RNA–Protein interactions for RNA: ENST00000280154.11

PDCD4-201, Transcript of programmed cell death 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD4, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-201ENST00000280154 TMX4Q9H1E5 349 aaPredicted RBP12.2□□□□□ -0.46
PDCD4-201ENST00000280154 CGNL1Q0VF96 1302 aa12.2□□□□□ -0.46
PDCD4-201ENST00000280154 CABP2Q9NPB3 220 aa12.2□□□□□ -0.46
PDCD4-201ENST00000280154 MCCP23508 829 aa12.19□□□□□ -0.46
PDCD4-201ENST00000280154 BRINP3Q76B58 766 aa12.19□□□□□ -0.46
PDCD4-201ENST00000280154 LRRC37A3O60309 1634 aa12.19□□□□□ -0.46
PDCD4-201ENST00000280154 ACEP12821 1306 aa12.19□□□□□ -0.46
PDCD4-201ENST00000280154 CLGNO14967 610 aa12.18□□□□□ -0.46
PDCD4-201ENST00000280154 PDE6BP35913 854 aa12.18□□□□□ -0.46
PDCD4-201ENST00000280154 TTC21BQ7Z4L5 1316 aa12.18□□□□□ -0.46
PDCD4-201ENST00000280154 TERF2IPQ9NYB0 399 aa12.18□□□□□ -0.46
PDCD4-201ENST00000280154 ARHGEF10O15013 1369 aa12.18□□□□□ -0.46
PDCD4-201ENST00000280154 RRP9O43818 475 aaKnown RBP12.17□□□□□ -0.46
PDCD4-201ENST00000280154 VIRMAQ69YN4 1812 aaKnown RBP12.17□□□□□ -0.46
PDCD4-201ENST00000280154 PANK3Q9H999 370 aa12.17□□□□□ -0.46
PDCD4-201ENST00000280154 SLC12A5Q9H2X9 1139 aa12.17□□□□□ -0.46
PDCD4-201ENST00000280154 PHF8Q9UPP1 1060 aa12.17□□□□□ -0.46
PDCD4-201ENST00000280154 CICQ96RK0 1608 aaPredicted RBP12.16□□□□□ -0.46
PDCD4-201ENST00000280154 SPATA31A3Q5VYP0 1347 aa12.16□□□□□ -0.46
PDCD4-201ENST00000280154 RALBP1Q15311 655 aa12.16□□□□□ -0.46
PDCD4-201ENST00000280154 CERKQ8TCT0 537 aa12.16□□□□□ -0.46
PDCD4-201ENST00000280154 CABP1Q9NZU7 370 aa12.16□□□□□ -0.46
PDCD4-201ENST00000280154 SLAIN2Q9P270 581 aa12.16□□□□□ -0.46
PDCD4-201ENST00000280154 SIPA1L3O60292 1781 aaPredicted RBP12.16□□□□□ -0.46
PDCD4-201ENST00000280154 CC2D2BQ6DHV5 1058 aa12.16□□□□□ -0.46
PDCD4-201ENST00000280154 RGPD2P0DJD1 1756 aa12.15□□□□□ -0.46
PDCD4-201ENST00000280154 CCER2I3L3R5 266 aa12.15□□□□□ -0.46
PDCD4-201ENST00000280154 FYB1O15117 783 aa12.15□□□□□ -0.46
PDCD4-201ENST00000280154 BLMP54132 1417 aaPredicted RBP12.15□□□□□ -0.46
PDCD4-201ENST00000280154 THSD7AQ9UPZ6 1657 aa12.14□□□□□ -0.47
PDCD4-201ENST00000280154 NPHP3Q7Z494 1330 aa12.14□□□□□ -0.47
PDCD4-201ENST00000280154 PRKRIP1Q9H875 184 aaPredicted RBP12.14□□□□□ -0.47
PDCD4-201ENST00000280154 ZHX1Q9UKY1 873 aaPredicted RBP12.14□□□□□ -0.47
PDCD4-201ENST00000280154 CHMP4CQ96CF2 233 aa12.13□□□□□ -0.47
PDCD4-201ENST00000280154 LOC102724159A0A0B4J2E5 919 aa12.12□□□□□ -0.47
PDCD4-201ENST00000280154 PWP2Q15269 919 aaKnown RBP12.12□□□□□ -0.47
PDCD4-201ENST00000280154 RBM26Q5T8P6 1007 aaKnown RBP12.12□□□□□ -0.47
PDCD4-201ENST00000280154 FBXW7Q969H0 707 aa12.12□□□□□ -0.47
PDCD4-201ENST00000280154 HIRIP3Q9BW71 556 aaPredicted RBP12.12□□□□□ -0.47
PDCD4-201ENST00000280154 CC2D1BQ5T0F9 858 aaKnown RBP12.12□□□□□ -0.47
PDCD4-201ENST00000280154 HDGFL2Q7Z4V5 671 aaPredicted RBP12.12□□□□□ -0.47
PDCD4-201ENST00000280154 CREBRFQ8IUR6 639 aa12.12□□□□□ -0.47
PDCD4-201ENST00000280154 RBM19Q9Y4C8 960 aaKnown RBP12.12□□□□□ -0.47
PDCD4-201ENST00000280154 ATF3P18847 181 aa12.11□□□□□ -0.47
PDCD4-201ENST00000280154 ARID4AP29374 1257 aaPredicted RBP12.11□□□□□ -0.47
PDCD4-201ENST00000280154 SRPK2P78362 688 aaKnown RBP12.11□□□□□ -0.47
PDCD4-201ENST00000280154 LRP6O75581 1613 aa12.11□□□□□ -0.47
PDCD4-201ENST00000280154 DNTTIP2Q5QJE6 756 aaKnown RBP12.11□□□□□ -0.47
PDCD4-201ENST00000280154 SLIT2O94813 1529 aa12.11□□□□□ -0.47
PDCD4-201ENST00000280154 PAPPAQ13219 1627 aa12.11□□□□□ -0.47
PDCD4-201ENST00000280154 ZNF831Q5JPB2 1677 aa12.1□□□□□ -0.47
PDCD4-201ENST00000280154 HSP90AA1P07900 732 aaKnown RBP12.1□□□□□ -0.47
PDCD4-201ENST00000280154 MYBBP1AQ9BQG0 1328 aaKnown RBP12.1□□□□□ -0.47
PDCD4-201ENST00000280154 SETQ01105 290 aaPredicted RBP12.1□□□□□ -0.47
PDCD4-201ENST00000280154 ORAI2Q96SN7 254 aa12.1□□□□□ -0.47
PDCD4-201ENST00000280154 RBM27Q9P2N5 1060 aaKnown RBP12.1□□□□□ -0.47
PDCD4-201ENST00000280154 ZNF622Q969S3 477 aaKnown RBP eCLIP12.09□□□□□ -0.473e-6■□□□□ 8.1
PDCD4-201ENST00000280154 DLG5Q8TDM6 1919 aa12.09□□□□□ -0.47
PDCD4-201ENST00000280154 KDRP35968 1356 aa12.09□□□□□ -0.47
PDCD4-201ENST00000280154 APBB1IPQ7Z5R6 666 aaPredicted RBP12.09□□□□□ -0.47
PDCD4-201ENST00000280154 MSH5O43196 834 aa12.08□□□□□ -0.48
PDCD4-201ENST00000280154 SEMA3FQ13275 785 aa12.08□□□□□ -0.48
PDCD4-201ENST00000280154 LMOD2Q6P5Q4 547 aa12.08□□□□□ -0.48
PDCD4-201ENST00000280154 PSME1Q06323 249 aa12.07□□□□□ -0.48
PDCD4-201ENST00000280154 FOXD4Q12950 439 aaPredicted RBP12.06□□□□□ -0.48
PDCD4-201ENST00000280154 ZNF513Q8N8E2 541 aaPredicted RBP12.06□□□□□ -0.48
PDCD4-201ENST00000280154 SAFB2Q14151 953 aaKnown RBP eCLIP12.06□□□□□ -0.48
PDCD4-201ENST00000280154 SCN11AQ9UI33 1791 aa12.05□□□□□ -0.48
PDCD4-201ENST00000280154 TOM1O60784 492 aa12.05□□□□□ -0.48
PDCD4-201ENST00000280154 DDX10Q13206 875 aaKnown RBP12.05□□□□□ -0.48
PDCD4-201ENST00000280154 HSP90AB4PQ58FF6 505 aa12.05□□□□□ -0.48
PDCD4-201ENST00000280154 NGEFQ8N5V2 710 aa12.05□□□□□ -0.48
PDCD4-201ENST00000280154 DISP2A7MBM2 1401 aa12.05□□□□□ -0.48
PDCD4-201ENST00000280154 COL5A2P05997 1499 aaPredicted RBP12.05□□□□□ -0.48
PDCD4-201ENST00000280154 ANP32BQ92688 251 aaKnown RBP12.05□□□□□ -0.48
PDCD4-201ENST00000280154 PPP2R1AP30153 589 aa12.04□□□□□ -0.48
PDCD4-201ENST00000280154 KRT28Q7Z3Y7 464 aa12.04□□□□□ -0.48
PDCD4-201ENST00000280154 EVI5LQ96CN4 794 aa12.04□□□□□ -0.48
PDCD4-201ENST00000280154 MRC1P22897 1456 aa12.04□□□□□ -0.48
PDCD4-201ENST00000280154 OVOS2A0A0G2JMS6 1433 aa12.04□□□□□ -0.48
PDCD4-201ENST00000280154 RGPD3A6NKT7 1758 aaPredicted RBP12.04□□□□□ -0.48
PDCD4-201ENST00000280154 RGPD4Q7Z3J3 1758 aa12.04□□□□□ -0.48
PDCD4-201ENST00000280154 KNSTRNQ9Y448 316 aa12.04□□□□□ -0.48
PDCD4-201ENST00000280154 SPRYD3Q8NCJ5 442 aa12.03□□□□□ -0.48
PDCD4-201ENST00000280154 JCADQ9P266 1359 aa12.03□□□□□ -0.48
PDCD4-201ENST00000280154 UBR2Q8IWV8 1755 aa12.03□□□□□ -0.48
PDCD4-201ENST00000280154 FLT4P35916 1363 aa12.03□□□□□ -0.48
PDCD4-201ENST00000280154 MARCH6O60337 910 aa12.03□□□□□ -0.48
PDCD4-201ENST00000280154 PHF14O94880 888 aa12.03□□□□□ -0.48
PDCD4-201ENST00000280154 DIEXFQ68CQ4 756 aaKnown RBP12.03□□□□□ -0.48
PDCD4-201ENST00000280154 SPATA31A6Q5VVP1 1343 aa12.03□□□□□ -0.48
PDCD4-201ENST00000280154 KDM3BQ7LBC6 1761 aa12.02□□□□□ -0.48
PDCD4-201ENST00000280154 ESCO1Q5FWF5 840 aa12.02□□□□□ -0.48
PDCD4-201ENST00000280154 ARHGEF25Q86VW2 580 aa12.02□□□□□ -0.48
PDCD4-201ENST00000280154 NLRP13Q86W25 1043 aa12.02□□□□□ -0.48
PDCD4-201ENST00000280154 KCNH5Q8NCM2 988 aa12.02□□□□□ -0.48
PDCD4-201ENST00000280154 ZBTB9Q96C00 473 aa12.02□□□□□ -0.48
PDCD4-201ENST00000280154 GLI3P10071 1580 aa12.02□□□□□ -0.49
PDCD4-201ENST00000280154 EP400NLQ6ZTU2 488 aa12.02□□□□□ -0.49
PDCD4-201ENST00000280154 KIF4AO95239 1232 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms