RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.08■□□□□ 0
SLC6A1-201ENST00000287766 ABCC2Q92887 1545 aa15.08■□□□□ 0
SLC6A1-201ENST00000287766 CWC27Q6UX04 472 aaKnown RBP15.07■□□□□ 0
SLC6A1-201ENST00000287766 SRCIN1Q9C0H9 1055 aa15.07■□□□□ 0
SLC6A1-201ENST00000287766 UGGT1Q9NYU2 1555 aa15.07■□□□□ 0
SLC6A1-201ENST00000287766 ZNF521Q96K83 1311 aa15.07■□□□□ 0
SLC6A1-201ENST00000287766 CCDC173Q0VFZ6 552 aa15.07■□□□□ 0
SLC6A1-201ENST00000287766 MRPL50Q8N5N7 158 aaKnown RBP15.07■□□□□ 0
SLC6A1-201ENST00000287766 HMGN5P82970 282 aaKnown RBP15.07■□□□□ 0
SLC6A1-201ENST00000287766 ZNF530Q6P9A1 599 aaPredicted RBP15.07■□□□□ 0
SLC6A1-201ENST00000287766 TTC5Q8N0Z6 440 aa15.07■□□□□ 0
SLC6A1-201ENST00000287766 FAM184AQ8NB25 1140 aa15.07■□□□□ 0
SLC6A1-201ENST00000287766 ANXA1P04083 346 aa15.07■□□□□ 0
SLC6A1-201ENST00000287766 CIZ1Q9ULV3 898 aaPredicted RBP15.07■□□□□ 0
SLC6A1-201ENST00000287766 PTPRTO14522 1441 aa15.06■□□□□ 0
SLC6A1-201ENST00000287766 FOXO3O43524 673 aa15.06■□□□□ 0
SLC6A1-201ENST00000287766 XRCC6P12956 609 aaKnown RBP eCLIP15.06■□□□□ 0
SLC6A1-201ENST00000287766 PES1O00541 588 aaKnown RBP15.06■□□□□ 0
SLC6A1-201ENST00000287766 SMC5Q8IY18 1101 aa15.06■□□□□ 0
SLC6A1-201ENST00000287766 CNTROBQ8N137 903 aa15.06■□□□□ 0
SLC6A1-201ENST00000287766 NEUROD6Q96NK8 337 aa15.06■□□□□ 0
SLC6A1-201ENST00000287766 GDPD2Q9HCC8 539 aa15.06■□□□□ 0
SLC6A1-201ENST00000287766 IL16Q14005 1332 aa15.06■□□□□ 0
SLC6A1-201ENST00000287766 LRRFIP2Q9Y608 721 aaKnown RBP15.05■□□□□ 0
SLC6A1-201ENST00000287766 ABCA8O94911 1581 aa15.05■□□□□ 0
SLC6A1-201ENST00000287766 NPC1L1Q9UHC9 1359 aa15.05■□□□□ 0
SLC6A1-201ENST00000287766 ZHX1Q9UKY1 873 aaPredicted RBP15.05■□□□□ 0
SLC6A1-201ENST00000287766 MNS1Q8NEH6 495 aa15.05■□□□□ -0
SLC6A1-201ENST00000287766 BICD2Q8TD16 824 aa15.05■□□□□ -0
SLC6A1-201ENST00000287766 FSD1Q9BTV5 496 aa15.05■□□□□ -0
SLC6A1-201ENST00000287766 ACEP12821 1306 aa15.05■□□□□ -0
SLC6A1-201ENST00000287766 SYCE3A1L190 88 aa15.05■□□□□ -0
SLC6A1-201ENST00000287766 DDX58O95786 925 aaKnown RBP15.04■□□□□ -0
SLC6A1-201ENST00000287766 MX1P20591 662 aa15.04■□□□□ -0
SLC6A1-201ENST00000287766 OTUD7AQ8TE49 926 aaPredicted RBP15.04■□□□□ -0
SLC6A1-201ENST00000287766 RAPGEF4Q8WZA2 1011 aa15.04■□□□□ -0
SLC6A1-201ENST00000287766 ATP10AO60312 1499 aa15.04■□□□□ -0
SLC6A1-201ENST00000287766 MYL6BP14649 208 aa15.04■□□□□ -0
SLC6A1-201ENST00000287766 SDSP20132 328 aa15.04■□□□□ -0
SLC6A1-201ENST00000287766 STK3Q13188 491 aa15.04■□□□□ -0
SLC6A1-201ENST00000287766 TRMT2AQ8IZ69 625 aaKnown RBP15.04■□□□□ -0
SLC6A1-201ENST00000287766 TOMM22Q9NS69 142 aa15.04■□□□□ -0
SLC6A1-201ENST00000287766 HSP90AB4PQ58FF6 505 aa15.03■□□□□ -0
SLC6A1-201ENST00000287766 GNAT3A8MTJ3 354 aa15.03■□□□□ -0
SLC6A1-201ENST00000287766 SKIDA1Q1XH10 827 aa15.03■□□□□ -0
SLC6A1-201ENST00000287766 AMOTL2Q9Y2J4 779 aa15.03■□□□□ -0
SLC6A1-201ENST00000287766 ZNF518AQ6AHZ1 1483 aa15.03■□□□□ -0
SLC6A1-201ENST00000287766 KDM5DQ9BY66 1539 aa15.02■□□□□ -0
SLC6A1-201ENST00000287766 EIF4A2Q14240 407 aaKnown RBP15.02■□□□□ -0
SLC6A1-201ENST00000287766 TTC22Q5TAA0 569 aa15.02■□□□□ -0
SLC6A1-201ENST00000287766 DNAJC2Q99543 621 aaKnown RBP15.02■□□□□ -0
SLC6A1-201ENST00000287766 ARGLU1Q9NWB6 273 aaPredicted RBP15.02■□□□□ -0
SLC6A1-201ENST00000287766 RBM27Q9P2N5 1060 aaKnown RBP15.02■□□□□ -0
SLC6A1-201ENST00000287766 FLIIQ13045 1269 aa15.02□□□□□ -0.01
SLC6A1-201ENST00000287766 ARHGEF5Q12774 1597 aa15.02□□□□□ -0.01
SLC6A1-201ENST00000287766 TTC37Q6PGP7 1564 aa15.02□□□□□ -0.01
SLC6A1-201ENST00000287766 KDM4AO75164 1064 aa15.02□□□□□ -0.01
SLC6A1-201ENST00000287766 SPC24Q8NBT2 197 aa15.02□□□□□ -0.01
SLC6A1-201ENST00000287766 CWC22Q9HCG8 908 aaKnown RBP15.02□□□□□ -0.01
SLC6A1-201ENST00000287766 ZBTB7BO15156 539 aaPredicted RBP15.01□□□□□ -0.01
SLC6A1-201ENST00000287766 TAF7Q15545 349 aaPredicted RBP15.01□□□□□ -0.01
SLC6A1-201ENST00000287766 CEBPZQ03701 1054 aaKnown RBP15.01□□□□□ -0.01
SLC6A1-201ENST00000287766 NCBP3Q53F19 620 aaKnown RBP15.01□□□□□ -0.01
SLC6A1-201ENST00000287766 CCDC34Q96HJ3 373 aa15.01□□□□□ -0.01
SLC6A1-201ENST00000287766 BAG4O95429 457 aaKnown RBP15.01□□□□□ -0.01
SLC6A1-201ENST00000287766 CBX1P83916 185 aa15.01□□□□□ -0.01
SLC6A1-201ENST00000287766 TPD52L1Q16890 204 aaPredicted RBP15.01□□□□□ -0.01
SLC6A1-201ENST00000287766 CLSTN1O94985 981 aa15□□□□□ -0.01
SLC6A1-201ENST00000287766 ATP7AQ04656 1500 aa15□□□□□ -0.01
SLC6A1-201ENST00000287766 ZC3H6P61129 1189 aaKnown RBP15□□□□□ -0.01
SLC6A1-201ENST00000287766 NOM1Q5C9Z4 860 aaKnown RBP15□□□□□ -0.01
SLC6A1-201ENST00000287766 MPRIPQ6WCQ1 1025 aa15□□□□□ -0.01
SLC6A1-201ENST00000287766 MBD3O95983 291 aa15□□□□□ -0.01
SLC6A1-201ENST00000287766 FERMT3Q86UX7 667 aa15□□□□□ -0.01
SLC6A1-201ENST00000287766 AACSQ86V21 672 aa15□□□□□ -0.01
SLC6A1-201ENST00000287766 TRIM5Q9C035 493 aa15□□□□□ -0.01
SLC6A1-201ENST00000287766 ERVK-7P63135 1459 aa14.99□□□□□ -0.01
SLC6A1-201ENST00000287766 BTBD11A6QL63 1104 aa14.99□□□□□ -0.01
SLC6A1-201ENST00000287766 RNF20Q5VTR2 975 aa14.99□□□□□ -0.01
SLC6A1-201ENST00000287766 ZSCAN30Q86W11 494 aa14.99□□□□□ -0.01
SLC6A1-201ENST00000287766 ERICH4A6NGS2 130 aa14.99□□□□□ -0.01
SLC6A1-201ENST00000287766 PLEKHO1Q53GL0 409 aaPredicted RBP14.99□□□□□ -0.01
SLC6A1-201ENST00000287766 SASS6Q6UVJ0 657 aa14.99□□□□□ -0.01
SLC6A1-201ENST00000287766 RASSF8Q8NHQ8 419 aa14.99□□□□□ -0.01
SLC6A1-201ENST00000287766 PDCL3Q9H2J4 239 aa14.99□□□□□ -0.01
SLC6A1-201ENST00000287766 JAKMIP1Q96N16 626 aaKnown RBP14.99□□□□□ -0.01
SLC6A1-201ENST00000287766 TSPY26PQ9H489 355 aa14.99□□□□□ -0.01
SLC6A1-201ENST00000287766 SPG7Q9UQ90 795 aa14.99□□□□□ -0.01
SLC6A1-201ENST00000287766 PPIP5K1Q6PFW1 1433 aa14.99□□□□□ -0.01
SLC6A1-201ENST00000287766 MCM2P49736 904 aa14.98□□□□□ -0.01
SLC6A1-201ENST00000287766 HSP90B2PQ58FF3 399 aa14.98□□□□□ -0.01
SLC6A1-201ENST00000287766 ARHGAP45Q92619 1136 aa14.98□□□□□ -0.01
SLC6A1-201ENST00000287766 KIF3AQ9Y496 699 aa14.98□□□□□ -0.01
SLC6A1-201ENST00000287766 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.98□□□□□ -0.01
SLC6A1-201ENST00000287766 DTNBO60941 627 aa14.98□□□□□ -0.01
SLC6A1-201ENST00000287766 CDC42BPAQ5VT25 1732 aa14.97□□□□□ -0.01
SLC6A1-201ENST00000287766 THEMISQ8N1K5 641 aaPredicted RBP14.97□□□□□ -0.01
SLC6A1-201ENST00000287766 ISY1Q9ULR0 285 aaKnown RBP14.97□□□□□ -0.01
SLC6A1-201ENST00000287766 TTC21BQ7Z4L5 1316 aa14.97□□□□□ -0.01
SLC6A1-201ENST00000287766 G2E3Q7L622 706 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms