 aa13.71□□□□□ -0.22
NPC1L1-201ENST00000289547 DIP2CQ9Y2E4 1556 aa13.71□□□□□ -0.22
NPC1L1-201ENST00000289547 WDR63Q8IWG1 891 aa13.7□□□□□ -0.22
NPC1L1-201ENST00000289547 AMOTL1Q8IY63 956 aa13.7□□□□□ -0.22
NPC1L1-201ENST00000289547 PANK1Q8TE04 598 aa13.7□□□□□ -0.22
NPC1L1-201ENST00000289547 FYB1O15117 783 aa13.7□□□□□ -0.22
NPC1L1-201ENST00000289547 TAF7Q15545 349 aaPredicted RBP13.7□□□□□ -0.22
NPC1L1-201ENST00000289547 PTPRTO14522 1441 aa13.7□□□□□ -0.22
NPC1L1-201ENST00000289547 A0A087WZG4 1122 aa13.7□□□□□ -0.22
NPC1L1-201ENST00000289547 PTCD1O75127 700 aaKnown RBP13.7□□□□□ -0.22
NPC1L1-201ENST00000289547 APPP05067 770 aa13.7□□□□□ -0.22
NPC1L1-201ENST00000289547 MAPK8IP2Q13387 824 aaPredicted RBP13.7□□□□□ -0.22
NPC1L1-201ENST00000289547 WWC1Q8IX03 1113 aa13.7□□□□□ -0.22
NPC1L1-201ENST00000289547 DZIP1LQ8IYY4 767 aaKnown RBP13.69□□□□□ -0.22
NPC1L1-201ENST00000289547 FMNL2Q96PY5 1086 aa13.69□□□□□ -0.22
NPC1L1-201ENST00000289547 TRIM34Q9BYJ4 488 aa13.69□□□□□ -0.22
NPC1L1-201ENST00000289547 PRDM15P57071 1507 aaPredicted RBP13.69□□□□□ -0.22
NPC1L1-201ENST00000289547 PLEKHG3A1L390 1219 aa13.69□□□□□ -0.22
NPC1L1-201ENST00000289547 TULP1O00294 542 aaPredicted RBP13.69□□□□□ -0.22
NPC1L1-201ENST00000289547 UBTFL1P0CB47 393 aaPredicted RBP13.68□□□□□ -0.22
NPC1L1-201ENST00000289547 LNPKQ9C0E8 428 aa13.68□□□□□ -0.22
NPC1L1-201ENST00000289547 CT47B1P0C2W7 299 aaPredicted RBP13.68□□□□□ -0.22
NPC1L1-201ENST00000289547 ZSCAN30Q86W11 494 aa13.68□□□□□ -0.22
NPC1L1-201ENST00000289547 EDC4Q6P2E9 1401 aaKnown RBP13.68□□□□□ -0.22
NPC1L1-201ENST00000289547 IP6K1Q92551 441 aa13.68□□□□□ -0.22
NPC1L1-201ENST00000289547 GNAI3P08754 354 aa13.68□□□□□ -0.22
NPC1L1-201ENST00000289547 METP08581 1390 aa13.67□□□□□ -0.22
NPC1L1-201ENST00000289547 MPNDQ8N594 471 aa13.67□□□□□ -0.22
NPC1L1-201ENST00000289547 MYL6BP14649 208 aa13.67□□□□□ -0.22
NPC1L1-201ENST00000289547 HOMER1Q86YM7 354 aa13.67□□□□□ -0.22
NPC1L1-201ENST00000289547 MYOM2P54296 1465 aa13.67□□□□□ -0.22
NPC1L1-201ENST00000289547 HSP90AB3PQ58FF7 597 aa13.67□□□□□ -0.22
NPC1L1-201ENST00000289547 KIF1BO60333 1816 aa13.67□□□□□ -0.22
NPC1L1-201ENST00000289547 TRPC5Q9UL62 973 aaPredicted RBP13.67□□□□□ -0.22
NPC1L1-201ENST00000289547 REC8O95072 547 aa13.66□□□□□ -0.22
NPC1L1-201ENST00000289547 TMPOP42166 694 aaKnown RBP13.66□□□□□ -0.22
NPC1L1-201ENST00000289547 PRPF40AO75400 957 aaKnown RBP13.66□□□□□ -0.22
NPC1L1-201ENST00000289547 MAP3K4Q9Y6R4 1608 aa13.66□□□□□ -0.22
NPC1L1-201ENST00000289547 RILPL2Q969X0 211 aa13.65□□□□□ -0.22
NPC1L1-201ENST00000289547 ZFYVE9O95405 1425 aa13.65□□□□□ -0.22
NPC1L1-201ENST00000289547 PCDH11XQ9BZA7 1347 aa13.65□□□□□ -0.22
NPC1L1-201ENST00000289547 PCDH11YQ9BZA8 1340 aa13.65□□□□□ -0.22
NPC1L1-201ENST00000289547 IFIT2P09913 472 aaKnown RBP13.65□□□□□ -0.22
NPC1L1-201ENST00000289547 A0A1W2PP64 1363 aa13.65□□□□□ -0.22
NPC1L1-201ENST00000289547 NOM1Q5C9Z4 860 aaKnown RBP13.65□□□□□ -0.22
NPC1L1-201ENST00000289547 ZHX1Q9UKY1 873 aaPredicted RBP13.65□□□□□ -0.22
NPC1L1-201ENST00000289547 SLC4A2P04920 1241 aa13.65□□□□□ -0.22
NPC1L1-201ENST00000289547 TPM3P06753 285 aa13.65□□□□□ -0.22
NPC1L1-201ENST00000289547 HSP90AB2PQ58FF8 381 aa13.65□□□□□ -0.22
NPC1L1-201ENST00000289547 ZNF428Q96B54 188 aa13.65□□□□□ -0.22
NPC1L1-201ENST00000289547 ARGLU1Q9NWB6 273 aaPredicted RBP13.65□□□□□ -0.22
NPC1L1-201ENST00000289547 IQGAP3Q86VI3 1631 aa13.65□□□□□ -0.23
NPC1L1-201ENST00000289547 EXOSC9Q06265 439 aaKnown RBP13.64□□□□□ -0.23
NPC1L1-201ENST00000289547 BICDL1Q6ZP65 573 aa13.64□□□□□ -0.23
NPC1L1-201ENST00000289547 SKAP1Q86WV1 359 aa13.64□□□□□ -0.23
NPC1L1-201ENST00000289547 SF3A1Q15459 793 aaKnown RBP13.64□□□□□ -0.23
NPC1L1-201ENST00000289547 FAM135BQ49AJ0 1406 aa13.64□□□□□ -0.23
NPC1L1-201ENST00000289547 ADGRB3O60242 1522 aa13.64□□□□□ -0.23
NPC1L1-201ENST00000289547 ASXL1Q8IXJ9 1541 aa13.64□□□□□ -0.23
NPC1L1-201ENST00000289547 PDZRN3Q9UPQ7 1066 aa13.63□□□□□ -0.23
NPC1L1-201ENST00000289547 CLTCQ00610 1675 aaKnown RBP13.63□□□□□ -0.23
NPC1L1-201ENST00000289547 RFC4P35249 363 aa13.63□□□□□ -0.23
NPC1L1-201ENST00000289547 HOXC9P31274 260 aa13.63□□□□□ -0.23
NPC1L1-201ENST00000289547 ACSBG1Q96GR2 724 aa13.63□□□□□ -0.23
NPC1L1-201ENST00000289547 ZMYM4Q5VZL5 1548 aa13.63□□□□□ -0.23
NPC1L1-201ENST00000289547 MBD3O95983 291 aa13.63□□□□□ -0.23
NPC1L1-201ENST00000289547 AAMPQ13685 434 aa13.63□□□□□ -0.23
NPC1L1-201ENST00000289547 AKAP4Q5JQC9 854 aa13.63□□□□□ -0.23
NPC1L1-201ENST00000289547 MCM10Q7L590 875 aa13.63□□□□□ -0.23
NPC1L1-201ENST00000289547 MNS1Q8NEH6 495 aa13.63□□□□□ -0.23
NPC1L1-201ENST00000289547 BAG6P46379 1132 aa13.62□□□□□ -0.23
NPC1L1-201ENST00000289547 DDX17Q92841 729 aaKnown RBP13.62□□□□□ -0.23
NPC1L1-201ENST00000289547 INO80Q9ULG1 1556 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms