RNA–Protein interactions for RNA: ENST00000287538.9

ZIC3-201, Transcript of Zic family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIC3, Length 3,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3-201ENST00000287538 BECN1Q14457 450 aa16.09■□□□□ 0.17
ZIC3-201ENST00000287538 NBPF6Q5VWK0 638 aa16.09■□□□□ 0.17
ZIC3-201ENST00000287538 NBPF4Q96M43 638 aa16.09■□□□□ 0.17
ZIC3-201ENST00000287538 MRPL50Q8N5N7 158 aaKnown RBP16.09■□□□□ 0.17
ZIC3-201ENST00000287538 GCP02774 474 aa16.09■□□□□ 0.17
ZIC3-201ENST00000287538 MED14O60244 1454 aa16.08■□□□□ 0.17
ZIC3-201ENST00000287538 SPRYD3Q8NCJ5 442 aa16.08■□□□□ 0.16
ZIC3-201ENST00000287538 XRCC6P12956 609 aaKnown RBP eCLIP16.08■□□□□ 0.16
ZIC3-201ENST00000287538 SETD1AO15047 1707 aaKnown RBP16.08■□□□□ 0.16
ZIC3-201ENST00000287538 GOLGA6L3A6NEY3 463 aa16.07■□□□□ 0.16
ZIC3-201ENST00000287538 USP32Q8NFA0 1604 aa16.07■□□□□ 0.16
ZIC3-201ENST00000287538 ANXA1P04083 346 aa16.07■□□□□ 0.16
ZIC3-201ENST00000287538 GAS2L2Q8NHY3 880 aa16.07■□□□□ 0.16
ZIC3-201ENST00000287538 GZF1Q9H116 711 aaPredicted RBP16.07■□□□□ 0.16
ZIC3-201ENST00000287538 GNAT3A8MTJ3 354 aa16.07■□□□□ 0.16
ZIC3-201ENST00000287538 SEC24BO95487 1268 aa16.07■□□□□ 0.16
ZIC3-201ENST00000287538 CT47B1P0C2W7 299 aaPredicted RBP16.07■□□□□ 0.16
ZIC3-201ENST00000287538 CEP170BQ9Y4F5 1589 aaPredicted RBP16.07■□□□□ 0.16
ZIC3-201ENST00000287538 CLCN1P35523 988 aa16.06■□□□□ 0.16
ZIC3-201ENST00000287538 ZNF530Q6P9A1 599 aaPredicted RBP16.06■□□□□ 0.16
ZIC3-201ENST00000287538 G2E3Q7L622 706 aa16.06■□□□□ 0.16
ZIC3-201ENST00000287538 STK31Q9BXU1 1019 aa16.06■□□□□ 0.16
ZIC3-201ENST00000287538 PANK2Q9BZ23 570 aa16.06■□□□□ 0.16
ZIC3-201ENST00000287538 NPHP4O75161 1426 aaPredicted RBP16.06■□□□□ 0.16
ZIC3-201ENST00000287538 KIF20BQ96Q89 1820 aa16.06■□□□□ 0.16
ZIC3-201ENST00000287538 FKBP5Q13451 457 aaPredicted RBP16.06■□□□□ 0.16
ZIC3-201ENST00000287538 LGR6Q9HBX8 967 aa16.06■□□□□ 0.16
ZIC3-201ENST00000287538 CDK12Q9NYV4 1490 aaPredicted RBP16.05■□□□□ 0.16
ZIC3-201ENST00000287538 RGPD8O14715 1765 aaPredicted RBP16.05■□□□□ 0.16
ZIC3-201ENST00000287538 MFAP1P55081 439 aaKnown RBP16.05■□□□□ 0.16
ZIC3-201ENST00000287538 TEFQ10587 303 aa16.05■□□□□ 0.16
ZIC3-201ENST00000287538 ARHGAP23Q9P227 1491 aa16.05■□□□□ 0.16
ZIC3-201ENST00000287538 SBNO1A3KN83 1393 aa16.05■□□□□ 0.16
ZIC3-201ENST00000287538 DIP2AQ14689 1571 aa16.05■□□□□ 0.16
ZIC3-201ENST00000287538 A0A0G2JS52 829 aa16.04■□□□□ 0.16
ZIC3-201ENST00000287538 ALDH1L2Q3SY69 923 aa16.04■□□□□ 0.16
ZIC3-201ENST00000287538 C19orf44Q9H6X5 657 aa16.04■□□□□ 0.16
ZIC3-201ENST00000287538 USP19O94966 1318 aa16.04■□□□□ 0.16
ZIC3-201ENST00000287538 OVOS2A0A0J9YW53 1432 aa16.03■□□□□ 0.16
ZIC3-201ENST00000287538 OVOS2Q6IE36 1432 aa16.03■□□□□ 0.16
ZIC3-201ENST00000287538 SLIT1O75093 1534 aa16.03■□□□□ 0.16
ZIC3-201ENST00000287538 ANKRD24Q8TF21 1146 aa16.03■□□□□ 0.16
ZIC3-201ENST00000287538 IL17REQ8NFR9 667 aa16.03■□□□□ 0.16
ZIC3-201ENST00000287538 API5Q9BZZ5 524 aaKnown RBP16.03■□□□□ 0.16
ZIC3-201ENST00000287538 CHL1O00533 1208 aa16.02■□□□□ 0.16
ZIC3-201ENST00000287538 ZNF853P0CG23 659 aa16.02■□□□□ 0.15
ZIC3-201ENST00000287538 ZBTB40Q9NUA8 1239 aa16.02■□□□□ 0.15
ZIC3-201ENST00000287538 AXIN2Q9Y2T1 843 aa16.02■□□□□ 0.15
ZIC3-201ENST00000287538 C1orf141Q5JVX7 400 aa16.02■□□□□ 0.15
ZIC3-201ENST00000287538 KCNQ3O43525 872 aa16.01■□□□□ 0.15
ZIC3-201ENST00000287538 UPF2Q9HAU5 1272 aaKnown RBP16.01■□□□□ 0.15
ZIC3-201ENST00000287538 IP6K1Q92551 441 aa16.01■□□□□ 0.15
ZIC3-201ENST00000287538 TMEM94Q12767 1356 aa16.01■□□□□ 0.15
ZIC3-201ENST00000287538 PTCH1Q13635 1447 aa16.01■□□□□ 0.15
ZIC3-201ENST00000287538 KCNH5Q8NCM2 988 aa16■□□□□ 0.15
ZIC3-201ENST00000287538 ITSN1Q15811 1721 aa16■□□□□ 0.15
ZIC3-201ENST00000287538 HDGFL1Q5TGJ6 251 aa15.99■□□□□ 0.15
ZIC3-201ENST00000287538 MEIS3Q99687 375 aa15.99■□□□□ 0.15
ZIC3-201ENST00000287538 ZBTB7BO15156 539 aaPredicted RBP15.99■□□□□ 0.15
ZIC3-201ENST00000287538 SMARCA5O60264 1052 aaPredicted RBP15.98■□□□□ 0.15
ZIC3-201ENST00000287538 AIMP1Q12904 312 aaKnown RBP15.98■□□□□ 0.15
ZIC3-201ENST00000287538 ANTXR1Q9H6X2 564 aa15.98■□□□□ 0.15
ZIC3-201ENST00000287538 IGSF1Q8N6C5 1336 aa15.98■□□□□ 0.15
ZIC3-201ENST00000287538 TAF7Q15545 349 aaPredicted RBP15.98■□□□□ 0.15
ZIC3-201ENST00000287538 STRN4Q9NRL3 753 aa15.98■□□□□ 0.15
ZIC3-201ENST00000287538 USP31Q70CQ4 1352 aa15.97■□□□□ 0.15
ZIC3-201ENST00000287538 FSD2A1L4K1 749 aa15.97■□□□□ 0.15
ZIC3-201ENST00000287538 RAPGEF4Q8WZA2 1011 aa15.97■□□□□ 0.15
ZIC3-201ENST00000287538 SLC39A6Q13433 755 aa15.96■□□□□ 0.15
ZIC3-201ENST00000287538 BTBD11A6QL63 1104 aa15.96■□□□□ 0.15
ZIC3-201ENST00000287538 PIP4K2AP48426 406 aaPredicted RBP15.96■□□□□ 0.15
ZIC3-201ENST00000287538 PLEKHO1Q53GL0 409 aaPredicted RBP15.96■□□□□ 0.15
ZIC3-201ENST00000287538 PHAXQ9H814 394 aaKnown RBP15.96■□□□□ 0.15
ZIC3-201ENST00000287538 C16orf71Q8IYS4 520 aaPredicted RBP15.96■□□□□ 0.14
ZIC3-201ENST00000287538 PIK3R4Q99570 1358 aa15.95■□□□□ 0.14
ZIC3-201ENST00000287538 NCBP3Q53F19 620 aaKnown RBP15.95■□□□□ 0.14
ZIC3-201ENST00000287538 KAT6BQ8WYB5 2073 aa15.95■□□□□ 0.14
ZIC3-201ENST00000287538 MCM4P33991 863 aa15.94■□□□□ 0.14
ZIC3-201ENST00000287538 ADGRB2O60241 1585 aa15.94■□□□□ 0.14
ZIC3-201ENST00000287538 ANKRD26Q9UPS8 1709 aa15.94■□□□□ 0.14
ZIC3-201ENST00000287538 CHD1LQ86WJ1 897 aa15.94■□□□□ 0.14
ZIC3-201ENST00000287538 ZNF335Q9H4Z2 1342 aaPredicted RBP15.94■□□□□ 0.14
ZIC3-201ENST00000287538 SSH2Q76I76 1423 aa15.93■□□□□ 0.14
ZIC3-201ENST00000287538 CCDC30Q5VVM6 783 aa15.93■□□□□ 0.14
ZIC3-201ENST00000287538 ZNF330Q9Y3S2 320 aaPredicted RBP15.93■□□□□ 0.14
ZIC3-201ENST00000287538 ADGRL3Q9HAR2 1447 aa15.93■□□□□ 0.14
ZIC3-201ENST00000287538 TBC1D2Q9BYX2 928 aa15.93■□□□□ 0.14
ZIC3-201ENST00000287538 ARHGEF10O15013 1369 aa15.93■□□□□ 0.14
ZIC3-201ENST00000287538 ESPNB1AK53 854 aa15.93■□□□□ 0.14
ZIC3-201ENST00000287538 FLIIQ13045 1269 aa15.93■□□□□ 0.14
ZIC3-201ENST00000287538 ARHGEF25Q86VW2 580 aa15.93■□□□□ 0.14
ZIC3-201ENST00000287538 PRAMEF22A3QJZ6 481 aa15.92■□□□□ 0.14
ZIC3-201ENST00000287538 CADPS2Q86UW7 1296 aa15.92■□□□□ 0.14
ZIC3-201ENST00000287538 PRDM11Q9NQV5 511 aa15.92■□□□□ 0.14
ZIC3-201ENST00000287538 EXOC6BQ9Y2D4 811 aa15.92■□□□□ 0.14
ZIC3-201ENST00000287538 MRE11P49959 708 aa15.92■□□□□ 0.14
ZIC3-201ENST00000287538 VIRMAQ69YN4 1812 aaKnown RBP15.92■□□□□ 0.14
ZIC3-201ENST00000287538 TSHZ3Q63HK5 1081 aa15.92■□□□□ 0.14
ZIC3-201ENST00000287538 SIRT2Q8IXJ6 389 aa15.92■□□□□ 0.14
ZIC3-201ENST00000287538 CHMP4BQ9H444 224 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms